RNA–Protein interactions for RNA: ENST00000339113.8

ATAD3A-201, Transcript of ATPase family, AAA domain containing 3A, humanhuman

TSL 2

Gene ATAD3A, Length 2,330 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3A-201ENST00000339113 ZFP36L2P47974 494 aaKnown RBP16.69■□□□□ 0.26
ATAD3A-201ENST00000339113 UFM1P61960 85 aa16.69■□□□□ 0.26
ATAD3A-201ENST00000339113 ERVK-8P63133 956 aa16.69■□□□□ 0.26
ATAD3A-201ENST00000339113 ADGRE1Q14246 886 aa16.69■□□□□ 0.26
ATAD3A-201ENST00000339113 ATP6AP1LQ52LC2 224 aa16.69■□□□□ 0.26
ATAD3A-201ENST00000339113 SGO1Q5FBB7 561 aa16.69■□□□□ 0.26
ATAD3A-201ENST00000339113 CFAP206Q8IYR0 622 aa16.69■□□□□ 0.26
ATAD3A-201ENST00000339113 HDDC3Q8N4P3 179 aa16.69■□□□□ 0.26
ATAD3A-201ENST00000339113 GLMNQ92990 594 aa16.69■□□□□ 0.26
ATAD3A-201ENST00000339113 MTFMTQ96DP5 389 aaKnown RBP16.69■□□□□ 0.26
ATAD3A-201ENST00000339113 LRCH3Q96II8 777 aa16.69■□□□□ 0.26
ATAD3A-201ENST00000339113 CCT7Q99832 543 aa16.69■□□□□ 0.26
ATAD3A-201ENST00000339113 MKRN2Q9H000 416 aaKnown RBP16.69■□□□□ 0.26
ATAD3A-201ENST00000339113 SLC6A17Q9H1V8 727 aa16.69■□□□□ 0.26
ATAD3A-201ENST00000339113 EPHX3Q9H6B9 360 aa16.69■□□□□ 0.26
ATAD3A-201ENST00000339113 MAP10Q9P2G4 905 aa16.69■□□□□ 0.26
ATAD3A-201ENST00000339113 PRKAB1Q9Y478 270 aa16.69■□□□□ 0.26
ATAD3A-201ENST00000339113 BRWD1Q9NSI6 2320 aa16.69■□□□□ 0.26
ATAD3A-201ENST00000339113 MRASO14807 208 aa16.69■□□□□ 0.26
ATAD3A-201ENST00000339113 PCDH8O95206 1070 aa16.69■□□□□ 0.26
ATAD3A-201ENST00000339113 PGM3O95394 542 aa16.69■□□□□ 0.26
ATAD3A-201ENST00000339113 TNFRSF4P43489 277 aa16.69■□□□□ 0.26
ATAD3A-201ENST00000339113 BDKRB1P46663 353 aa16.69■□□□□ 0.26
ATAD3A-201ENST00000339113 HNMTP50135 292 aa16.69■□□□□ 0.26
ATAD3A-201ENST00000339113 PFN3P60673 137 aa16.69■□□□□ 0.26
ATAD3A-201ENST00000339113 PSME3P61289 254 aa16.69■□□□□ 0.26
ATAD3A-201ENST00000339113 BCL7AQ4VC05 210 aa16.69■□□□□ 0.26
ATAD3A-201ENST00000339113 RFTN2Q52LD8 501 aaPredicted RBP16.69■□□□□ 0.26
ATAD3A-201ENST00000339113 MTSS1LQ765P7 747 aa16.69■□□□□ 0.26
ATAD3A-201ENST00000339113 SLC22A15Q8IZD6 547 aa16.69■□□□□ 0.26
ATAD3A-201ENST00000339113 SMRP1Q8NCR6 262 aa16.69■□□□□ 0.26
ATAD3A-201ENST00000339113 CSGALNACT1Q8TDX6 532 aa16.69■□□□□ 0.26
ATAD3A-201ENST00000339113 PRUNE2Q8WUY3 3088 aa16.69■□□□□ 0.26
ATAD3A-201ENST00000339113 NUDT8Q8WV74 236 aa16.69■□□□□ 0.26
ATAD3A-201ENST00000339113 LZICQ8WZA0 190 aa16.69■□□□□ 0.26
ATAD3A-201ENST00000339113 MPP4Q96JB8 637 aa16.69■□□□□ 0.26
ATAD3A-201ENST00000339113 FAM210AQ96ND0 272 aa16.69■□□□□ 0.26
ATAD3A-201ENST00000339113 SLC39A3Q9BRY0 314 aa16.69■□□□□ 0.26
ATAD3A-201ENST00000339113 PFDN4Q9NQP4 134 aa16.69■□□□□ 0.26
ATAD3A-201ENST00000339113 UBAP1Q9NZ09 502 aa16.69■□□□□ 0.26
ATAD3A-201ENST00000339113 EPS15L1Q9UBC2 864 aa16.69■□□□□ 0.26
ATAD3A-201ENST00000339113 RIMS3Q9UJD0 308 aa16.69■□□□□ 0.26
ATAD3A-201ENST00000339113 CNOT11Q9UKZ1 510 aaKnown RBP16.69■□□□□ 0.26
ATAD3A-201ENST00000339113 E7ENX8 843 aa16.68■□□□□ 0.26
ATAD3A-201ENST00000339113 ANHXE9PGG2 379 aa16.68■□□□□ 0.26
ATAD3A-201ENST00000339113 XRCC1P18887 633 aaPredicted RBP16.68■□□□□ 0.26
ATAD3A-201ENST00000339113 AP1S2P56377 157 aa16.68■□□□□ 0.26
ATAD3A-201ENST00000339113 HMGCS1Q01581 520 aa16.68■□□□□ 0.26
ATAD3A-201ENST00000339113 NR6A1Q15406 480 aa16.68■□□□□ 0.26
ATAD3A-201ENST00000339113 ADRM1Q16186 407 aa16.68■□□□□ 0.26
ATAD3A-201ENST00000339113 CPSF6Q16630 551 aaKnown RBP eCLIP16.68■□□□□ 0.26
ATAD3A-201ENST00000339113 BLOC1S3Q6QNY0 202 aa16.68■□□□□ 0.26
ATAD3A-201ENST00000339113 TCAIMQ8N3R3 496 aa16.68■□□□□ 0.26
ATAD3A-201ENST00000339113 FAM156AQ8NDB6 213 aa16.68■□□□□ 0.26
ATAD3A-201ENST00000339113 NMD3Q96D46 503 aaKnown RBP16.68■□□□□ 0.26
ATAD3A-201ENST00000339113 LRGUKQ96M69 825 aa16.68■□□□□ 0.26
ATAD3A-201ENST00000339113 LGR4Q9BXB1 951 aa16.68■□□□□ 0.26
ATAD3A-201ENST00000339113 BRINP2Q9C0B6 783 aa16.68■□□□□ 0.26
ATAD3A-201ENST00000339113 ACTR8Q9H981 624 aa16.68■□□□□ 0.26
ATAD3A-201ENST00000339113 TRPS1Q9UHF7 1281 aa16.68■□□□□ 0.26
ATAD3A-201ENST00000339113 DMTF1Q9Y222 760 aa16.68■□□□□ 0.26
ATAD3A-201ENST00000339113 F5P12259 2224 aa16.68■□□□□ 0.26
ATAD3A-201ENST00000339113 MANBAO00462 879 aa16.68■□□□□ 0.26
ATAD3A-201ENST00000339113 NPC1O15118 1278 aa16.68■□□□□ 0.26
ATAD3A-201ENST00000339113 CLDN9O95484 217 aa16.68■□□□□ 0.26
ATAD3A-201ENST00000339113 IL12AP29459 219 aa16.68■□□□□ 0.26
ATAD3A-201ENST00000339113 RPS14P62263 151 aaKnown RBP16.68■□□□□ 0.26
ATAD3A-201ENST00000339113 MS4A2Q01362 244 aa16.68■□□□□ 0.26
ATAD3A-201ENST00000339113 WSCD2Q2TBF2 565 aa16.68■□□□□ 0.26
ATAD3A-201ENST00000339113 AP5B1Q2VPB7 878 aa16.68■□□□□ 0.26
ATAD3A-201ENST00000339113 TMEM196Q5HYL7 178 aa16.68■□□□□ 0.26
ATAD3A-201ENST00000339113 CRTC3Q6UUV7 619 aa16.68■□□□□ 0.26
ATAD3A-201ENST00000339113 LRRC70Q7Z2Q7 622 aa16.68■□□□□ 0.26
ATAD3A-201ENST00000339113 INTS7Q9NVH2 962 aaKnown RBP16.68■□□□□ 0.26
ATAD3A-201ENST00000339113 ZNF490Q9ULM2 529 aaPredicted RBP16.68■□□□□ 0.26
ATAD3A-201ENST00000339113 GMEB1Q9Y692 573 aa16.68■□□□□ 0.26
ATAD3A-201ENST00000339113 AP4B1Q9Y6B7 739 aa16.68■□□□□ 0.26
ATAD3A-201ENST00000339113 DENND4AQ7Z401 1863 aa16.68■□□□□ 0.26
ATAD3A-201ENST00000339113 TICRRQ7Z2Z1 1910 aa16.68■□□□□ 0.26
ATAD3A-201ENST00000339113 ULK1O75385 1050 aa16.67■□□□□ 0.26
ATAD3A-201ENST00000339113 RNASEH2AO75792 299 aaKnown RBP16.67■□□□□ 0.26
ATAD3A-201ENST00000339113 POP7O75817 140 aaKnown RBP16.67■□□□□ 0.26
ATAD3A-201ENST00000339113 EGFP01133 1207 aa16.67■□□□□ 0.26
ATAD3A-201ENST00000339113 PCCBP05166 539 aa16.67■□□□□ 0.26
ATAD3A-201ENST00000339113 CTHP32929 405 aa16.67■□□□□ 0.26
ATAD3A-201ENST00000339113 YBX1P67809 324 aaKnown RBP16.67■□□□□ 0.26
ATAD3A-201ENST00000339113 PLA2G4EQ3MJ16 856 aa16.67■□□□□ 0.26
ATAD3A-201ENST00000339113 IER5LQ5T953 404 aa16.67■□□□□ 0.26
ATAD3A-201ENST00000339113 PNCKQ6P2M8 343 aa16.67■□□□□ 0.26
ATAD3A-201ENST00000339113 RBM44Q6ZP01 1051 aaKnown RBP16.67■□□□□ 0.26
ATAD3A-201ENST00000339113 VPS33AQ96AX1 596 aa16.67■□□□□ 0.26
ATAD3A-201ENST00000339113 FBXL8Q96CD0 374 aa16.67■□□□□ 0.26
ATAD3A-201ENST00000339113 COX14Q96I36 57 aa16.67■□□□□ 0.26
ATAD3A-201ENST00000339113 TIMMDC1Q9NPL8 285 aa16.67■□□□□ 0.26
ATAD3A-201ENST00000339113 MBNL1Q9NR56 388 aaKnown RBP16.67■□□□□ 0.26
ATAD3A-201ENST00000339113 ARHGAP10A1A4S6 786 aa16.67■□□□□ 0.26
ATAD3A-201ENST00000339113 PABPN1LA6NDY0 278 aaKnown RBP16.67■□□□□ 0.26
ATAD3A-201ENST00000339113 H0YJX3 145 aa16.67■□□□□ 0.26
ATAD3A-201ENST00000339113 H3BM21 787 aa16.67■□□□□ 0.26
ATAD3A-201ENST00000339113 H3BQ06 376 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms