RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 FDXRP22570 491 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 CD70P32970 193 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 ARSFP54793 590 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 NTHL1P78549 312 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 DPY19L3Q6ZPD9 716 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 CYP2U1Q7Z449 544 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 CACTIN-AS1Q8N1I8 211 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 STK40Q8N2I9 435 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 PROKR1Q8TCW9 393 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 CD200R1Q8TD46 325 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 ATOH8Q96SQ7 321 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 CHCHD6Q9BRQ6 235 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 EQTNQ9NQ60 294 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 HCFC1R1Q9NWW0 138 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 SLC13A4Q9UKG4 626 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 PCTPQ9UKL6 214 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 PRELID1Q9Y255 219 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 PCDHB3Q9Y5E6 796 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 SIP14410 1827 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 TRIM43BA6NCK2 446 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 H3BNH8 94 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 BCKDKO14874 412 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 ATE1O95260 518 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 MMP2P08253 660 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 ZNF24P17028 368 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 CYP2A7P20853 494 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 IL12AP29459 219 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 GRK3P35626 688 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 ETV3P41162 512 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 BDKRB1P46663 353 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 MAPKAPK2P49137 400 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 PCYT1AP49585 367 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 HK3P52790 923 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 CDH12P55289 794 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 RPS26P62854 115 aaKnown RBP8.04□□□□□ -1.12
HPS4-201ENST00000336873 ARSIQ5FYB1 569 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 TTC23Q5W5X9 447 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 BHLHA9Q7RTU4 235 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 TCF25Q9BQ70 676 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 LINC00597Q9H2U6 94 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 IL26Q9NPH9 171 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 CCM2LQ9NUG4 571 aaPredicted RBP8.04□□□□□ -1.12
HPS4-201ENST00000336873 SPG21Q9NZD8 308 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 DUSP12Q9UNI6 340 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 PDE10AQ9Y233 779 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 LCTP09848 1927 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 TBC1D3BA6NDS4 549 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 GLOD5A6NK44 160 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 FKTNO75072 461 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 VIPP01282 170 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 SLC10A3P09131 477 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 DNAJB13P59910 316 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 SPIBQ01892 262 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 CAMK2GQ13555 558 aaPredicted RBP8.04□□□□□ -1.12
HPS4-201ENST00000336873 MBTPS1Q14703 1052 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 TYW3Q6IPR3 259 aaKnown RBP8.04□□□□□ -1.12
HPS4-201ENST00000336873 KLHL35Q6PF15 583 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 Q6ZSR9 355 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 MEX3DQ86XN8 651 aaKnown RBP8.04□□□□□ -1.12
HPS4-201ENST00000336873 NPAS4Q8IUM7 802 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 TMEM199Q8N511 208 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 CHST14Q8NCH0 376 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 SLCO4A1Q96BD0 722 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 ART5Q96L15 291 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 ZNF558Q96NG5 402 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 NODALQ96S42 347 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 HEPHQ9BQS7 1158 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 OSBPL6Q9BZF3 934 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 RHBGQ9H310 441 aa8.04□□□□□ -1.12
HPS4-201ENST00000336873 PTPRFP10586 1907 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 BBIP1A8MTZ0 92 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 K7EPI3 171 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 M0QZQ0 153 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 CLIC1O00299 241 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 RTCAO00442 366 aaKnown RBP8.03□□□□□ -1.12
HPS4-201ENST00000336873 SOX14O95416 240 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 EOMESO95936 686 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 PDYNP01213 254 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 C8AP07357 584 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 CDK4P11802 303 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 CYBAP13498 195 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 ENGP17813 658 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 OGNP20774 298 aaKnown RBP8.03□□□□□ -1.12
HPS4-201ENST00000336873 HOXD9P28356 352 aaPredicted RBP8.03□□□□□ -1.12
HPS4-201ENST00000336873 MAT2AP31153 395 aaKnown RBP8.03□□□□□ -1.12
HPS4-201ENST00000336873 SPAM1P38567 509 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 PLA2G16P53816 162 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 ADAM17P78536 824 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 NFATC2Q13469 925 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 CMPK2Q5EBM0 449 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 TXNDC11Q6PKC3 985 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 C1orf52Q8N6N3 182 aaKnown RBP8.03□□□□□ -1.12
HPS4-201ENST00000336873 HJURPQ8NCD3 748 aaPredicted RBP8.03□□□□□ -1.12
HPS4-201ENST00000336873 HMGCLL1Q8TB92 370 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 NELL1Q92832 810 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 HPS1Q92902 700 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 C8orf48Q96LL4 319 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 ZNF599Q96NL3 588 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 IL17FQ96PD4 163 aa8.03□□□□□ -1.12
HPS4-201ENST00000336873 SH3GL1Q99961 368 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms