RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 ZNF358Q9NW07 568 aa10.16□□□□□ -0.78
SPTBN1-201ENST00000333896 PCDHGB7Q9Y5F8 929 aa10.16□□□□□ -0.78
SPTBN1-201ENST00000333896 WNT7AO00755 349 aa10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 EI24O14681 340 aa10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 ZNF16P17020 682 aaPredicted RBP10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 CXCR2P25025 360 aa10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 VEGFCP49767 419 aa10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 POLR2LP62875 67 aaKnown RBP10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 STK11Q15831 433 aa10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 CPNE9Q8IYJ1 553 aa10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 Q8N402 240 aa10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 GTF2H4Q92759 462 aa10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 ZNF670Q9BS34 389 aa10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 GPR89AB7ZAQ6 455 aa10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 SHOXO15266 292 aa10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 GPR89BP0CG08 455 aa10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 EVI2BP34910 448 aa10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 NDUFA9Q16795 377 aa10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 PROSER3Q2NL68 480 aa10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 ZNF529Q6P280 563 aa10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 TREML1Q86YW5 311 aa10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 PIAS4Q8N2W9 510 aaPredicted RBP10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 COA1Q9GZY4 146 aa10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 DCP1AQ9NPI6 582 aaPredicted RBP10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 ASF1AQ9Y294 204 aa10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 URADA6NGE7 173 aa10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 MEN1O00255 615 aa10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 HSPA12AO43301 675 aa10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 PROS1P07225 676 aa10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 RPS5P46782 204 aaKnown RBP10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 MTMR2Q13614 643 aa10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 DSG2Q14126 1118 aa10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 FNDC3BQ53EP0 1204 aaKnown RBP10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 ALG10BQ5I7T1 473 aa10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 AGAP7PQ5VUJ5 663 aa10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 LYPLAL1Q5VWZ2 237 aa10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 ASB18Q6ZVZ8 466 aa10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 CPB2Q96IY4 423 aa10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 TMEM209Q96SK2 561 aa10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 TP63Q9H3D4 680 aaPredicted RBP10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 NYAP2Q9P242 653 aa10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 SCP2D1Q9UJQ7 156 aa10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 TNS3Q68CZ2 1445 aa10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 RAMP2O60895 175 aa10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 AKAP3O75969 853 aa10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 OAZ2O95190 189 aa10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 HK3P52790 923 aa10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 EPHB3P54753 998 aa10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 PAN2Q504Q3 1202 aaKnown RBP10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 CARD16Q5EG05 197 aa10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 FAM83HQ6ZRV2 1179 aaPredicted RBP10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 WDR53Q7Z5U6 358 aaPredicted RBP10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 OR7D4Q8NG98 312 aa10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 OR52J3Q8NH60 311 aa10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 RRNAD1Q96FB5 475 aaKnown RBP10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 BTF3L4Q96K17 158 aa10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 TDRD3Q9H7E2 651 aaKnown RBP10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 NOP16Q9Y3C1 178 aaKnown RBP10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 ZNF182P17025 639 aaPredicted RBP10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 HTR7P34969 479 aa10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 TTPAP49638 278 aa10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 MRPS10P82664 201 aaKnown RBP10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 MAPK14Q16539 360 aa10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 APOBEC3FQ8IUX4 373 aaKnown RBP10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 NLGN1Q8N2Q7 840 aa10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 SCGB1C1Q8TD33 95 aa10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 SECISBP2Q96T21 854 aaKnown RBP10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 AGAP2Q99490 1192 aa10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 OPA3Q9H6K4 179 aa10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 NARFQ9UHQ1 456 aa10.15□□□□□ -0.78
SPTBN1-201ENST00000333896 LRRN3E7EW58 273 aa10.15□□□□□ -0.79
SPTBN1-201ENST00000333896 INMT-MINDY4F8WBC2 141 aa10.15□□□□□ -0.79
SPTBN1-201ENST00000333896 CHRNA1P02708 482 aa10.15□□□□□ -0.79
SPTBN1-201ENST00000333896 GSTM4Q03013 218 aa10.15□□□□□ -0.79
SPTBN1-201ENST00000333896 CERCAMQ5T4B2 595 aa10.15□□□□□ -0.79
SPTBN1-201ENST00000333896 ANKRD54Q6NXT1 300 aa10.15□□□□□ -0.79
SPTBN1-201ENST00000333896 SCIMPQ6UWF3 145 aa10.15□□□□□ -0.79
SPTBN1-201ENST00000333896 TMED4Q7Z7H5 227 aa10.15□□□□□ -0.79
SPTBN1-201ENST00000333896 LDHDQ86WU2 507 aa10.15□□□□□ -0.79
SPTBN1-201ENST00000333896 CSGALNACT1Q8TDX6 532 aa10.15□□□□□ -0.79
SPTBN1-201ENST00000333896 CCDC74BQ96LY2 380 aa10.15□□□□□ -0.79
SPTBN1-201ENST00000333896 LRRN3Q9H3W5 708 aa10.15□□□□□ -0.79
SPTBN1-201ENST00000333896 PRMT7Q9NVM4 692 aaPredicted RBP10.15□□□□□ -0.79
SPTBN1-201ENST00000333896 COL20A1Q9P218 1284 aa10.15□□□□□ -0.79
SPTBN1-201ENST00000333896 CDH10Q9Y6N8 788 aa10.15□□□□□ -0.79
SPTBN1-201ENST00000333896 UNC13CQ8NB66 2214 aa10.15□□□□□ -0.79
SPTBN1-201ENST00000333896 ERBB2P04626 1255 aa10.15□□□□□ -0.79
SPTBN1-201ENST00000333896 ANXA8P13928 327 aa10.15□□□□□ -0.79
SPTBN1-201ENST00000333896 HADHBP55084 474 aaKnown RBP10.15□□□□□ -0.79
SPTBN1-201ENST00000333896 RNF151Q2KHN1 245 aa10.15□□□□□ -0.79
SPTBN1-201ENST00000333896 SEZ6Q53EL9 994 aa10.15□□□□□ -0.79
SPTBN1-201ENST00000333896 OR13J1Q8NGT2 312 aa10.15□□□□□ -0.79
SPTBN1-201ENST00000333896 TRPS1Q9UHF7 1281 aa10.15□□□□□ -0.79
SPTBN1-201ENST00000333896 CNTNAP2Q9UHC6 1331 aa10.15□□□□□ -0.79
SPTBN1-201ENST00000333896 TRIP12Q14669 1992 aaPredicted RBP10.14□□□□□ -0.79
SPTBN1-201ENST00000333896 ZNF878C9JN71 531 aa10.14□□□□□ -0.79
SPTBN1-201ENST00000333896 TPST2O60704 377 aa10.14□□□□□ -0.79
SPTBN1-201ENST00000333896 GTF2F2P13984 249 aa10.14□□□□□ -0.79
SPTBN1-201ENST00000333896 KDELR1P24390 212 aa10.14□□□□□ -0.79
SPTBN1-201ENST00000333896 SBK1Q52WX2 424 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms