RNA–Protein interactions for RNA: ENST00000332797.10

CCDC28A-201, Transcript of coiled-coil domain containing 28A, humanhuman

TSL 1 (best) BASIC

Gene CCDC28A, Length 1,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-201ENST00000332797 SEMA5BQ9P283 1151 aa15.37■□□□□ 0.05
CCDC28A-201ENST00000332797 WDFY3Q8IZQ1 3526 aa15.36■□□□□ 0.05
CCDC28A-201ENST00000332797 PABPN1LA6NDY0 278 aaKnown RBP15.36■□□□□ 0.05
CCDC28A-201ENST00000332797 SLC9B1P1A6NJY1 282 aa15.36■□□□□ 0.05
CCDC28A-201ENST00000332797 POC1B-GALNT4F8VUJ3 575 aa15.36■□□□□ 0.05
CCDC28A-201ENST00000332797 SLC16A5O15375 505 aa15.36■□□□□ 0.05
CCDC28A-201ENST00000332797 DXOO77932 396 aaKnown RBP15.36■□□□□ 0.05
CCDC28A-201ENST00000332797 ZBTB11O95625 1053 aaPredicted RBP15.36■□□□□ 0.05
CCDC28A-201ENST00000332797 INHBAP08476 426 aa15.36■□□□□ 0.05
CCDC28A-201ENST00000332797 ABHD2P08910 425 aa15.36■□□□□ 0.05
CCDC28A-201ENST00000332797 NELFEP18615 380 aaKnown RBP15.36■□□□□ 0.05
CCDC28A-201ENST00000332797 RAB10P61026 200 aa15.36■□□□□ 0.05
CCDC28A-201ENST00000332797 SH3BP2P78314 561 aa15.36■□□□□ 0.05
CCDC28A-201ENST00000332797 MROH9Q5TGP6 573 aa15.36■□□□□ 0.05
CCDC28A-201ENST00000332797 IGF2-ASQ6U949 168 aa15.36■□□□□ 0.05
CCDC28A-201ENST00000332797 CARFQ8N187 725 aa15.36■□□□□ 0.05
CCDC28A-201ENST00000332797 BMPERQ8N8U9 685 aa15.36■□□□□ 0.05
CCDC28A-201ENST00000332797 MCOLN3Q8TDD5 553 aa15.36■□□□□ 0.05
CCDC28A-201ENST00000332797 ANKRD49Q8WVL7 239 aa15.36■□□□□ 0.05
CCDC28A-201ENST00000332797 SLC44A1Q8WWI5 657 aa15.36■□□□□ 0.05
CCDC28A-201ENST00000332797 ZCCHC14Q8WYQ9 949 aaKnown RBP15.36■□□□□ 0.05
CCDC28A-201ENST00000332797 DLG3Q92796 817 aa15.36■□□□□ 0.05
CCDC28A-201ENST00000332797 USP7Q93009 1102 aa15.36■□□□□ 0.05
CCDC28A-201ENST00000332797 PDLIM5Q96HC4 596 aaKnown RBP15.36■□□□□ 0.05
CCDC28A-201ENST00000332797 SLC41A2Q96JW4 573 aa15.36■□□□□ 0.05
CCDC28A-201ENST00000332797 PAFAH2Q99487 392 aa15.36■□□□□ 0.05
CCDC28A-201ENST00000332797 PITPNM3Q9BZ71 974 aa15.36■□□□□ 0.05
CCDC28A-201ENST00000332797 THSD1Q9NS62 852 aa15.36■□□□□ 0.05
CCDC28A-201ENST00000332797 SIDT1Q9NXL6 827 aaKnown RBP15.36■□□□□ 0.05
CCDC28A-201ENST00000332797 SLC39A1Q9NY26 324 aa15.36■□□□□ 0.05
CCDC28A-201ENST00000332797 PDE10AQ9Y233 779 aa15.36■□□□□ 0.05
CCDC28A-201ENST00000332797 IKBKGQ9Y6K9 419 aa15.36■□□□□ 0.05
CCDC28A-201ENST00000332797 ADAMTS20P59510 1910 aa15.36■□□□□ 0.05
CCDC28A-201ENST00000332797 EXOC1LA0A1B0GW35 172 aa15.35■□□□□ 0.05
CCDC28A-201ENST00000332797 NPEPPSL1A6NEC2 478 aa15.35■□□□□ 0.05
CCDC28A-201ENST00000332797 B4E171 279 aa15.35■□□□□ 0.05
CCDC28A-201ENST00000332797 SLC16A8O95907 504 aa15.35■□□□□ 0.05
CCDC28A-201ENST00000332797 PVRP15151 417 aa15.35■□□□□ 0.05
CCDC28A-201ENST00000332797 ST6GAL1P15907 406 aa15.35■□□□□ 0.05
CCDC28A-201ENST00000332797 TSPAN7P41732 249 aa15.35■□□□□ 0.05
CCDC28A-201ENST00000332797 MLLT3P42568 568 aaPredicted RBP15.35■□□□□ 0.05
CCDC28A-201ENST00000332797 MSH2P43246 934 aa15.35■□□□□ 0.05
CCDC28A-201ENST00000332797 PNLIPRP1P54315 467 aa15.35■□□□□ 0.05
CCDC28A-201ENST00000332797 HSD11B2P80365 405 aa15.35■□□□□ 0.05
CCDC28A-201ENST00000332797 FOXM1Q08050 763 aa15.35■□□□□ 0.05
CCDC28A-201ENST00000332797 TSTA3Q13630 321 aaPredicted RBP15.35■□□□□ 0.05
CCDC28A-201ENST00000332797 FASTKQ14296 549 aaKnown RBP15.35■□□□□ 0.05
CCDC28A-201ENST00000332797 KCNAB1Q14722 419 aa15.35■□□□□ 0.05
CCDC28A-201ENST00000332797 ZKSCAN8Q15776 578 aaPredicted RBP15.35■□□□□ 0.05
CCDC28A-201ENST00000332797 CYP2A13Q16696 494 aa15.35■□□□□ 0.05
CCDC28A-201ENST00000332797 ERCC6LQ2NKX8 1250 aa15.35■□□□□ 0.05
CCDC28A-201ENST00000332797 TBC1D25Q3MII6 688 aa15.35■□□□□ 0.05
CCDC28A-201ENST00000332797 RAPH1Q70E73 1250 aa15.35■□□□□ 0.05
CCDC28A-201ENST00000332797 CMC1Q7Z7K0 106 aa15.35■□□□□ 0.05
CCDC28A-201ENST00000332797 KMT5CQ86Y97 462 aa15.35■□□□□ 0.05
CCDC28A-201ENST00000332797 FLVCR1-AS1Q8TAF5 88 aa15.35■□□□□ 0.05
CCDC28A-201ENST00000332797 HMGCLL1Q8TB92 370 aa15.35■□□□□ 0.05
CCDC28A-201ENST00000332797 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.35■□□□□ 0.05
CCDC28A-201ENST00000332797 PMEPA1Q969W9 287 aa15.35■□□□□ 0.05
CCDC28A-201ENST00000332797 SLC22A18Q96BI1 424 aa15.35■□□□□ 0.05
CCDC28A-201ENST00000332797 CNTNAP3BQ96NU0 1288 aa15.35■□□□□ 0.05
CCDC28A-201ENST00000332797 TAAR9Q96RI9 348 aa15.35■□□□□ 0.05
CCDC28A-201ENST00000332797 CTRCQ99895 268 aa15.35■□□□□ 0.05
CCDC28A-201ENST00000332797 SLC12A9Q9BXP2 914 aa15.35■□□□□ 0.05
CCDC28A-201ENST00000332797 CNTNAP3Q9BZ76 1288 aa15.35■□□□□ 0.05
CCDC28A-201ENST00000332797 UNKQ9C0B0 810 aaKnown RBP15.35■□□□□ 0.05
CCDC28A-201ENST00000332797 PARVBQ9HBI1 364 aa15.35■□□□□ 0.05
CCDC28A-201ENST00000332797 DKK4Q9UBT3 224 aa15.35■□□□□ 0.05
CCDC28A-201ENST00000332797 IKZF3Q9UKT9 509 aa15.35■□□□□ 0.05
CCDC28A-201ENST00000332797 FREM2Q5SZK8 3169 aa15.35■□□□□ 0.05
CCDC28A-201ENST00000332797 A0A0J9YY10 115 aa15.34■□□□□ 0.05
CCDC28A-201ENST00000332797 TMEM8BA6NDV4 472 aa15.34■□□□□ 0.05
CCDC28A-201ENST00000332797 ZNF839A8K0R7 811 aa15.34■□□□□ 0.05
CCDC28A-201ENST00000332797 CDRT15L2A8MXV6 281 aa15.34■□□□□ 0.05
CCDC28A-201ENST00000332797 PRAMEF10O60809 474 aa15.34■□□□□ 0.05
CCDC28A-201ENST00000332797 CAPNS1P04632 268 aa15.34■□□□□ 0.05
CCDC28A-201ENST00000332797 HIST1H2AGP0C0S8 130 aaPredicted RBP15.34■□□□□ 0.05
CCDC28A-201ENST00000332797 EBLN1P0CF75 366 aa15.34■□□□□ 0.05
CCDC28A-201ENST00000332797 CCDC166P0CW27 439 aa15.34■□□□□ 0.05
CCDC28A-201ENST00000332797 ERGP11308 486 aa15.34■□□□□ 0.05
CCDC28A-201ENST00000332797 HIST1H2ADP20671 130 aa15.34■□□□□ 0.05
CCDC28A-201ENST00000332797 PSMB5P28074 263 aa15.34■□□□□ 0.05
CCDC28A-201ENST00000332797 HSD17B2P37059 387 aa15.34■□□□□ 0.05
CCDC28A-201ENST00000332797 MC2RQ01718 297 aa15.34■□□□□ 0.05
CCDC28A-201ENST00000332797 ARHGAP19Q14CB8 494 aa15.34■□□□□ 0.05
CCDC28A-201ENST00000332797 PHKG1Q16816 387 aa15.34■□□□□ 0.05
CCDC28A-201ENST00000332797 SLC5A12Q1EHB4 618 aa15.34■□□□□ 0.05
CCDC28A-201ENST00000332797 TMEM164Q5U3C3 297 aa15.34■□□□□ 0.05
CCDC28A-201ENST00000332797 MBOAT1Q6ZNC8 495 aa15.34■□□□□ 0.05
CCDC28A-201ENST00000332797 TAOK1Q7L7X3 1001 aa15.34■□□□□ 0.05
CCDC28A-201ENST00000332797 FAM20CQ8IXL6 584 aa15.34■□□□□ 0.05
CCDC28A-201ENST00000332797 SYTL1Q8IYJ3 562 aa15.34■□□□□ 0.05
CCDC28A-201ENST00000332797 SPATA6LQ8N4H0 392 aa15.34■□□□□ 0.05
CCDC28A-201ENST00000332797 PPFIBP2Q8ND30 876 aa15.34■□□□□ 0.05
CCDC28A-201ENST00000332797 ZNF480Q8WV37 535 aa15.34■□□□□ 0.05
CCDC28A-201ENST00000332797 HIST1H2AHQ96KK5 128 aa15.34■□□□□ 0.05
CCDC28A-201ENST00000332797 ZNF578Q96N58 590 aaPredicted RBP15.34■□□□□ 0.05
CCDC28A-201ENST00000332797 TRAPPC9Q96Q05 1148 aa15.34■□□□□ 0.05
CCDC28A-201ENST00000332797 OR6C1Q96RD1 312 aa15.34■□□□□ 0.05
CCDC28A-201ENST00000332797 HIST1H2AJQ99878 128 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms