RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 LRRC26Q2I0M4 334 aa14.19□□□□□ -0.14
TPM3-206ENST00000330188 LRIF1Q5T3J3 769 aa14.19□□□□□ -0.14
TPM3-206ENST00000330188 TMEM215Q68D42 235 aa14.19□□□□□ -0.14
TPM3-206ENST00000330188 BRAT1Q6PJG6 821 aa14.19□□□□□ -0.14
TPM3-206ENST00000330188 ABRAXAS1Q6UWZ7 409 aa14.19□□□□□ -0.14
TPM3-206ENST00000330188 HSD11B1LQ7Z5J1 315 aa14.19□□□□□ -0.14
TPM3-206ENST00000330188 NECAB2Q7Z6G3 386 aa14.19□□□□□ -0.14
TPM3-206ENST00000330188 FBXO30Q8TB52 745 aa14.19□□□□□ -0.14
TPM3-206ENST00000330188 SCAMP4Q969E2 229 aa14.19□□□□□ -0.14
TPM3-206ENST00000330188 CMTM7Q96FZ5 175 aa14.19□□□□□ -0.14
TPM3-206ENST00000330188 SH3GL1Q99961 368 aa14.19□□□□□ -0.14
TPM3-206ENST00000330188 TBCDQ9BTW9 1192 aa14.19□□□□□ -0.14
TPM3-206ENST00000330188 KAT8Q9H7Z6 458 aaKnown RBP14.19□□□□□ -0.14
TPM3-206ENST00000330188 SERHLQ9NQF3 203 aa14.19□□□□□ -0.14
TPM3-206ENST00000330188 SPHK2Q9NRA0 654 aa14.19□□□□□ -0.14
TPM3-206ENST00000330188 RSL24D1Q9UHA3 163 aaKnown RBP14.19□□□□□ -0.14
TPM3-206ENST00000330188 MAN2B2Q9Y2E5 1009 aa14.19□□□□□ -0.14
TPM3-206ENST00000330188 PCDHB14Q9Y5E9 798 aa14.19□□□□□ -0.14
TPM3-206ENST00000330188 CXCR6O00574 342 aa14.18□□□□□ -0.14
TPM3-206ENST00000330188 CYP2A6P11509 494 aaPredicted RBP14.18□□□□□ -0.14
TPM3-206ENST00000330188 EPHA5P54756 1037 aa14.18□□□□□ -0.14
TPM3-206ENST00000330188 ARSFP54793 590 aa14.18□□□□□ -0.14
TPM3-206ENST00000330188 DMC1Q14565 340 aa14.18□□□□□ -0.14
TPM3-206ENST00000330188 OTUD3Q5T2D3 398 aaPredicted RBP14.18□□□□□ -0.14
TPM3-206ENST00000330188 ELMSAN1Q6PJG2 1045 aa14.18□□□□□ -0.14
TPM3-206ENST00000330188 OTOP2Q7RTS6 562 aa14.18□□□□□ -0.14
TPM3-206ENST00000330188 MICU2Q8IYU8 434 aa14.18□□□□□ -0.14
TPM3-206ENST00000330188 PHACTR4Q8IZ21 702 aa14.18□□□□□ -0.14
TPM3-206ENST00000330188 LEMD2Q8NC56 503 aa14.18□□□□□ -0.14
TPM3-206ENST00000330188 OR52E4Q8NGH9 312 aa14.18□□□□□ -0.14
TPM3-206ENST00000330188 DNAJB8Q8NHS0 232 aa14.18□□□□□ -0.14
TPM3-206ENST00000330188 ADAMTS16Q8TE57 1224 aa14.18□□□□□ -0.14
TPM3-206ENST00000330188 CPPED1Q9BRF8 314 aaPredicted RBP14.18□□□□□ -0.14
TPM3-206ENST00000330188 KCNH6Q9H252 994 aa14.18□□□□□ -0.14
TPM3-206ENST00000330188 LINC00597Q9H2U6 94 aa14.18□□□□□ -0.14
TPM3-206ENST00000330188 FAM83DQ9H4H8 585 aa14.18□□□□□ -0.14
TPM3-206ENST00000330188 LIMD1Q9UGP4 676 aa14.18□□□□□ -0.14
TPM3-206ENST00000330188 SLC22A14Q9Y267 594 aa14.18□□□□□ -0.14
TPM3-206ENST00000330188 AP3M1Q9Y2T2 418 aa14.18□□□□□ -0.14
TPM3-206ENST00000330188 A0A096LPI6 279 aa14.18□□□□□ -0.14
TPM3-206ENST00000330188 PABPN1LA6NDY0 278 aaKnown RBP14.18□□□□□ -0.14
TPM3-206ENST00000330188 NPIPB8E9PQR5 432 aa14.18□□□□□ -0.14
TPM3-206ENST00000330188 ERN1O75460 977 aaKnown RBP14.18□□□□□ -0.14
TPM3-206ENST00000330188 TCF3P15923 654 aa14.18□□□□□ -0.14
TPM3-206ENST00000330188 HOXB9P17482 250 aaPredicted RBP14.18□□□□□ -0.14
TPM3-206ENST00000330188 SDC1P18827 310 aa14.18□□□□□ -0.14
TPM3-206ENST00000330188 TACR1P25103 407 aa14.18□□□□□ -0.14
TPM3-206ENST00000330188 S100A3P33764 101 aa14.18□□□□□ -0.14
TPM3-206ENST00000330188 MTHFRP42898 656 aa14.18□□□□□ -0.14
TPM3-206ENST00000330188 RECQLP46063 649 aaPredicted RBP14.18□□□□□ -0.14
TPM3-206ENST00000330188 CDK9P50750 372 aaKnown RBP14.18□□□□□ -0.14
TPM3-206ENST00000330188 ALDH3A2P51648 485 aa14.18□□□□□ -0.14
TPM3-206ENST00000330188 DCDC1P59894 354 aa14.18□□□□□ -0.14
TPM3-206ENST00000330188 DAG1Q14118 895 aa14.18□□□□□ -0.14
TPM3-206ENST00000330188 ATG9BQ674R7 924 aa14.18□□□□□ -0.14
TPM3-206ENST00000330188 NEK10Q6ZWH5 1172 aa14.18□□□□□ -0.14
TPM3-206ENST00000330188 CALHM3Q86XJ0 350 aa14.18□□□□□ -0.14
TPM3-206ENST00000330188 RASGRP3Q8IV61 690 aa14.18□□□□□ -0.14
TPM3-206ENST00000330188 BEND7Q8N7W2 519 aaPredicted RBP14.18□□□□□ -0.14
TPM3-206ENST00000330188 FRS2Q8WU20 508 aa14.18□□□□□ -0.14
TPM3-206ENST00000330188 ELMO1Q92556 727 aa14.18□□□□□ -0.14
TPM3-206ENST00000330188 APIPQ96GX9 242 aa14.18□□□□□ -0.14
TPM3-206ENST00000330188 TSSK3Q96PN8 268 aa14.18□□□□□ -0.14
TPM3-206ENST00000330188 HEPHQ9BQS7 1158 aa14.18□□□□□ -0.14
TPM3-206ENST00000330188 TDP1Q9NUW8 608 aa14.18□□□□□ -0.14
TPM3-206ENST00000330188 DNAJC11Q9NVH1 559 aa14.18□□□□□ -0.14
TPM3-206ENST00000330188 PPT2Q9UMR5 302 aa14.18□□□□□ -0.14
TPM3-206ENST00000330188 ERVW-1Q9UQF0 538 aa14.18□□□□□ -0.14
TPM3-206ENST00000330188 INVSQ9Y283 1065 aa14.18□□□□□ -0.14
TPM3-206ENST00000330188 SERTM1A2A2V5 107 aa14.17□□□□□ -0.14
TPM3-206ENST00000330188 HIDE1A8MVS5 230 aa14.17□□□□□ -0.14
TPM3-206ENST00000330188 FAM220BPB1ANY3 271 aa14.17□□□□□ -0.14
TPM3-206ENST00000330188 H0YAE9 185 aa14.17□□□□□ -0.14
TPM3-206ENST00000330188 KPNA5O15131 536 aa14.17□□□□□ -0.14
TPM3-206ENST00000330188 LEFTY1O75610 366 aa14.17□□□□□ -0.14
TPM3-206ENST00000330188 RFPL2O75678 378 aa14.17□□□□□ -0.14
TPM3-206ENST00000330188 SCELO95171 688 aa14.17□□□□□ -0.14
TPM3-206ENST00000330188 ITPKAP23677 461 aa14.17□□□□□ -0.14
TPM3-206ENST00000330188 DDX6P26196 483 aaKnown RBP eCLIP14.17□□□□□ -0.14
TPM3-206ENST00000330188 NRIP1P48552 1158 aa14.17□□□□□ -0.14
TPM3-206ENST00000330188 GZMMP51124 257 aa14.17□□□□□ -0.14
TPM3-206ENST00000330188 AP1S2P56377 157 aa14.17□□□□□ -0.14
TPM3-206ENST00000330188 ERVFC1P60507 584 aa14.17□□□□□ -0.14
TPM3-206ENST00000330188 PFN3P60673 137 aa14.17□□□□□ -0.14
TPM3-206ENST00000330188 RBBP5Q15291 538 aaKnown RBP14.17□□□□□ -0.14
TPM3-206ENST00000330188 LY6G5CQ5SRR4 150 aa14.17□□□□□ -0.14
TPM3-206ENST00000330188 GCNT7Q6ZNI0 430 aa14.17□□□□□ -0.14
TPM3-206ENST00000330188 Q6ZVL8 140 aa14.17□□□□□ -0.14
TPM3-206ENST00000330188 LPCAT2Q7L5N7 544 aa14.17□□□□□ -0.14
TPM3-206ENST00000330188 GPR149Q86SP6 731 aa14.17□□□□□ -0.14
TPM3-206ENST00000330188 C10orf111Q8N326 155 aa14.17□□□□□ -0.14
TPM3-206ENST00000330188 MCOLN3Q8TDD5 553 aa14.17□□□□□ -0.14
TPM3-206ENST00000330188 FAM162AQ96A26 154 aa14.17□□□□□ -0.14
TPM3-206ENST00000330188 SLC47A1Q96FL8 570 aa14.17□□□□□ -0.14
TPM3-206ENST00000330188 MRGPRX3Q96LB0 322 aa14.17□□□□□ -0.14
TPM3-206ENST00000330188 TCF25Q9BQ70 676 aa14.17□□□□□ -0.14
TPM3-206ENST00000330188 INPP5KQ9BT40 448 aa14.17□□□□□ -0.14
TPM3-206ENST00000330188 OSBPL6Q9BZF3 934 aa14.17□□□□□ -0.14
TPM3-206ENST00000330188 PCDH12Q9NPG4 1184 aa14.17□□□□□ -0.14
TPM3-206ENST00000330188 HPS4Q9NQG7 708 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms