RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 HPDLQ96IR7 371 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 ZSWIM3Q96MP5 696 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 CDCA4Q9BXL8 241 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 RANBP3Q9H6Z4 567 aaPredicted RBP8.2□□□□□ -1.1
SKA2-201ENST00000330137 ERVMER34-1Q9H9K5 563 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 DBNDD1Q9H9R9 158 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 CARS2Q9HA77 564 aaKnown RBP8.2□□□□□ -1.1
SKA2-201ENST00000330137 SCPEP1Q9HB40 452 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 LTB4R2Q9NPC1 389 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 ITM2CQ9NQX7 267 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 C14orf119Q9NWQ9 140 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 U3KQ87 197 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 INO80B-WBP1J3KQ70 363 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 KCNK1O00180 336 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 AOC2O75106 756 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 HMGN1P05114 100 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 CD1DP15813 335 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 ATF6P18850 670 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 ICAM3P32942 547 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 HTR7P34969 479 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 TGFBR1P36897 503 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 DAPP51397 102 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 PSPHP78330 225 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 CD83Q01151 205 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 COL19A1Q14993 1142 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 NKG7Q16617 165 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 SYT16Q17RD7 645 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 FAHD1Q6P587 224 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 ZNF549Q6P9A3 640 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 PLEKHM3Q6ZWE6 761 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 AHSA2Q719I0 299 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 TRMT1LQ7Z2T5 733 aaKnown RBP8.2□□□□□ -1.1
SKA2-201ENST00000330137 TMEM179BQ7Z7N9 219 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 ZSWIM9Q86XI8 627 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 DNAJC22Q8N4W6 341 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 DENND6BQ8NEG7 585 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 OR4M2Q8NGB6 313 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 RPL10LQ96L21 214 aaKnown RBP8.2□□□□□ -1.1
SKA2-201ENST00000330137 SAMD11Q96NU1 681 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 OPALINQ96PE5 141 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 LPIN3Q9BQK8 851 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 MCOLN1Q9GZU1 580 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 SLC6A15Q9H2J7 730 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 FZD8Q9H461 694 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 RIBC2Q9H4K1 309 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 TAS2R7Q9NYW3 318 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 CNOT2Q9NZN8 540 aaKnown RBP8.2□□□□□ -1.1
SKA2-201ENST00000330137 PCDHGB3Q9Y5G1 929 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 V9GYQ6 96 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 A8MV72 311 aaPredicted RBP8.19□□□□□ -1.1
SKA2-201ENST00000330137 A8MVJ9 347 aa8.19□□□□□ -1.1
SKA2-201ENST00000330137 E5RI56 91 aa8.19□□□□□ -1.1
SKA2-201ENST00000330137 KIAA0513O60268 411 aa8.19□□□□□ -1.1
SKA2-201ENST00000330137 FZD6O60353 706 aa8.19□□□□□ -1.1
SKA2-201ENST00000330137 CREG1O75629 220 aa8.19□□□□□ -1.1
SKA2-201ENST00000330137 RAD17O75943 681 aa8.19□□□□□ -1.1
SKA2-201ENST00000330137 IFNA7P01567 189 aa8.19□□□□□ -1.1
SKA2-201ENST00000330137 HOXD4P09016 255 aaPredicted RBP8.19□□□□□ -1.1
SKA2-201ENST00000330137 CCNYL3P0C7X3 344 aa8.19□□□□□ -1.1
SKA2-201ENST00000330137 SLURP2P0DP57 97 aa8.19□□□□□ -1.1
SKA2-201ENST00000330137 PFKLP17858 780 aa8.19□□□□□ -1.1
SKA2-201ENST00000330137 ADRA1AP35348 466 aa8.19□□□□□ -1.1
SKA2-201ENST00000330137 RRAS2P62070 204 aaPredicted RBP8.19□□□□□ -1.1
SKA2-201ENST00000330137 CYP4F3Q08477 520 aa8.19□□□□□ -1.1
SKA2-201ENST00000330137 SNTA1Q13424 505 aa8.19□□□□□ -1.1
SKA2-201ENST00000330137 SMAD1Q15797 465 aaKnown RBP8.19□□□□□ -1.1
SKA2-201ENST00000330137 ZNF79Q15937 498 aa8.19□□□□□ -1.1
SKA2-201ENST00000330137 HKDC1Q2TB90 917 aa8.19□□□□□ -1.1
SKA2-201ENST00000330137 INO80DQ53TQ3 878 aaPredicted RBP8.19□□□□□ -1.1
SKA2-201ENST00000330137 PPP1R26Q5T8A7 1209 aaPredicted RBP8.19□□□□□ -1.1
SKA2-201ENST00000330137 ATF7IP2Q5U623 682 aa8.19□□□□□ -1.1
SKA2-201ENST00000330137 ANKS6Q68DC2 871 aa8.19□□□□□ -1.1
SKA2-201ENST00000330137 OR2T5Q6IEZ7 315 aa8.19□□□□□ -1.1
SKA2-201ENST00000330137 ESRP1Q6NXG1 681 aaKnown RBP8.19□□□□□ -1.1
SKA2-201ENST00000330137 METAP1DQ6UB28 335 aaPredicted RBP8.19□□□□□ -1.1
SKA2-201ENST00000330137 PLET1Q6UQ28 207 aa8.19□□□□□ -1.1
SKA2-201ENST00000330137 HSDL2Q6YN16 418 aa8.19□□□□□ -1.1
SKA2-201ENST00000330137 ASPGQ86U10 573 aa8.19□□□□□ -1.1
SKA2-201ENST00000330137 CDH24Q86UP0 819 aa8.19□□□□□ -1.1
SKA2-201ENST00000330137 CALHM3Q86XJ0 350 aa8.19□□□□□ -1.1
SKA2-201ENST00000330137 RASAL3Q86YV0 1011 aa8.19□□□□□ -1.1
SKA2-201ENST00000330137 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.19□□□□□ -1.1
SKA2-201ENST00000330137 FAM126BQ8IXS8 530 aa8.19□□□□□ -1.1
SKA2-201ENST00000330137 PLPP6Q8IY26 295 aa8.19□□□□□ -1.1
SKA2-201ENST00000330137 CYP4Z2PQ8N1L4 340 aa8.19□□□□□ -1.1
SKA2-201ENST00000330137 SPATA6LQ8N4H0 392 aa8.19□□□□□ -1.1
SKA2-201ENST00000330137 PTGR2Q8N8N7 351 aaPredicted RBP8.19□□□□□ -1.1
SKA2-201ENST00000330137 TP53I13Q8NBR0 393 aaPredicted RBP8.19□□□□□ -1.1
SKA2-201ENST00000330137 C3orf58Q8NDZ4 430 aa8.19□□□□□ -1.1
SKA2-201ENST00000330137 TTLQ8NG68 377 aa8.19□□□□□ -1.1
SKA2-201ENST00000330137 OR7D4Q8NG98 312 aa8.19□□□□□ -1.1
SKA2-201ENST00000330137 OR2T29Q8NH02 315 aa8.19□□□□□ -1.1
SKA2-201ENST00000330137 FBXO30Q8TB52 745 aa8.19□□□□□ -1.1
SKA2-201ENST00000330137 APH1BQ8WW43 257 aa8.19□□□□□ -1.1
SKA2-201ENST00000330137 C18orf25Q96B23 403 aaPredicted RBP8.19□□□□□ -1.1
SKA2-201ENST00000330137 CCDC120Q96HB5 630 aa8.19□□□□□ -1.1
SKA2-201ENST00000330137 FAM167AQ96KS9 214 aa8.19□□□□□ -1.1
SKA2-201ENST00000330137 TEX37Q96LM6 180 aa8.19□□□□□ -1.1
SKA2-201ENST00000330137 NFKBIZQ9BYH8 718 aa8.19□□□□□ -1.1
SKA2-201ENST00000330137 ARNT2Q9HBZ2 717 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms