RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 OR10G2Q8NGC3 310 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 OR8S1Q8NH09 359 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 CLP1Q92989 425 aaKnown RBP7.76□□□□□ -1.17
CIITA-201ENST00000324288 SPATA9Q9BWV2 254 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 UPB1Q9UBR1 384 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 POMPQ9Y244 141 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 KIAA2026Q5HYC2 2103 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 TLR5O60602 858 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 CYP3A5P20815 502 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 PPIBP23284 216 aaKnown RBP7.76□□□□□ -1.17
CIITA-201ENST00000324288 HTR2BP41595 481 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 PPP3R1P63098 170 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 TLE2Q04725 743 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 COL9A2Q14055 689 aaPredicted RBP7.76□□□□□ -1.17
CIITA-201ENST00000324288 ATXN7L2Q5T6C5 722 aaPredicted RBP7.76□□□□□ -1.17
CIITA-201ENST00000324288 KLHL35Q6PF15 583 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 PCDHB18PQ96TA0 734 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 GLOD4Q9HC38 313 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 SPATA31A5Q5VU36 1347 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 SPATA31A7Q8IWB4 1347 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 WNT10BO00744 389 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 PRKCGP05129 697 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 ZNF16P17020 682 aaPredicted RBP7.76□□□□□ -1.17
CIITA-201ENST00000324288 STT3AP46977 705 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 HYAL2Q12891 473 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 LRRC37A5PQ49AS3 106 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 CYP27C1Q4G0S4 372 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 HOPXQ9BPY8 73 aaPredicted RBP7.76□□□□□ -1.17
CIITA-201ENST00000324288 TMEM185BQ9H7F4 350 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 PDCD5O14737 125 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 TBX10O75333 385 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 ADH1AP07327 375 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 MAGEA8P43361 318 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 RNF144AP50876 292 aaPredicted RBP7.76□□□□□ -1.17
CIITA-201ENST00000324288 OR12D2P58182 307 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 DSC2Q02487 901 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 SSX2Q16385 188 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 CMTR2Q8IYT2 770 aaKnown RBP7.76□□□□□ -1.17
CIITA-201ENST00000324288 ELMOD2Q8IZ81 293 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 UNC93B1Q9H1C4 597 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 TTC24A2A3L6 582 aaPredicted RBP7.76□□□□□ -1.17
CIITA-201ENST00000324288 FGBP02675 491 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 IFNW1P05000 195 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 CDH5P33151 784 aaPredicted RBP7.76□□□□□ -1.17
CIITA-201ENST00000324288 TAF10Q12962 218 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 TUBB3Q13509 450 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 NMUR1Q9HB89 426 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 FARSBQ9NSD9 589 aaKnown RBP7.76□□□□□ -1.17
CIITA-201ENST00000324288 NUDT15Q9NV35 164 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 KLRC4O43908 158 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 APOC3P02656 99 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 LAMP2P13473 410 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 STOMP27105 288 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 GANABQ14697 944 aaKnown RBP7.76□□□□□ -1.17
CIITA-201ENST00000324288 FAM46CQ5VWP2 391 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 NAPRTQ6XQN6 538 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 SLC51AQ86UW1 340 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 PEX5LQ8IYB4 626 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 TOMM5Q8N4H5 51 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 CDT1Q9H211 546 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 FARS2O95363 451 aaKnown RBP7.76□□□□□ -1.17
CIITA-201ENST00000324288 BPNT1O95861 308 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 ECHS1P30084 290 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 GTF2H2Q13888 395 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 PABPC1LQ4VXU2 614 aaKnown RBP7.76□□□□□ -1.17
CIITA-201ENST00000324288 SLC25A25Q6KCM7 469 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 GTF2H2CQ6P1K8 395 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 MAP4K3Q8IVH8 894 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 SGCDQ92629 289 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 TRMT61BQ9BVS5 477 aaKnown RBP7.76□□□□□ -1.17
CIITA-201ENST00000324288 TAS2R7Q9NYW3 318 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 H7C2Y5 167 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 RPLP2P05387 115 aaKnown RBP7.76□□□□□ -1.17
CIITA-201ENST00000324288 IRF9Q00978 393 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 TBC1D25Q3MII6 688 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 UNC5BQ8IZJ1 945 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 PIAS4Q8N2W9 510 aaPredicted RBP7.76□□□□□ -1.17
CIITA-201ENST00000324288 SLC25A36Q96CQ1 311 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 CYP2S1Q96SQ9 504 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 CACNG4Q9UBN1 327 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 MRPS33Q9Y291 106 aaKnown RBP7.76□□□□□ -1.17
CIITA-201ENST00000324288 MFSD11O43934 449 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 RBM20Q5T481 1227 aaKnown RBP7.76□□□□□ -1.17
CIITA-201ENST00000324288 GALNT13Q8IUC8 556 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 RASGEF1AQ8N9B8 481 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 LGR4Q9BXB1 951 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 IDI2Q9BXS1 227 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 SMURF2Q9HAU4 748 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 RC3H2Q9HBD1 1191 aaKnown RBP7.76□□□□□ -1.17
CIITA-201ENST00000324288 DNAJC27Q9NZQ0 273 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 MRTO4Q9UKD2 239 aaKnown RBP7.76□□□□□ -1.17
CIITA-201ENST00000324288 MANSC4A6NHS7 340 aaPredicted RBP7.75□□□□□ -1.17
CIITA-201ENST00000324288 ARPC2O15144 300 aa7.75□□□□□ -1.17
CIITA-201ENST00000324288 ALOX15BO15296 676 aa7.75□□□□□ -1.17
CIITA-201ENST00000324288 FGF1P05230 155 aa7.75□□□□□ -1.17
CIITA-201ENST00000324288 CD2P06729 351 aa7.75□□□□□ -1.17
CIITA-201ENST00000324288 RPL17P18621 184 aaKnown RBP7.75□□□□□ -1.17
CIITA-201ENST00000324288 PTGIRP43119 386 aa7.75□□□□□ -1.17
CIITA-201ENST00000324288 ARCN1P48444 511 aaKnown RBP7.75□□□□□ -1.17
CIITA-201ENST00000324288 DSG2Q14126 1118 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms