RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 TRIM39Q9HCM9 518 aa13.35□□□□□ -0.27
DDX54-202ENST00000314045 SAMHD1Q9Y3Z3 626 aaKnown RBP13.35□□□□□ -0.27
DDX54-202ENST00000314045 TNS1Q9HBL0 1735 aaKnown RBP13.35□□□□□ -0.27
DDX54-202ENST00000314045 WFS1O76024 890 aa13.35□□□□□ -0.27
DDX54-202ENST00000314045 PRPS1L1P21108 318 aa13.35□□□□□ -0.27
DDX54-202ENST00000314045 SGSHP51688 502 aa13.35□□□□□ -0.27
DDX54-202ENST00000314045 HERC3Q15034 1050 aa13.35□□□□□ -0.27
DDX54-202ENST00000314045 ADRM1Q16186 407 aa13.35□□□□□ -0.27
DDX54-202ENST00000314045 DPY19L1Q2PZI1 675 aa13.35□□□□□ -0.27
DDX54-202ENST00000314045 FAM78AQ5JUQ0 283 aa13.35□□□□□ -0.27
DDX54-202ENST00000314045 KCTD11Q693B1 232 aa13.35□□□□□ -0.27
DDX54-202ENST00000314045 EQTNQ9NQ60 294 aa13.35□□□□□ -0.27
DDX54-202ENST00000314045 ENOPH1Q9UHY7 261 aa13.35□□□□□ -0.27
DDX54-202ENST00000314045 M0R3G1 203 aa13.35□□□□□ -0.27
DDX54-202ENST00000314045 NUDT14O95848 222 aa13.35□□□□□ -0.27
DDX54-202ENST00000314045 TNFP01375 233 aa13.35□□□□□ -0.27
DDX54-202ENST00000314045 AOC1P19801 751 aa13.35□□□□□ -0.27
DDX54-202ENST00000314045 DGKQP52824 942 aa13.35□□□□□ -0.27
DDX54-202ENST00000314045 CBARPQ8N350 705 aaPredicted RBP13.35□□□□□ -0.27
DDX54-202ENST00000314045 POP5Q969H6 163 aaKnown RBP13.35□□□□□ -0.27
DDX54-202ENST00000314045 ARMC5Q96C12 935 aa13.35□□□□□ -0.27
DDX54-202ENST00000314045 ZNF607Q96SK3 696 aa13.35□□□□□ -0.27
DDX54-202ENST00000314045 ZNF382Q96SR6 550 aa13.35□□□□□ -0.27
DDX54-202ENST00000314045 DHRS4Q9BTZ2 278 aa13.35□□□□□ -0.27
DDX54-202ENST00000314045 DUSP26Q9BV47 211 aa13.35□□□□□ -0.27
DDX54-202ENST00000314045 PRRG3Q9BZD7 231 aa13.35□□□□□ -0.27
DDX54-202ENST00000314045 DUSP12Q9UNI6 340 aa13.35□□□□□ -0.27
DDX54-202ENST00000314045 C5AR1P21730 350 aa13.34□□□□□ -0.27
DDX54-202ENST00000314045 TTC23Q5W5X9 447 aa13.34□□□□□ -0.27
DDX54-202ENST00000314045 ERICH5Q6P6B1 374 aa13.34□□□□□ -0.27
DDX54-202ENST00000314045 TMIGD1Q6UXZ0 262 aa13.34□□□□□ -0.27
DDX54-202ENST00000314045 SETD9Q8NE22 299 aa13.34□□□□□ -0.27
DDX54-202ENST00000314045 OR13J1Q8NGT2 312 aa13.34□□□□□ -0.27
DDX54-202ENST00000314045 ADAMTS15Q8TE58 950 aa13.34□□□□□ -0.27
DDX54-202ENST00000314045 APOL4Q9BPW4 351 aa13.34□□□□□ -0.27
DDX54-202ENST00000314045 SLC7A8Q9UHI5 535 aa13.34□□□□□ -0.27
DDX54-202ENST00000314045 ACSL5Q9ULC5 683 aa13.34□□□□□ -0.27
DDX54-202ENST00000314045 SLC9A8Q9Y2E8 581 aa13.34□□□□□ -0.27
DDX54-202ENST00000314045 CCDC189A1A4V9 331 aa13.34□□□□□ -0.27
DDX54-202ENST00000314045 HNRNPCL2B2RXH8 293 aa13.34□□□□□ -0.27
DDX54-202ENST00000314045 RNGTTO60942 597 aaKnown RBP13.34□□□□□ -0.27
DDX54-202ENST00000314045 LILRB3O75022 631 aa13.34□□□□□ -0.27
DDX54-202ENST00000314045 PDE9AO76083 593 aa13.34□□□□□ -0.27
DDX54-202ENST00000314045 ITGA2P17301 1181 aa13.34□□□□□ -0.27
DDX54-202ENST00000314045 RPS7P62081 194 aaKnown RBP13.34□□□□□ -0.27
DDX54-202ENST00000314045 STX4Q12846 297 aa13.34□□□□□ -0.27
DDX54-202ENST00000314045 PON2Q15165 354 aa13.34□□□□□ -0.27
DDX54-202ENST00000314045 OR4D1Q15615 310 aa13.34□□□□□ -0.27
DDX54-202ENST00000314045 PLD3Q8IV08 490 aa13.34□□□□□ -0.27
DDX54-202ENST00000314045 PGBD5Q8N414 524 aa13.34□□□□□ -0.27
DDX54-202ENST00000314045 C11orf65Q8NCR3 313 aa13.34□□□□□ -0.27
DDX54-202ENST00000314045 GPR26Q8NDV2 337 aa13.34□□□□□ -0.27
DDX54-202ENST00000314045 NDEL1Q9GZM8 345 aa13.34□□□□□ -0.27
DDX54-202ENST00000314045 LHX3Q9UBR4 397 aa13.34□□□□□ -0.27
DDX54-202ENST00000314045 MAP4K5Q9Y4K4 846 aa13.34□□□□□ -0.27
DDX54-202ENST00000314045 VEGFDO43915 354 aa13.34□□□□□ -0.27
DDX54-202ENST00000314045 MT-ND1P03886 318 aa13.34□□□□□ -0.27
DDX54-202ENST00000314045 MTPNP58546 118 aa13.34□□□□□ -0.27
DDX54-202ENST00000314045 NDUFA9Q16795 377 aa13.34□□□□□ -0.27
DDX54-202ENST00000314045 C6orf89Q6UWU4 347 aa13.34□□□□□ -0.27
DDX54-202ENST00000314045 TEX26Q8N6G2 289 aa13.34□□□□□ -0.27
DDX54-202ENST00000314045 OR4E2Q8NGC2 313 aa13.34□□□□□ -0.27
DDX54-202ENST00000314045 GSDMCQ9BYG8 508 aa13.34□□□□□ -0.27
DDX54-202ENST00000314045 C8orf33Q9H7E9 229 aaPredicted RBP13.34□□□□□ -0.27
DDX54-202ENST00000314045 SLC24A3Q9HC58 644 aa13.34□□□□□ -0.27
DDX54-202ENST00000314045 NDUFA13Q9P0J0 144 aa13.34□□□□□ -0.27
DDX54-202ENST00000314045 C3orf18Q9UK00 162 aa13.34□□□□□ -0.27
DDX54-202ENST00000314045 TCRBV21S2A2A0A5A6 115 aa13.34□□□□□ -0.27
DDX54-202ENST00000314045 MAGEB17A8MXT2 336 aa13.34□□□□□ -0.27
DDX54-202ENST00000314045 B4DGG1 531 aa13.34□□□□□ -0.27
DDX54-202ENST00000314045 PTGES3LE9PB15 166 aa13.34□□□□□ -0.27
DDX54-202ENST00000314045 TRIM24O15164 1050 aa13.34□□□□□ -0.27
DDX54-202ENST00000314045 TNFAIP8O95379 198 aa13.34□□□□□ -0.27
DDX54-202ENST00000314045 ATXN1LP0C7T5 689 aaKnown RBP13.34□□□□□ -0.27
DDX54-202ENST00000314045 ALAS2P22557 587 aa13.34□□□□□ -0.27
DDX54-202ENST00000314045 ADRA1AP35348 466 aa13.34□□□□□ -0.27
DDX54-202ENST00000314045 SLC6A11P48066 632 aa13.34□□□□□ -0.27
DDX54-202ENST00000314045 IDH2P48735 452 aaKnown RBP13.34□□□□□ -0.27
DDX54-202ENST00000314045 RFTN2Q52LD8 501 aaPredicted RBP13.34□□□□□ -0.27
DDX54-202ENST00000314045 GPR141Q7Z602 305 aa13.34□□□□□ -0.27
DDX54-202ENST00000314045 NRSN1Q8IZ57 195 aa13.34□□□□□ -0.27
DDX54-202ENST00000314045 GPR150Q8NGU9 434 aa13.34□□□□□ -0.27
DDX54-202ENST00000314045 PHF10Q8WUB8 498 aaKnown RBP13.34□□□□□ -0.27
DDX54-202ENST00000314045 GLMNQ92990 594 aa13.34□□□□□ -0.27
DDX54-202ENST00000314045 CPEB1Q9BZB8 566 aaKnown RBP13.34□□□□□ -0.27
DDX54-202ENST00000314045 CD207Q9UJ71 328 aa13.34□□□□□ -0.27
DDX54-202ENST00000314045 SAMD4AQ9UPU9 718 aaKnown RBP13.34□□□□□ -0.27
DDX54-202ENST00000314045 WASH3PC4AMC7 463 aa13.33□□□□□ -0.28
DDX54-202ENST00000314045 ETV4P43268 484 aa13.33□□□□□ -0.28
DDX54-202ENST00000314045 CENPAP49450 140 aa13.33□□□□□ -0.28
DDX54-202ENST00000314045 EPS8Q12929 822 aa13.33□□□□□ -0.28
DDX54-202ENST00000314045 PPP4R4Q6NUP7 873 aa13.33□□□□□ -0.28
DDX54-202ENST00000314045 CASP12Q6UXS9 341 aa13.33□□□□□ -0.28
DDX54-202ENST00000314045 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.33□□□□□ -0.28
DDX54-202ENST00000314045 KLHDC7BQ96G42 594 aa13.33□□□□□ -0.28
DDX54-202ENST00000314045 NR1H4Q96RI1 486 aaPredicted RBP13.33□□□□□ -0.28
DDX54-202ENST00000314045 BRINP2Q9C0B6 783 aa13.33□□□□□ -0.28
DDX54-202ENST00000314045 RC3H2Q9HBD1 1191 aaKnown RBP13.33□□□□□ -0.28
DDX54-202ENST00000314045 EXD2Q9NVH0 621 aa13.33□□□□□ -0.28
DDX54-202ENST00000314045 ZIM2Q9NZV7 527 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms