RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 MBOAT1Q6ZNC8 495 aa8.65□□□□□ -1.03
COL6A5-202ENST00000312481 TTC29Q8NA56 475 aaPredicted RBP8.65□□□□□ -1.03
COL6A5-202ENST00000312481 PCDH19Q8TAB3 1148 aa8.65□□□□□ -1.03
COL6A5-202ENST00000312481 ELMO1Q92556 727 aa8.65□□□□□ -1.03
COL6A5-202ENST00000312481 SEMA4BQ9NPR2 832 aaPredicted RBP8.65□□□□□ -1.03
COL6A5-202ENST00000312481 PDP1Q9P0J1 537 aaPredicted RBP8.65□□□□□ -1.03
COL6A5-202ENST00000312481 HCN3Q9P1Z3 774 aa8.65□□□□□ -1.03
COL6A5-202ENST00000312481 FAM198AQ9UFP1 575 aa8.65□□□□□ -1.03
COL6A5-202ENST00000312481 TMEM14AQ9Y6G1 99 aa8.65□□□□□ -1.03
COL6A5-202ENST00000312481 COQ9O75208 318 aa8.65□□□□□ -1.03
COL6A5-202ENST00000312481 UGT2B10P36537 528 aa8.65□□□□□ -1.03
COL6A5-202ENST00000312481 INHBCP55103 352 aa8.65□□□□□ -1.03
COL6A5-202ENST00000312481 MED22Q15528 200 aa8.65□□□□□ -1.03
COL6A5-202ENST00000312481 TRIM74Q86UV6 250 aa8.65□□□□□ -1.03
COL6A5-202ENST00000312481 TRIM73Q86UV7 250 aa8.65□□□□□ -1.03
COL6A5-202ENST00000312481 MIB1Q86YT6 1006 aa8.65□□□□□ -1.03
COL6A5-202ENST00000312481 PYURFQ96I23 114 aa8.65□□□□□ -1.03
COL6A5-202ENST00000312481 CDC6Q99741 560 aa8.65□□□□□ -1.03
COL6A5-202ENST00000312481 C12orf65Q9H3J6 166 aaKnown RBP8.65□□□□□ -1.03
COL6A5-202ENST00000312481 ZNF490Q9ULM2 529 aaPredicted RBP8.65□□□□□ -1.03
COL6A5-202ENST00000312481 ANKRD63C9JTQ0 380 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 CCRL2O00421 344 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 WNT9AO14904 365 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 CPSF4O95639 269 aaKnown RBP8.64□□□□□ -1.03
COL6A5-202ENST00000312481 MMP3P08254 477 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 TM4SF1P30408 202 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 ZNF280AP59817 542 aaPredicted RBP8.64□□□□□ -1.03
COL6A5-202ENST00000312481 ZSCAN18Q8TBC5 510 aaPredicted RBP8.64□□□□□ -1.03
COL6A5-202ENST00000312481 CMTM7Q96FZ5 175 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 PHPT1Q9NRX4 125 aaPredicted RBP8.64□□□□□ -1.03
COL6A5-202ENST00000312481 SFMBT1Q9UHJ3 866 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 PRAMEF1O95521 474 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 TRAPPC2P0DI81 140 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 TRAPPC2BP0DI82 140 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 BMP1P13497 986 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 CD247P20963 164 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 MPIP34949 423 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 MTAPQ13126 283 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 TAF5Q15542 800 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 DLG2Q15700 870 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 CTC1Q2NKJ3 1217 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 DCAF12L1Q5VU92 463 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 GRHL2Q6ISB3 625 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 PGAP1Q75T13 922 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 PSD4Q8NDX1 1056 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 NXNL1Q96CM4 212 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 OSMRQ99650 979 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 GPR20Q99678 358 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 PDZD7Q9H5P4 517 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 FAM105AQ9NUU6 356 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 IFT52Q9Y366 437 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 SDK1Q7Z5N4 2213 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 LOC100130705A0A1B0GUX0 176 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 ZNF730Q6ZMV8 503 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 FSTL5Q8N475 847 aaPredicted RBP8.64□□□□□ -1.03
COL6A5-202ENST00000312481 PCDHB18PQ96TA0 734 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 EPYCQ99645 322 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 DCSTAMPQ9H295 470 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 TRNAU1APQ9NX07 287 aaKnown RBP8.64□□□□□ -1.03
COL6A5-202ENST00000312481 FKBPLQ9UIM3 349 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 FAM50BQ9Y247 325 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 ACOX3O15254 700 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 SNX4O95219 450 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 DAOAP59103 153 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 FNBP1LQ5T0N5 605 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 ZCCHC23Q6ZST2 131 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 VMP1Q96GC9 406 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 TMEM175Q9BSA9 504 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 EBF3Q9H4W6 596 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 NANSQ9NR45 359 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 HCN4Q9Y3Q4 1203 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 FFAR2O15552 330 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 RPIAP49247 311 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 CTBP2P56545 445 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 RPS14P62263 151 aaKnown RBP8.64□□□□□ -1.03
COL6A5-202ENST00000312481 ZNF440Q8IYI8 595 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 SNRNP27Q8WVK2 155 aaKnown RBP8.64□□□□□ -1.03
COL6A5-202ENST00000312481 LGMNQ99538 433 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 E7ENX8 843 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 RB1P06400 928 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 CYP2B6P20813 491 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 DGKGP49619 791 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 DGCR6Q14129 220 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 ZBTB6Q15916 424 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 DUOXA1Q1HG43 343 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 SLC35F1Q5T1Q4 408 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 SLC25A25Q6KCM7 469 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 IZUMO1Q8IYV9 350 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 PHYHIPQ92561 330 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 ART5Q96L15 291 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 SIX4Q9UIU6 781 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 TLX3O43711 291 aaPredicted RBP8.64□□□□□ -1.03
COL6A5-202ENST00000312481 WBP4O75554 376 aaKnown RBP8.64□□□□□ -1.03
COL6A5-202ENST00000312481 ELFN1P0C7U0 828 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 CLCA4Q14CN2 919 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 CNTN4Q8IWV2 1026 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 SLC15A3Q8IY34 581 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 FBXO30Q8TB52 745 aa8.64□□□□□ -1.03
COL6A5-202ENST00000312481 DDX4Q9NQI0 724 aaKnown RBP8.64□□□□□ -1.03
COL6A5-202ENST00000312481 MRPL17Q9NRX2 175 aaKnown RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms