RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 DCAF4L2Q8NA75 395 aa24.72■■□□□ 1.55
HOXB3-201ENST00000311626 CCDC138Q96M89 665 aa24.72■■□□□ 1.55
HOXB3-201ENST00000311626 VPS4AQ9UN37 437 aa24.72■■□□□ 1.55
HOXB3-201ENST00000311626 ANAPC1Q9H1A4 1944 aa24.72■■□□□ 1.55
HOXB3-201ENST00000311626 PQBP1O60828 265 aaKnown RBP24.71■■□□□ 1.55
HOXB3-201ENST00000311626 LMAN2Q12907 356 aa24.71■■□□□ 1.55
HOXB3-201ENST00000311626 MAD2L1Q13257 205 aaPredicted RBP24.71■■□□□ 1.55
HOXB3-201ENST00000311626 MYLIPQ8WY64 445 aa24.71■■□□□ 1.55
HOXB3-201ENST00000311626 USP7Q93009 1102 aa24.71■■□□□ 1.55
HOXB3-201ENST00000311626 IGSF21Q96ID5 467 aa24.71■■□□□ 1.55
HOXB3-201ENST00000311626 TRPS1Q9UHF7 1281 aa24.71■■□□□ 1.55
HOXB3-201ENST00000311626 TRBV5-4A0A0C4DH59 114 aa24.71■■□□□ 1.55
HOXB3-201ENST00000311626 LOC100130705A0A1B0GUX0 176 aa24.71■■□□□ 1.55
HOXB3-201ENST00000311626 TTC23Q5W5X9 447 aa24.71■■□□□ 1.55
HOXB3-201ENST00000311626 LRRC66Q68CR7 880 aa24.71■■□□□ 1.55
HOXB3-201ENST00000311626 MACC1Q6ZN28 852 aa24.71■■□□□ 1.55
HOXB3-201ENST00000311626 CDC26Q8NHZ8 85 aa24.71■■□□□ 1.55
HOXB3-201ENST00000311626 APOLD1Q96LR9 279 aa24.71■■□□□ 1.55
HOXB3-201ENST00000311626 CPPED1Q9BRF8 314 aaPredicted RBP24.71■■□□□ 1.55
HOXB3-201ENST00000311626 MRPL9Q9BYD2 267 aaKnown RBP24.71■■□□□ 1.55
HOXB3-201ENST00000311626 SMG9Q9H0W8 520 aaKnown RBP24.71■■□□□ 1.55
HOXB3-201ENST00000311626 SRRDQ9UH36 339 aa24.71■■□□□ 1.55
HOXB3-201ENST00000311626 NRG2O14511 850 aaPredicted RBP24.7■■□□□ 1.55
HOXB3-201ENST00000311626 INMTO95050 263 aa24.7■■□□□ 1.55
HOXB3-201ENST00000311626 GTF2H3Q13889 308 aa24.7■■□□□ 1.55
HOXB3-201ENST00000311626 OR4F3Q6IEY1 312 aa24.7■■□□□ 1.55
HOXB3-201ENST00000311626 GALNT18Q6P9A2 607 aa24.7■■□□□ 1.55
HOXB3-201ENST00000311626 DOK6Q6PKX4 331 aa24.7■■□□□ 1.55
HOXB3-201ENST00000311626 UBE2R2Q712K3 238 aaPredicted RBP24.7■■□□□ 1.55
HOXB3-201ENST00000311626 PIWIL3Q7Z3Z3 882 aaKnown RBP24.7■■□□□ 1.55
HOXB3-201ENST00000311626 ASIC4Q96FT7 647 aa24.7■■□□□ 1.55
HOXB3-201ENST00000311626 ATG10Q9H0Y0 220 aa24.7■■□□□ 1.55
HOXB3-201ENST00000311626 TRBV5-3A0A0A0MS03 114 aa24.7■■□□□ 1.54
HOXB3-201ENST00000311626 PRAMEF4O60810 478 aa24.7■■□□□ 1.54
HOXB3-201ENST00000311626 ABLIM3O94929 683 aa24.7■■□□□ 1.54
HOXB3-201ENST00000311626 WDR47O94967 919 aa24.7■■□□□ 1.54
HOXB3-201ENST00000311626 SCELO95171 688 aa24.7■■□□□ 1.54
HOXB3-201ENST00000311626 ANXA5P08758 320 aa24.7■■□□□ 1.54
HOXB3-201ENST00000311626 C21orf59P57076 290 aa24.7■■□□□ 1.54
HOXB3-201ENST00000311626 SIM2Q14190 667 aaPredicted RBP24.7■■□□□ 1.54
HOXB3-201ENST00000311626 PRAMEF9Q5VWM5 478 aa24.7■■□□□ 1.54
HOXB3-201ENST00000311626 RETSATQ6NUM9 610 aa24.7■■□□□ 1.54
HOXB3-201ENST00000311626 GPR149Q86SP6 731 aa24.7■■□□□ 1.54
HOXB3-201ENST00000311626 BBS7Q8IWZ6 715 aa24.7■■□□□ 1.54
HOXB3-201ENST00000311626 SLC15A4Q8N697 577 aa24.7■■□□□ 1.54
HOXB3-201ENST00000311626 PNPT1Q8TCS8 783 aaKnown RBP24.7■■□□□ 1.54
HOXB3-201ENST00000311626 C2orf49Q9BVC5 232 aaPredicted RBP24.7■■□□□ 1.54
HOXB3-201ENST00000311626 BBS2Q9BXC9 721 aa24.7■■□□□ 1.54
HOXB3-201ENST00000311626 ELOVL6Q9H5J4 265 aa24.7■■□□□ 1.54
HOXB3-201ENST00000311626 INTS6Q9UL03 887 aaKnown RBP24.7■■□□□ 1.54
HOXB3-201ENST00000311626 PER2O15055 1255 aa24.69■■□□□ 1.54
HOXB3-201ENST00000311626 FTH1P02794 183 aa24.69■■□□□ 1.54
HOXB3-201ENST00000311626 GRSF1Q12849 480 aaKnown RBP eCLIP24.69■■□□□ 1.54
HOXB3-201ENST00000311626 BOP1Q14137 746 aaKnown RBP24.69■■□□□ 1.54
HOXB3-201ENST00000311626 VEPH1Q14D04 833 aa24.69■■□□□ 1.54
HOXB3-201ENST00000311626 SPCS2Q15005 226 aa24.69■■□□□ 1.54
HOXB3-201ENST00000311626 CARD16Q5EG05 197 aa24.69■■□□□ 1.54
HOXB3-201ENST00000311626 Q6ZNX1 250 aa24.69■■□□□ 1.54
HOXB3-201ENST00000311626 CROCCP3Q8IVE0 287 aa24.69■■□□□ 1.54
HOXB3-201ENST00000311626 AADATQ8N5Z0 425 aa24.69■■□□□ 1.54
HOXB3-201ENST00000311626 PLEKHA8Q96JA3 519 aa24.69■■□□□ 1.54
HOXB3-201ENST00000311626 RBM4BQ9BQ04 359 aaKnown RBP24.69■■□□□ 1.54
HOXB3-201ENST00000311626 RBM4Q9BWF3 364 aaKnown RBP24.69■■□□□ 1.54
HOXB3-201ENST00000311626 TMEFF2Q9UIK5 374 aaPredicted RBP24.69■■□□□ 1.54
HOXB3-201ENST00000311626 BCL10O95999 233 aa24.69■■□□□ 1.54
HOXB3-201ENST00000311626 INHAP05111 366 aa24.69■■□□□ 1.54
HOXB3-201ENST00000311626 INHBBP09529 407 aa24.69■■□□□ 1.54
HOXB3-201ENST00000311626 GZMMP51124 257 aa24.69■■□□□ 1.54
HOXB3-201ENST00000311626 AQP6Q13520 282 aa24.69■■□□□ 1.54
HOXB3-201ENST00000311626 CBX2Q14781 532 aaPredicted RBP24.69■■□□□ 1.54
HOXB3-201ENST00000311626 SKIV2LQ15477 1246 aaKnown RBP24.69■■□□□ 1.54
HOXB3-201ENST00000311626 SERPINA13PQ6UXR4 307 aa24.69■■□□□ 1.54
HOXB3-201ENST00000311626 ZNF783Q6ZMS7 281 aa24.69■■□□□ 1.54
HOXB3-201ENST00000311626 EID3Q8N140 333 aa24.69■■□□□ 1.54
HOXB3-201ENST00000311626 GLB1L3Q8NCI6 653 aaPredicted RBP24.69■■□□□ 1.54
HOXB3-201ENST00000311626 HTATIP2Q9BUP3 242 aa24.69■■□□□ 1.54
HOXB3-201ENST00000311626 ABCG2Q9UNQ0 655 aa24.69■■□□□ 1.54
HOXB3-201ENST00000311626 BACE2Q9Y5Z0 518 aa24.69■■□□□ 1.54
HOXB3-201ENST00000311626 MYO1GB0I1T2 1018 aa24.68■■□□□ 1.54
HOXB3-201ENST00000311626 KRT6AP02538 564 aa24.68■■□□□ 1.54
HOXB3-201ENST00000311626 KRT6BP04259 564 aa24.68■■□□□ 1.54
HOXB3-201ENST00000311626 KRT6CP48668 564 aa24.68■■□□□ 1.54
HOXB3-201ENST00000311626 ATP1A4Q13733 1029 aa24.68■■□□□ 1.54
HOXB3-201ENST00000311626 RBM48Q5RL73 367 aaKnown RBP24.68■■□□□ 1.54
HOXB3-201ENST00000311626 NEK5Q6P3R8 708 aa24.68■■□□□ 1.54
HOXB3-201ENST00000311626 C16orf87Q6PH81 154 aa24.68■■□□□ 1.54
HOXB3-201ENST00000311626 DCP2Q8IU60 420 aaKnown RBP24.68■■□□□ 1.54
HOXB3-201ENST00000311626 HDAC2Q92769 488 aaKnown RBP24.68■■□□□ 1.54
HOXB3-201ENST00000311626 TUBA1CQ9BQE3 449 aa24.68■■□□□ 1.54
HOXB3-201ENST00000311626 FUNDC2Q9BWH2 189 aa24.68■■□□□ 1.54
HOXB3-201ENST00000311626 STOML2Q9UJZ1 356 aa24.68■■□□□ 1.54
HOXB3-201ENST00000311626 SLC22A14Q9Y267 594 aa24.68■■□□□ 1.54
HOXB3-201ENST00000311626 hCG_2039718K7EN88 272 aa24.68■■□□□ 1.54
HOXB3-201ENST00000311626 HPRP00739 348 aa24.68■■□□□ 1.54
HOXB3-201ENST00000311626 SDC1P18827 310 aa24.68■■□□□ 1.54
HOXB3-201ENST00000311626 HTR1BP28222 390 aa24.68■■□□□ 1.54
HOXB3-201ENST00000311626 FMO3P31513 532 aa24.68■■□□□ 1.54
HOXB3-201ENST00000311626 CA8P35219 290 aa24.68■■□□□ 1.54
HOXB3-201ENST00000311626 IL5RAQ01344 420 aa24.68■■□□□ 1.54
HOXB3-201ENST00000311626 RAPSNQ13702 412 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms