RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 KCNE4Q8WWG9 221 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 SMARCD2Q92925 531 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 LPPQ93052 612 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 BCL2L14Q9BZR8 327 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 WASF3Q9UPY6 502 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 TRPM7Q96QT4 1865 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 NRAPQ86VF7 1730 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 DOCK7Q96N67 2140 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 RTCAO00442 366 aaKnown RBP3.13□□□□□ -1.91
CLOCK-201ENST00000309964 SLC30A4O14863 429 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 PCDH17O14917 1159 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 OR1F1O43749 312 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 PPM1BO75688 479 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 PTHP01270 115 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 PRKAR1AP10644 381 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 RBBP4Q09028 425 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 C15orf59Q2T9L4 293 aaPredicted RBP3.13□□□□□ -1.91
CLOCK-201ENST00000309964 LDLRAD1Q5T700 205 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 TMIGD1Q6UXZ0 262 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 RASSF6Q6ZTQ3 369 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 DET1Q7L5Y6 550 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 RAB43Q86YS6 212 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 ZC3H7AQ8IWR0 971 aaKnown RBP3.13□□□□□ -1.91
CLOCK-201ENST00000309964 OR4A15Q8NGL6 344 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 C9orf43Q8TAL5 461 aaPredicted RBP3.13□□□□□ -1.91
CLOCK-201ENST00000309964 UCN3Q969E3 161 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 TOP1MTQ969P6 601 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 IGSF21Q96ID5 467 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 TMEM74Q96NL1 305 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 SLC2A13Q96QE2 648 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 DUSP9Q99956 384 aaKnown RBP3.13□□□□□ -1.91
CLOCK-201ENST00000309964 MRI1Q9BV20 369 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 CARS2Q9HA77 564 aaKnown RBP3.13□□□□□ -1.91
CLOCK-201ENST00000309964 YIPF1Q9Y548 306 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 IGKV6D-41A0A0C4DH26 115 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 KIR2DS5A0A0G2JLQ3 304 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 A0A0G2JNG1 304 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 LCHNA4D1U4 455 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 KIR2DS3K7RE56 304 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 GFRA2O00451 464 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 TPD52L2O43399 206 aaKnown RBP3.12□□□□□ -1.91
CLOCK-201ENST00000309964 GRID2O43424 1007 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 PCCBP05166 539 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 GLULP15104 373 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 RPL17P18621 184 aaKnown RBP3.12□□□□□ -1.91
CLOCK-201ENST00000309964 STOMP27105 288 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 ADSSP30520 456 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 EIF2DP41214 584 aaKnown RBP3.12□□□□□ -1.91
CLOCK-201ENST00000309964 ZNF41P51814 821 aaPredicted RBP3.12□□□□□ -1.91
CLOCK-201ENST00000309964 CASP5P51878 434 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 ATP12AP54707 1039 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 INHBCP55103 352 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 TAS2R43P59537 309 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 SRP54P61011 504 aaKnown RBP3.12□□□□□ -1.91
CLOCK-201ENST00000309964 PLGLB1Q02325 96 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 RIPK1Q13546 671 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 KIR2DS5Q14953 304 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 TAF5Q15542 800 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 PTPN20Q4JDL3 420 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 CCDC92Q53HC0 331 aaPredicted RBP3.12□□□□□ -1.91
CLOCK-201ENST00000309964 ANO7Q6IWH7 933 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 MTDHQ86UE4 582 aaKnown RBP3.12□□□□□ -1.91
CLOCK-201ENST00000309964 AMIGO1Q86WK6 493 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 IFNLR1Q8IU57 520 aaPredicted RBP3.12□□□□□ -1.91
CLOCK-201ENST00000309964 CMTM8Q8IZV2 173 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 PLD6Q8N2A8 252 aaKnown RBP3.12□□□□□ -1.91
CLOCK-201ENST00000309964 PLD5Q8N7P1 536 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 OR2T12Q8NG77 320 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 TRIB2Q92519 343 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 PSMG2Q969U7 264 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 MCRS1Q96EZ8 462 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 NAA11Q9BSU3 229 aaPredicted RBP3.12□□□□□ -1.91
CLOCK-201ENST00000309964 ASB6Q9NWX5 421 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 KLHL42Q9P2K6 505 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 VPS29Q9UBQ0 182 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 CNTN6Q9UQ52 1028 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 HES2Q9Y543 173 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 GMEB1Q9Y692 573 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 TCRBV9S1A1TA0A576 114 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 OR5K3A6NET4 321 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 KDELR3O43731 214 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 FADS2O95864 444 aaKnown RBP3.12□□□□□ -1.91
CLOCK-201ENST00000309964 TOP3BO95985 862 aaKnown RBP3.12□□□□□ -1.91
CLOCK-201ENST00000309964 THEGLP0DJG4 465 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 CXCR1P25024 350 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 GNALP38405 381 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 BRCC3P46736 316 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 RPS15AP62244 130 aaKnown RBP3.12□□□□□ -1.91
CLOCK-201ENST00000309964 RPL7AP62424 266 aaKnown RBP3.12□□□□□ -1.91
CLOCK-201ENST00000309964 E2F1Q01094 437 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 ITGB3BPQ13352 177 aaPredicted RBP3.12□□□□□ -1.91
CLOCK-201ENST00000309964 C2orf27AQ580R0 203 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 OTUD3Q5T2D3 398 aaPredicted RBP3.12□□□□□ -1.91
CLOCK-201ENST00000309964 PIK3R6Q5UE93 754 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 THAP5Q7Z6K1 395 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 XYLT1Q86Y38 959 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 RASGEF1CQ8N431 466 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 KIAA1958Q8N8K9 716 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 OR2AJ1Q8NGZ0 328 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 ZNF296Q8WUU4 475 aaPredicted RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms