RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 ERVFC1P60507 584 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 ADRM1Q16186 407 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 CYBRD1Q53TN4 286 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 CYP2U1Q7Z449 544 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 C10orf111Q8N326 155 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 ISG20Q96AZ6 181 aaKnown RBP11.26□□□□□ -0.61
PTPN2-201ENST00000309660 SLC47A1Q96FL8 570 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 WRAP53Q9BUR4 548 aaKnown RBP11.26□□□□□ -0.61
PTPN2-201ENST00000309660 EPB41L1Q9H4G0 881 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 TRPS1Q9UHF7 1281 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 TMPRSS11EQ9UL52 423 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 SNX6Q9UNH7 406 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 ITM2BQ9Y287 266 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 CFAP99D6REC4 459 aa11.25□□□□□ -0.61
PTPN2-201ENST00000309660 ARNTLO00327 626 aa11.25□□□□□ -0.61
PTPN2-201ENST00000309660 KPNA3O00505 521 aaPredicted RBP11.25□□□□□ -0.61
PTPN2-201ENST00000309660 C1QCP02747 245 aa11.25□□□□□ -0.61
PTPN2-201ENST00000309660 IL6P05231 212 aa11.25□□□□□ -0.61
PTPN2-201ENST00000309660 CTSAP10619 480 aa11.25□□□□□ -0.61
PTPN2-201ENST00000309660 EPORP19235 508 aa11.25□□□□□ -0.61
PTPN2-201ENST00000309660 CYP2A7P20853 494 aa11.25□□□□□ -0.61
PTPN2-201ENST00000309660 NNMTP40261 264 aa11.25□□□□□ -0.61
PTPN2-201ENST00000309660 ARSFP54793 590 aa11.25□□□□□ -0.61
PTPN2-201ENST00000309660 PRMT2P55345 433 aa11.25□□□□□ -0.61
PTPN2-201ENST00000309660 GTF2H3Q13889 308 aa11.25□□□□□ -0.61
PTPN2-201ENST00000309660 SPIDRQ14159 915 aa11.25□□□□□ -0.61
PTPN2-201ENST00000309660 NKG7Q16617 165 aa11.25□□□□□ -0.61
PTPN2-201ENST00000309660 XKR6Q5GH73 641 aa11.25□□□□□ -0.61
PTPN2-201ENST00000309660 MPP7Q5T2T1 576 aa11.25□□□□□ -0.61
PTPN2-201ENST00000309660 CBARPQ8N350 705 aaPredicted RBP11.25□□□□□ -0.61
PTPN2-201ENST00000309660 TNIP2Q8NFZ5 429 aa11.25□□□□□ -0.61
PTPN2-201ENST00000309660 OR2A12Q8NGT7 310 aa11.25□□□□□ -0.61
PTPN2-201ENST00000309660 NTMT1Q9BV86 223 aa11.25□□□□□ -0.61
PTPN2-201ENST00000309660 EMILIN2Q9BXX0 1053 aa11.25□□□□□ -0.61
PTPN2-201ENST00000309660 PCDH12Q9NPG4 1184 aa11.25□□□□□ -0.61
PTPN2-201ENST00000309660 EXD2Q9NVH0 621 aa11.25□□□□□ -0.61
PTPN2-201ENST00000309660 CDC14AQ9UNH5 594 aa11.25□□□□□ -0.61
PTPN2-201ENST00000309660 HS3ST2Q9Y278 367 aa11.25□□□□□ -0.61
PTPN2-201ENST00000309660 G3V2T6 193 aa11.25□□□□□ -0.61
PTPN2-201ENST00000309660 RFXANKO14593 260 aa11.25□□□□□ -0.61
PTPN2-201ENST00000309660 SERPINA1P01009 418 aa11.25□□□□□ -0.61
PTPN2-201ENST00000309660 NPPAP01160 153 aa11.25□□□□□ -0.61
PTPN2-201ENST00000309660 POLR2EP19388 210 aaKnown RBP11.25□□□□□ -0.61
PTPN2-201ENST00000309660 MYF6P23409 242 aa11.25□□□□□ -0.61
PTPN2-201ENST00000309660 AOAHP28039 575 aa11.25□□□□□ -0.61
PTPN2-201ENST00000309660 CDKN2CP42773 168 aa11.25□□□□□ -0.61
PTPN2-201ENST00000309660 POLR2LP62875 67 aaKnown RBP11.25□□□□□ -0.61
PTPN2-201ENST00000309660 PHC1P78364 1004 aa11.25□□□□□ -0.61
PTPN2-201ENST00000309660 GPR107Q5VW38 600 aa11.25□□□□□ -0.61
PTPN2-201ENST00000309660 SPRED1Q7Z699 444 aa11.25□□□□□ -0.61
PTPN2-201ENST00000309660 METTL3Q86U44 580 aaKnown RBP11.25□□□□□ -0.61
PTPN2-201ENST00000309660 TRIM74Q86UV6 250 aa11.25□□□□□ -0.61
PTPN2-201ENST00000309660 MSRB3Q8IXL7 192 aa11.25□□□□□ -0.61
PTPN2-201ENST00000309660 FAM217AQ8IXS0 508 aa11.25□□□□□ -0.61
PTPN2-201ENST00000309660 UGT2B28Q9BY64 529 aa11.25□□□□□ -0.61
PTPN2-201ENST00000309660 ZBP1Q9H171 429 aa11.25□□□□□ -0.61
PTPN2-201ENST00000309660 TDP1Q9NUW8 608 aa11.25□□□□□ -0.61
PTPN2-201ENST00000309660 GPRC5BQ9NZH0 403 aa11.25□□□□□ -0.61
PTPN2-201ENST00000309660 EBF1Q9UH73 591 aa11.25□□□□□ -0.61
PTPN2-201ENST00000309660 HS6ST1O60243 411 aa11.25□□□□□ -0.61
PTPN2-201ENST00000309660 NAE1Q13564 534 aa11.25□□□□□ -0.61
PTPN2-201ENST00000309660 USP39Q53GS9 565 aaKnown RBP11.25□□□□□ -0.61
PTPN2-201ENST00000309660 DOK6Q6PKX4 331 aa11.25□□□□□ -0.61
PTPN2-201ENST00000309660 ANGPTL8Q6UXH0 198 aa11.25□□□□□ -0.61
PTPN2-201ENST00000309660 ZNF621Q6ZSS3 439 aa11.25□□□□□ -0.61
PTPN2-201ENST00000309660 GPR180Q86V85 440 aa11.25□□□□□ -0.61
PTPN2-201ENST00000309660 SYT12Q8IV01 421 aa11.25□□□□□ -0.61
PTPN2-201ENST00000309660 GPR156Q8NFN8 814 aa11.25□□□□□ -0.61
PTPN2-201ENST00000309660 OR8J3Q8NGG0 315 aa11.25□□□□□ -0.61
PTPN2-201ENST00000309660 IRF7Q92985 503 aa11.25□□□□□ -0.61
PTPN2-201ENST00000309660 DNAJC11Q9NVH1 559 aa11.25□□□□□ -0.61
PTPN2-201ENST00000309660 ST14Q9Y5Y6 855 aa11.25□□□□□ -0.61
PTPN2-201ENST00000309660 MYO1GB0I1T2 1018 aa11.24□□□□□ -0.61
PTPN2-201ENST00000309660 AREL1O15033 823 aa11.24□□□□□ -0.61
PTPN2-201ENST00000309660 FOXD2O60548 495 aaPredicted RBP11.24□□□□□ -0.61
PTPN2-201ENST00000309660 DIRAS1O95057 198 aa11.24□□□□□ -0.61
PTPN2-201ENST00000309660 SDC1P18827 310 aa11.24□□□□□ -0.61
PTPN2-201ENST00000309660 CSNK1DP48730 415 aa11.24□□□□□ -0.61
PTPN2-201ENST00000309660 KIAA0040Q15053 153 aa11.24□□□□□ -0.61
PTPN2-201ENST00000309660 ACOX1Q15067 660 aa11.24□□□□□ -0.61
PTPN2-201ENST00000309660 CCSMST1Q4G0I0 132 aa11.24□□□□□ -0.61
PTPN2-201ENST00000309660 ADNP2Q6IQ32 1131 aa11.24□□□□□ -0.61
PTPN2-201ENST00000309660 TRIM46Q7Z4K8 759 aa11.24□□□□□ -0.61
PTPN2-201ENST00000309660 CACUL1Q86Y37 369 aa11.24□□□□□ -0.61
PTPN2-201ENST00000309660 GOLM1Q8NBJ4 401 aa11.24□□□□□ -0.61
PTPN2-201ENST00000309660 ZNF548Q8NEK5 533 aaPredicted RBP11.24□□□□□ -0.61
PTPN2-201ENST00000309660 CFHR5Q9BXR6 569 aa11.24□□□□□ -0.61
PTPN2-201ENST00000309660 CLMPQ9H6B4 373 aa11.24□□□□□ -0.61
PTPN2-201ENST00000309660 NTN4Q9HB63 628 aa11.24□□□□□ -0.61
PTPN2-201ENST00000309660 VPS4AQ9UN37 437 aa11.24□□□□□ -0.61
PTPN2-201ENST00000309660 RANBP2P49792 3224 aaKnown RBP11.24□□□□□ -0.61
PTPN2-201ENST00000309660 TSPAN6O43657 245 aa11.24□□□□□ -0.61
PTPN2-201ENST00000309660 IL7RP16871 459 aa11.24□□□□□ -0.61
PTPN2-201ENST00000309660 CASP9P55211 416 aa11.24□□□□□ -0.61
PTPN2-201ENST00000309660 FRG2Q64ET8 278 aa11.24□□□□□ -0.61
PTPN2-201ENST00000309660 TMEM215Q68D42 235 aa11.24□□□□□ -0.61
PTPN2-201ENST00000309660 PATL1Q86TB9 770 aaKnown RBP11.24□□□□□ -0.61
PTPN2-201ENST00000309660 GLB1L3Q8NCI6 653 aaPredicted RBP11.24□□□□□ -0.61
PTPN2-201ENST00000309660 OR7A2PQ8NGA2 310 aa11.24□□□□□ -0.61
PTPN2-201ENST00000309660 HM13Q8TCT9 377 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms