RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 GBE1Q04446 702 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 TBL3Q12788 808 aaKnown RBP4.83□□□□□ -1.64
CKS1B-201ENST00000308987 IFRD2Q12894 506 aaPredicted RBP4.83□□□□□ -1.64
CKS1B-201ENST00000308987 SLC10A2Q12908 348 aaPredicted RBP4.83□□□□□ -1.64
CKS1B-201ENST00000308987 GRIK2Q13002 908 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 PRKAA1Q13131 559 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 MSLNQ13421 630 aaPredicted RBP4.83□□□□□ -1.64
CKS1B-201ENST00000308987 PDK3Q15120 406 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 TRIP6Q15654 476 aaKnown RBP4.83□□□□□ -1.64
CKS1B-201ENST00000308987 CA9Q16790 459 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 SLC25A52Q3SY17 297 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 MMEL1Q495T6 779 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 CFAP157Q5JU67 520 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 EOGTQ5NDL2 527 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 NCBP2-AS2Q69YL0 99 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 UGT2A3Q6UWM9 527 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 C6orf15Q6UXA7 325 aaPredicted RBP4.83□□□□□ -1.64
CKS1B-201ENST00000308987 DPH6Q7L8W6 267 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 MAVSQ7Z434 540 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 ARHGAP22Q7Z5H3 698 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 TMEM135Q86UB9 458 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 TICAM1Q8IUC6 712 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 C10orf107Q8IVU9 208 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 CCDC117Q8IWD4 279 aaPredicted RBP4.83□□□□□ -1.64
CKS1B-201ENST00000308987 DEFB107AQ8IZN7 70 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 PQLC1Q8N2U9 271 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 MPP5Q8N3R9 675 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 CNTD1Q8N815 330 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 FAM169BQ8N8A8 192 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 KIAA1958Q8N8K9 716 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 TERB1Q8NA31 727 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 DRAXINQ8NBI3 349 aaPredicted RBP4.83□□□□□ -1.64
CKS1B-201ENST00000308987 SLC26A7Q8TE54 656 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 TRPC4APQ8TEL6 797 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 NAT14Q8WUY8 206 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 NT5C3BQ969T7 300 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 NTAN1Q96AB6 310 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 PPP1R14BQ96C90 147 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 CERS2Q96G23 380 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 DUS3LQ96G46 650 aaKnown RBP4.83□□□□□ -1.64
CKS1B-201ENST00000308987 ZNF419Q96HQ0 510 aaPredicted RBP4.83□□□□□ -1.64
CKS1B-201ENST00000308987 CLPTM1LQ96KA5 538 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 MRGPRX3Q96LB0 322 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 C8orf48Q96LL4 319 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 PPP1R2P1Q96PQ5 205 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 VAT1Q99536 393 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 MRPS26Q9BYN8 205 aaKnown RBP4.83□□□□□ -1.64
CKS1B-201ENST00000308987 ILKAPQ9H0C8 392 aaPredicted RBP4.83□□□□□ -1.64
CKS1B-201ENST00000308987 SLC32A1Q9H598 525 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 DHX35Q9H5Z1 703 aaKnown RBP4.83□□□□□ -1.64
CKS1B-201ENST00000308987 ZNF696Q9H7X3 374 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 UGT1A7Q9HAW7 530 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 UGT1A10Q9HAW8 530 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 UGT1A8Q9HAW9 530 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 LRRC4Q9HBW1 653 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 CASS4Q9NQ75 786 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 GPATCH2LQ9NWQ4 482 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 OXSMQ9NWU1 459 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 OSER1Q9NX31 292 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 UTP6Q9NYH9 597 aaKnown RBP4.83□□□□□ -1.64
CKS1B-201ENST00000308987 RRN3Q9NYV6 651 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.83□□□□□ -1.64
CKS1B-201ENST00000308987 ATXN10Q9UBB4 475 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 HMGXB4Q9UGU5 601 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 TRHDEQ9UKU6 1024 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 FZD10Q9ULW2 581 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 BTBD3Q9Y2F9 522 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 DTNAQ9Y4J8 743 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 NBASA2RRP1 2371 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 UBR5O95071 2799 aaPredicted RBP4.82□□□□□ -1.64
CKS1B-201ENST00000308987 PRSS51A0A1B0GVH4 220 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 ARHGAP10A1A4S6 786 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 FAM92AA1XBS5 289 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 TBC1D3BA6NDS4 549 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 TRPC5OSA6NMA1 111 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 G3V2L1 256 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 H0Y626 953 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 H3BNX3 289 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 RNF103O00237 685 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 MATN2O00339 956 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 SLC9A3R1O14745 358 aaPredicted RBP4.82□□□□□ -1.64
CKS1B-201ENST00000308987 XPO1O14980 1071 aaKnown RBP4.82□□□□□ -1.64
CKS1B-201ENST00000308987 CREB3O43889 395 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 CACNG3O60359 315 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 LYPLA1O75608 230 aaPredicted RBP4.82□□□□□ -1.64
CKS1B-201ENST00000308987 BCAS2O75934 225 aaPredicted RBP4.82□□□□□ -1.64
CKS1B-201ENST00000308987 C1QL1O75973 258 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 TRIM16O95361 564 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 HSPA4LO95757 839 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 PRB1P04280 392 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 C1SP09871 688 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 ATXN1LP0C7T5 689 aaKnown RBP4.82□□□□□ -1.64
CKS1B-201ENST00000308987 ZCCHC18P0CG32 403 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 IRF1P10914 325 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 NCF2P19878 526 aaPredicted RBP4.82□□□□□ -1.64
CKS1B-201ENST00000308987 MGAT1P26572 445 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 YWHAQP27348 245 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 SERPINB6P35237 376 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 GNL1P36915 607 aaPredicted RBP4.82□□□□□ -1.64
CKS1B-201ENST00000308987 PPARGP37231 505 aaPredicted RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms