RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 UBAP2LQ14157 1087 aaKnown RBP6.77□□□□□ -1.33
PTCD2-201ENST00000308077 GRB7Q14451 532 aa6.77□□□□□ -1.33
PTCD2-201ENST00000308077 LACTB2Q53H82 288 aaPredicted RBP6.77□□□□□ -1.33
PTCD2-201ENST00000308077 TCHHL1Q5QJ38 904 aaPredicted RBP6.77□□□□□ -1.33
PTCD2-201ENST00000308077 TMEM198Q66K66 360 aa6.77□□□□□ -1.33
PTCD2-201ENST00000308077 METTL2BQ6P1Q9 378 aaKnown RBP6.77□□□□□ -1.33
PTCD2-201ENST00000308077 ENPP7Q6UWV6 458 aa6.77□□□□□ -1.33
PTCD2-201ENST00000308077 ABI3BPQ7Z7G0 1075 aa6.77□□□□□ -1.33
PTCD2-201ENST00000308077 TREML1Q86YW5 311 aa6.77□□□□□ -1.33
PTCD2-201ENST00000308077 GALNT13Q8IUC8 556 aa6.77□□□□□ -1.33
PTCD2-201ENST00000308077 SLC22A18ASQ8N1D0 253 aa6.77□□□□□ -1.33
PTCD2-201ENST00000308077 TCAIMQ8N3R3 496 aa6.77□□□□□ -1.33
PTCD2-201ENST00000308077 LMNTD1Q8N9Z9 388 aa6.77□□□□□ -1.33
PTCD2-201ENST00000308077 PPFIBP2Q8ND30 876 aa6.77□□□□□ -1.33
PTCD2-201ENST00000308077 OR13H1Q8NG92 308 aa6.77□□□□□ -1.33
PTCD2-201ENST00000308077 OR4F6Q8NGB9 312 aa6.77□□□□□ -1.33
PTCD2-201ENST00000308077 OR5AR1Q8NGP9 310 aa6.77□□□□□ -1.33
PTCD2-201ENST00000308077 TWIST2Q8WVJ9 160 aa6.77□□□□□ -1.33
PTCD2-201ENST00000308077 CCDC138Q96M89 665 aa6.77□□□□□ -1.33
PTCD2-201ENST00000308077 WDR92Q96MX6 357 aa6.77□□□□□ -1.33
PTCD2-201ENST00000308077 FOPNLQ96NB1 174 aa6.77□□□□□ -1.33
PTCD2-201ENST00000308077 NRTNQ99748 197 aa6.77□□□□□ -1.33
PTCD2-201ENST00000308077 CCDC106Q9BWC9 280 aa6.77□□□□□ -1.33
PTCD2-201ENST00000308077 SLC32A1Q9H598 525 aa6.77□□□□□ -1.33
PTCD2-201ENST00000308077 RMI1Q9H9A7 625 aa6.77□□□□□ -1.33
PTCD2-201ENST00000308077 SAR1AQ9NR31 198 aa6.77□□□□□ -1.33
PTCD2-201ENST00000308077 SLC12A4Q9UP95 1085 aa6.77□□□□□ -1.33
PTCD2-201ENST00000308077 APOBEC2Q9Y235 224 aaKnown RBP6.77□□□□□ -1.33
PTCD2-201ENST00000308077 INVSQ9Y283 1065 aa6.77□□□□□ -1.33
PTCD2-201ENST00000308077 BTRCQ9Y297 605 aa6.77□□□□□ -1.33
PTCD2-201ENST00000308077 WDR37Q9Y2I8 494 aa6.77□□□□□ -1.33
PTCD2-201ENST00000308077 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.77□□□□□ -1.33
PTCD2-201ENST00000308077 GPSM3Q9Y4H4 160 aa6.77□□□□□ -1.33
PTCD2-201ENST00000308077 HS3ST3A1Q9Y663 406 aa6.77□□□□□ -1.33
PTCD2-201ENST00000308077 CFAP20Q9Y6A4 193 aaKnown RBP6.77□□□□□ -1.33
PTCD2-201ENST00000308077 TRPC5OSA6NMA1 111 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 CAPN14A8MX76 684 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 PRR5-ARHGAP8B1AHC4 643 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 PRAMEF26H0Y7S4 382 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 K7ESF4 209 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 MYO1CO00159 1063 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 PRAMEF4O60810 478 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 KATNA1O75449 491 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 KIAA0754O94854 1291 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 WDR47O94967 919 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 CBX6O95503 412 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 SLC16A8O95907 504 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 UROSP10746 265 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 ITPKAP23677 461 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 HTR6P50406 440 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 CCR3P51677 355 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 CLCNKAP51800 687 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 CCNG1P51959 295 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 PKNOX1P55347 436 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 ZXDAP98168 799 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 PRAMEF9Q5VWM5 478 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 FAM91A1Q658Y4 838 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 CWF19L1Q69YN2 538 aaKnown RBP6.76□□□□□ -1.33
PTCD2-201ENST00000308077 CAPRIN2Q6IMN6 1127 aaKnown RBP6.76□□□□□ -1.33
PTCD2-201ENST00000308077 DUS1LQ6P1R4 473 aaKnown RBP6.76□□□□□ -1.33
PTCD2-201ENST00000308077 AGTRAPQ6RW13 159 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 UNC5DQ6UXZ4 953 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 Q6ZSR6 202 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 LRRC70Q7Z2Q7 622 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 KLHDC8AQ8IYD2 350 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 KIRREL3Q8IZU9 778 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 AFAP1L2Q8N4X5 818 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 DEFB119Q8N690 84 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 CDYL2Q8N8U2 506 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 GBP7Q8N8V2 638 aaPredicted RBP6.76□□□□□ -1.33
PTCD2-201ENST00000308077 PHC3Q8NDX5 983 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 ZNF480Q8WV37 535 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 TSACCQ96A04 125 aaPredicted RBP6.76□□□□□ -1.33
PTCD2-201ENST00000308077 C19orf60Q96EN9 201 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 MARK4Q96L34 752 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 OR2M4Q96R27 311 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 CCDC28BQ9BUN5 200 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 NTMT1Q9BV86 223 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 NUSAP1Q9BXS6 441 aaKnown RBP6.76□□□□□ -1.33
PTCD2-201ENST00000308077 OSGEPL1Q9H4B0 414 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 ZNF385DQ9H6B1 395 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 CARS2Q9HA77 564 aaKnown RBP6.76□□□□□ -1.33
PTCD2-201ENST00000308077 INTS7Q9NVH2 962 aaKnown RBP6.76□□□□□ -1.33
PTCD2-201ENST00000308077 ARL8BQ9NVJ2 186 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 DLGAP2Q9P1A6 1054 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 GIMAP2Q9UG22 337 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 TRIM33Q9UPN9 1127 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 SLC22A14Q9Y267 594 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 SIT1Q9Y3P8 196 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 FANCMQ8IYD8 2048 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 ATP6AP2A0A1C7CYW4 349 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 A0A1W2PPC4 97 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 KLHL33A6NCF5 533 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 PABPN1LA6NDY0 278 aaKnown RBP6.76□□□□□ -1.33
PTCD2-201ENST00000308077 PI15O43692 258 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 CCDC22O60826 627 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 ATP6AP2O75787 350 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 OTCP00480 354 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 CAPN1P07384 714 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 LINC00032P0C843 101 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms