RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 BDKRB1P46663 353 aa11.56□□□□□ -0.56
TRIM40-205ENST00000307859 RPS21P63220 83 aaKnown RBP11.56□□□□□ -0.56
TRIM40-205ENST00000307859 EMX2Q04743 252 aa11.56□□□□□ -0.56
TRIM40-205ENST00000307859 PCDH1Q08174 1060 aa11.56□□□□□ -0.56
TRIM40-205ENST00000307859 GRSF1Q12849 480 aaKnown RBP eCLIP11.56□□□□□ -0.56
TRIM40-205ENST00000307859 IRF4Q15306 451 aa11.56□□□□□ -0.56
TRIM40-205ENST00000307859 CCSMST1Q4G0I0 132 aa11.56□□□□□ -0.56
TRIM40-205ENST00000307859 PIGGQ5H8A4 983 aa11.56□□□□□ -0.56
TRIM40-205ENST00000307859 COQ5Q5HYK3 327 aa11.56□□□□□ -0.56
TRIM40-205ENST00000307859 C1orf146Q5VVC0 180 aa11.56□□□□□ -0.56
TRIM40-205ENST00000307859 C8orf82Q6P1X6 216 aaPredicted RBP11.56□□□□□ -0.56
TRIM40-205ENST00000307859 CRTC3Q6UUV7 619 aa11.56□□□□□ -0.56
TRIM40-205ENST00000307859 SLC44A3Q8N4M1 653 aa11.56□□□□□ -0.56
TRIM40-205ENST00000307859 OXR1Q8N573 874 aa11.56□□□□□ -0.56
TRIM40-205ENST00000307859 OR56A3Q8NH54 315 aa11.56□□□□□ -0.56
TRIM40-205ENST00000307859 FOXJ1Q92949 421 aa11.56□□□□□ -0.56
TRIM40-205ENST00000307859 C1QTNF2Q9BXJ5 285 aa11.56□□□□□ -0.56
TRIM40-205ENST00000307859 ACTR8Q9H981 624 aa11.56□□□□□ -0.56
TRIM40-205ENST00000307859 KCNK12Q9HB15 430 aa11.56□□□□□ -0.56
TRIM40-205ENST00000307859 SLC52A3Q9NQ40 469 aa11.56□□□□□ -0.56
TRIM40-205ENST00000307859 ZIM2Q9NZV7 527 aa11.56□□□□□ -0.56
TRIM40-205ENST00000307859 NKX1-2Q9UD57 310 aaPredicted RBP11.56□□□□□ -0.56
TRIM40-205ENST00000307859 KLQ9UEF7 1012 aa11.56□□□□□ -0.56
TRIM40-205ENST00000307859 SLC22A14Q9Y267 594 aa11.56□□□□□ -0.56
TRIM40-205ENST00000307859 PCYT1BQ9Y5K3 369 aaPredicted RBP11.56□□□□□ -0.56
TRIM40-205ENST00000307859 LRP4O75096 1905 aa11.55□□□□□ -0.56
TRIM40-205ENST00000307859 NR5A2O00482 541 aa11.55□□□□□ -0.56
TRIM40-205ENST00000307859 MRASO14807 208 aa11.55□□□□□ -0.56
TRIM40-205ENST00000307859 FFAR3O14843 346 aa11.55□□□□□ -0.56
TRIM40-205ENST00000307859 GPR42O15529 346 aa11.55□□□□□ -0.56
TRIM40-205ENST00000307859 RGS14O43566 566 aa11.55□□□□□ -0.56
TRIM40-205ENST00000307859 PRAMEF4O60810 478 aa11.55□□□□□ -0.56
TRIM40-205ENST00000307859 ULK1O75385 1050 aa11.55□□□□□ -0.56
TRIM40-205ENST00000307859 PSMG1O95456 288 aa11.55□□□□□ -0.56
TRIM40-205ENST00000307859 C1orf105O95561 183 aa11.55□□□□□ -0.56
TRIM40-205ENST00000307859 KRT6AP02538 564 aa11.55□□□□□ -0.56
TRIM40-205ENST00000307859 KRT6BP04259 564 aa11.55□□□□□ -0.56
TRIM40-205ENST00000307859 ACADLP28330 430 aa11.55□□□□□ -0.56
TRIM40-205ENST00000307859 IMPA1P29218 277 aa11.55□□□□□ -0.56
TRIM40-205ENST00000307859 ZFP36L2P47974 494 aaKnown RBP11.55□□□□□ -0.56
TRIM40-205ENST00000307859 KRT6CP48668 564 aa11.55□□□□□ -0.56
TRIM40-205ENST00000307859 ADPRHP54922 357 aa11.55□□□□□ -0.56
TRIM40-205ENST00000307859 RPA4Q13156 261 aa11.55□□□□□ -0.56
TRIM40-205ENST00000307859 RCAN2Q14206 197 aa11.55□□□□□ -0.56
TRIM40-205ENST00000307859 RPS6KA2Q15349 733 aa11.55□□□□□ -0.56
TRIM40-205ENST00000307859 NR6A1Q15406 480 aa11.55□□□□□ -0.56
TRIM40-205ENST00000307859 MAP7D1Q3KQU3 841 aa11.55□□□□□ -0.56
TRIM40-205ENST00000307859 MMEL1Q495T6 779 aa11.55□□□□□ -0.56
TRIM40-205ENST00000307859 PRAMEF9Q5VWM5 478 aa11.55□□□□□ -0.56
TRIM40-205ENST00000307859 BLOC1S3Q6QNY0 202 aa11.55□□□□□ -0.56
TRIM40-205ENST00000307859 AGTRAPQ6RW13 159 aa11.55□□□□□ -0.56
TRIM40-205ENST00000307859 MYLK4Q86YV6 388 aaPredicted RBP11.55□□□□□ -0.56
TRIM40-205ENST00000307859 HPS6Q86YV9 775 aa11.55□□□□□ -0.56
TRIM40-205ENST00000307859 FNDC5Q8NAU1 212 aa11.55□□□□□ -0.56
TRIM40-205ENST00000307859 PYCR2Q96C36 320 aa11.55□□□□□ -0.56
TRIM40-205ENST00000307859 HBEGFQ99075 208 aa11.55□□□□□ -0.56
TRIM40-205ENST00000307859 PKP4Q99569 1192 aa11.55□□□□□ -0.56
TRIM40-205ENST00000307859 SERPINI1Q99574 410 aa11.55□□□□□ -0.56
TRIM40-205ENST00000307859 LGR4Q9BXB1 951 aa11.55□□□□□ -0.56
TRIM40-205ENST00000307859 ATG10Q9H0Y0 220 aa11.55□□□□□ -0.56
TRIM40-205ENST00000307859 MBNL1Q9NR56 388 aaKnown RBP11.55□□□□□ -0.56
TRIM40-205ENST00000307859 FARSBQ9NSD9 589 aaKnown RBP11.55□□□□□ -0.56
TRIM40-205ENST00000307859 ZNF490Q9ULM2 529 aaPredicted RBP11.55□□□□□ -0.56
TRIM40-205ENST00000307859 FZD4Q9ULV1 537 aa11.55□□□□□ -0.56
TRIM40-205ENST00000307859 POMPQ9Y244 141 aa11.55□□□□□ -0.56
TRIM40-205ENST00000307859 TMEM98Q9Y2Y6 226 aa11.55□□□□□ -0.56
TRIM40-205ENST00000307859 NDUFAF1Q9Y375 327 aa11.55□□□□□ -0.56
TRIM40-205ENST00000307859 PCDHGA7Q9Y5G6 932 aa11.55□□□□□ -0.56
TRIM40-205ENST00000307859 DNMT3AQ9Y6K1 912 aaPredicted RBP11.55□□□□□ -0.56
TRIM40-205ENST00000307859 TRIOO75962 3097 aa11.55□□□□□ -0.56
TRIM40-205ENST00000307859 ACACBO00763 2458 aa11.54□□□□□ -0.56
TRIM40-205ENST00000307859 A0A1W2PQU0 124 aa11.54□□□□□ -0.56
TRIM40-205ENST00000307859 SERTM1A2A2V5 107 aa11.54□□□□□ -0.56
TRIM40-205ENST00000307859 NPIPB8E9PQR5 432 aa11.54□□□□□ -0.56
TRIM40-205ENST00000307859 KRT36O76013 467 aa11.54□□□□□ -0.56
TRIM40-205ENST00000307859 SORBS2O94875 1100 aaKnown RBP11.54□□□□□ -0.56
TRIM40-205ENST00000307859 SLC16A8O95907 504 aa11.54□□□□□ -0.56
TRIM40-205ENST00000307859 GLULP15104 373 aa11.54□□□□□ -0.56
TRIM40-205ENST00000307859 CAPN3P20807 821 aa11.54□□□□□ -0.56
TRIM40-205ENST00000307859 ITPKAP23677 461 aa11.54□□□□□ -0.56
TRIM40-205ENST00000307859 PRPH2P23942 346 aa11.54□□□□□ -0.56
TRIM40-205ENST00000307859 NME5P56597 212 aa11.54□□□□□ -0.56
TRIM40-205ENST00000307859 NFE2L1Q14494 772 aa11.54□□□□□ -0.56
TRIM40-205ENST00000307859 ZNF423Q2M1K9 1284 aa11.54□□□□□ -0.56
TRIM40-205ENST00000307859 AP5B1Q2VPB7 878 aa11.54□□□□□ -0.56
TRIM40-205ENST00000307859 UNC5DQ6UXZ4 953 aa11.54□□□□□ -0.56
TRIM40-205ENST00000307859 FAM83HQ6ZRV2 1179 aaPredicted RBP11.54□□□□□ -0.56
TRIM40-205ENST00000307859 USP30Q70CQ3 517 aa11.54□□□□□ -0.56
TRIM40-205ENST00000307859 LRRTM4Q86VH4 590 aa11.54□□□□□ -0.56
TRIM40-205ENST00000307859 RETREG3Q86VR2 466 aa11.54□□□□□ -0.56
TRIM40-205ENST00000307859 THOC6Q86W42 341 aaKnown RBP11.54□□□□□ -0.56
TRIM40-205ENST00000307859 PLCD3Q8N3E9 789 aa11.54□□□□□ -0.56
TRIM40-205ENST00000307859 PCYOX1LQ8NBM8 494 aa11.54□□□□□ -0.56
TRIM40-205ENST00000307859 GANCQ8TET4 914 aa11.54□□□□□ -0.56
TRIM40-205ENST00000307859 JADE3Q92613 823 aa11.54□□□□□ -0.56
TRIM40-205ENST00000307859 STMN2Q93045 179 aa11.54□□□□□ -0.56
TRIM40-205ENST00000307859 ROPN1LQ96C74 230 aa11.54□□□□□ -0.56
TRIM40-205ENST00000307859 MSANTD3Q96H12 275 aa11.54□□□□□ -0.56
TRIM40-205ENST00000307859 CDRT15Q96T59 188 aa11.54□□□□□ -0.56
TRIM40-205ENST00000307859 C1orf50Q9BV19 199 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms