RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 RFTN2Q52LD8 501 aaPredicted RBP9.04□□□□□ -0.96
PTPRE-202ENST00000306042 TMIGD1Q6UXZ0 262 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 RANBP9Q96S59 729 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 SEPHS2Q99611 448 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 ADNPQ9H2P0 1102 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 PNPOQ9NVS9 261 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 ALKBH4Q9NXW9 302 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 DHRS7Q9Y394 339 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 TEX264Q9Y6I9 313 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 SNTNA6NMZ2 147 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 MATN2O00339 956 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 SAP18O00422 153 aaKnown RBP9.04□□□□□ -0.96
PTPRE-202ENST00000306042 LATO43561 262 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 LDB2O43679 373 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 SCN2BO60939 215 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 IFNGR2P38484 337 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 PSMD4P55036 377 aaKnown RBP9.04□□□□□ -0.96
PTPRE-202ENST00000306042 BTN3A2P78410 334 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 PRR5P85299 388 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 CSTF3Q12996 717 aaKnown RBP9.04□□□□□ -0.96
PTPRE-202ENST00000306042 LRP8Q14114 963 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 TRIP10Q15642 601 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 LRRC36Q1X8D7 754 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 SAMD4BQ5PRF9 694 aaKnown RBP9.04□□□□□ -0.96
PTPRE-202ENST00000306042 IL23RQ5VWK5 629 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 ARMC3Q5W041 872 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 ATG16L2Q8NAA4 619 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 C2CD4AQ8NCU7 369 aaPredicted RBP9.04□□□□□ -0.96
PTPRE-202ENST00000306042 ZNF563Q8TA94 476 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 RIN3Q8TB24 985 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 TM9SF4Q92544 642 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 ZNF607Q96SK3 696 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 NOL6Q9H6R4 1146 aaKnown RBP9.04□□□□□ -0.96
PTPRE-202ENST00000306042 FAM159BA6NKW6 160 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 PDE9AO76083 593 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 SEC24DO94855 1032 aaPredicted RBP9.03□□□□□ -0.96
PTPRE-202ENST00000306042 IL12BP29460 328 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 TIGD2Q4W5G0 525 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 RNF43Q68DV7 783 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 PSAPL1Q6NUJ1 521 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 TDRPQ86YL5 185 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 GATAD2AQ86YP4 633 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 SCUBE1Q8IWY4 988 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 MCEMP1Q8IX19 187 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 OR2A12Q8NGT7 310 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 CYGBQ8WWM9 190 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 JPH3Q8WXH2 748 aaPredicted RBP9.03□□□□□ -0.96
PTPRE-202ENST00000306042 RERGLQ9H628 205 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 A8MUA0 341 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 NFKB2Q00653 900 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 IRF4Q15306 451 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 NR0B2Q15466 257 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 ARHGAP12Q8IWW6 846 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 B4GALNT2Q8NHY0 566 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 NAT14Q8WUY8 206 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 XAGE5Q8WWM1 108 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 EBPLQ9BY08 206 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 DERL2Q9GZP9 239 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 KCNH6Q9H252 994 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 C1orf109Q9NX04 203 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 FETUBQ9UGM5 382 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 MUTYHQ9UIF7 546 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 HCN2Q9UL51 889 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 SLC9A8Q9Y2E8 581 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 STATHP02808 62 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 PROS1P07225 676 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 TFPIP10646 304 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 PRPS2P11908 318 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 PCSK2P16519 638 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 HRH2P25021 359 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 VSX2P58304 361 aaPredicted RBP9.03□□□□□ -0.96
PTPRE-202ENST00000306042 TOR1AIP1Q5JTV8 583 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 DHFR2Q86XF0 187 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 SPEM1Q8N4L4 309 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 CNTD1Q8N815 330 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 DNAJB14Q8TBM8 379 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 DTD2Q96FN9 168 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 GPR22Q99680 433 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 GATA5Q9BWX5 397 aaPredicted RBP9.03□□□□□ -0.96
PTPRE-202ENST00000306042 PADI2Q9Y2J8 665 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 PRKCHP24723 683 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 PTX3P26022 381 aaPredicted RBP9.03□□□□□ -0.96
PTPRE-202ENST00000306042 NRG3P56975 720 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 RAB8AP61006 207 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 RPS15P62841 145 aaKnown RBP9.03□□□□□ -0.96
PTPRE-202ENST00000306042 IRF9Q00978 393 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 NFE2L1Q14494 772 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 SF3B4Q15427 424 aaKnown RBP eCLIP9.03□□□□□ -0.96
PTPRE-202ENST00000306042 TTMPQ5BVD1 217 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 NIPAL1Q6NVV3 410 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 STX19Q8N4C7 294 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 TMEM156Q8N614 296 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 RNF148Q8N7C7 305 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 SCAIQ8N9R8 606 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 DLG3Q92796 817 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 DNAAF2Q9NVR5 837 aaKnown RBP9.03□□□□□ -0.96
PTPRE-202ENST00000306042 SNX13Q9Y5W8 968 aa9.03□□□□□ -0.96
PTPRE-202ENST00000306042 H7BY64 318 aa9.02□□□□□ -0.96
PTPRE-202ENST00000306042 AP3D1O14617 1153 aa9.02□□□□□ -0.96
PTPRE-202ENST00000306042 B4GALT2O60909 372 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms