RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 SUV39H1O43463 412 aa12.75□□□□□ -0.37
TRIM35-201ENST00000305364 C21orf33P30042 268 aaPredicted RBP12.75□□□□□ -0.37
TRIM35-201ENST00000305364 CDC42P60953 191 aa12.75□□□□□ -0.37
TRIM35-201ENST00000305364 C1DQ13901 141 aaKnown RBP12.75□□□□□ -0.37
TRIM35-201ENST00000305364 SLC34A3Q8N130 599 aa12.75□□□□□ -0.37
TRIM35-201ENST00000305364 ELMOD1Q8N336 334 aa12.75□□□□□ -0.37
TRIM35-201ENST00000305364 ZNF675Q8TD23 568 aa12.75□□□□□ -0.37
TRIM35-201ENST00000305364 IMP4Q96G21 291 aaKnown RBP12.75□□□□□ -0.37
TRIM35-201ENST00000305364 DIRAS2Q96HU8 199 aa12.75□□□□□ -0.37
TRIM35-201ENST00000305364 SH3BP4Q9P0V3 963 aa12.75□□□□□ -0.37
TRIM35-201ENST00000305364 GTF2IRD1Q9UHL9 959 aa12.75□□□□□ -0.37
TRIM35-201ENST00000305364 ZNF451Q9Y4E5 1061 aa12.75□□□□□ -0.37
TRIM35-201ENST00000305364 ARIH1Q9Y4X5 557 aaPredicted RBP12.75□□□□□ -0.37
TRIM35-201ENST00000305364 SLX4Q8IY92 1834 aa12.75□□□□□ -0.37
TRIM35-201ENST00000305364 A0A1W2PQH9 124 aa12.75□□□□□ -0.37
TRIM35-201ENST00000305364 SNX4O95219 450 aa12.75□□□□□ -0.37
TRIM35-201ENST00000305364 NDST3O95803 873 aa12.75□□□□□ -0.37
TRIM35-201ENST00000305364 ITGB1P05556 798 aa12.75□□□□□ -0.37
TRIM35-201ENST00000305364 ERVPABLB-1P60509 514 aa12.75□□□□□ -0.37
TRIM35-201ENST00000305364 RACK1P63244 317 aaKnown RBP12.75□□□□□ -0.37
TRIM35-201ENST00000305364 SPIBQ01892 262 aa12.75□□□□□ -0.37
TRIM35-201ENST00000305364 STARD3Q14849 445 aa12.75□□□□□ -0.37
TRIM35-201ENST00000305364 CDH24Q86UP0 819 aa12.75□□□□□ -0.37
TRIM35-201ENST00000305364 ARHGAP12Q8IWW6 846 aa12.75□□□□□ -0.37
TRIM35-201ENST00000305364 GLB1L3Q8NCI6 653 aaPredicted RBP12.75□□□□□ -0.37
TRIM35-201ENST00000305364 DYNC2LI1Q8TCX1 351 aa12.75□□□□□ -0.37
TRIM35-201ENST00000305364 NT5C3BQ969T7 300 aa12.75□□□□□ -0.37
TRIM35-201ENST00000305364 FUBP1Q96AE4 644 aaKnown RBP12.75□□□□□ -0.37
TRIM35-201ENST00000305364 THUMPD1Q9NXG2 353 aaKnown RBP12.75□□□□□ -0.37
TRIM35-201ENST00000305364 FKBPLQ9UIM3 349 aa12.75□□□□□ -0.37
TRIM35-201ENST00000305364 PCTPQ9UKL6 214 aa12.75□□□□□ -0.37
TRIM35-201ENST00000305364 BTAF1O14981 1849 aa12.75□□□□□ -0.37
TRIM35-201ENST00000305364 STX16O14662 325 aa12.75□□□□□ -0.37
TRIM35-201ENST00000305364 HAT1O14929 419 aa12.75□□□□□ -0.37
TRIM35-201ENST00000305364 HAPLN1P10915 354 aaPredicted RBP12.75□□□□□ -0.37
TRIM35-201ENST00000305364 FCGRTP55899 365 aa12.75□□□□□ -0.37
TRIM35-201ENST00000305364 RPS14P62263 151 aaKnown RBP12.75□□□□□ -0.37
TRIM35-201ENST00000305364 BCL2A1Q16548 175 aa12.75□□□□□ -0.37
TRIM35-201ENST00000305364 FAM214AQ32MH5 1076 aa12.75□□□□□ -0.37
TRIM35-201ENST00000305364 PM20D1Q6GTS8 502 aa12.75□□□□□ -0.37
TRIM35-201ENST00000305364 PLEKHH3Q7Z736 793 aa12.75□□□□□ -0.37
TRIM35-201ENST00000305364 C11orf74Q86VG3 221 aa12.75□□□□□ -0.37
TRIM35-201ENST00000305364 SLC44A2Q8IWA5 706 aaPredicted RBP12.75□□□□□ -0.37
TRIM35-201ENST00000305364 SNX7Q9UNH6 387 aa12.75□□□□□ -0.37
TRIM35-201ENST00000305364 F5H5T6 163 aa12.74□□□□□ -0.37
TRIM35-201ENST00000305364 TNFRSF11BO00300 401 aa12.74□□□□□ -0.37
TRIM35-201ENST00000305364 HOXA11P31270 313 aaPredicted RBP12.74□□□□□ -0.37
TRIM35-201ENST00000305364 CSNK2BP67870 215 aa12.74□□□□□ -0.37
TRIM35-201ENST00000305364 ARHGAP1Q07960 439 aa12.74□□□□□ -0.37
TRIM35-201ENST00000305364 SEMA3BQ13214 749 aa12.74□□□□□ -0.37
TRIM35-201ENST00000305364 ABRAXAS2Q15018 415 aa12.74□□□□□ -0.37
TRIM35-201ENST00000305364 TSTQ16762 297 aaKnown RBP12.74□□□□□ -0.37
TRIM35-201ENST00000305364 DGKKQ5KSL6 1271 aa12.74□□□□□ -0.37
TRIM35-201ENST00000305364 ERAP2Q6P179 960 aa12.74□□□□□ -0.37
TRIM35-201ENST00000305364 ZZZ3Q8IYH5 903 aa12.74□□□□□ -0.37
TRIM35-201ENST00000305364 CFAP52Q8N1V2 620 aa12.74□□□□□ -0.37
TRIM35-201ENST00000305364 ARRDC4Q8NCT1 418 aa12.74□□□□□ -0.37
TRIM35-201ENST00000305364 OR2T11Q8NH01 316 aa12.74□□□□□ -0.37
TRIM35-201ENST00000305364 PPTC7Q8NI37 304 aa12.74□□□□□ -0.37
TRIM35-201ENST00000305364 ADGRE3Q9BY15 652 aa12.74□□□□□ -0.37
TRIM35-201ENST00000305364 OR51E2Q9H255 320 aa12.74□□□□□ -0.37
TRIM35-201ENST00000305364 NMRK2Q9NPI5 230 aa12.74□□□□□ -0.37
TRIM35-201ENST00000305364 ARL15Q9NXU5 204 aa12.74□□□□□ -0.37
TRIM35-201ENST00000305364 N6AMT1Q9Y5N5 214 aa12.74□□□□□ -0.37
TRIM35-201ENST00000305364 HS3ST4Q9Y661 456 aa12.74□□□□□ -0.37
TRIM35-201ENST00000305364 KIAA1217Q5T5P2 1943 aa12.74□□□□□ -0.37
TRIM35-201ENST00000305364 TTC34A8MYJ7 566 aa12.74□□□□□ -0.37
TRIM35-201ENST00000305364 H3BN98 237 aa12.74□□□□□ -0.37
TRIM35-201ENST00000305364 NOS1APO75052 506 aaPredicted RBP12.74□□□□□ -0.37
TRIM35-201ENST00000305364 ERN1O75460 977 aaKnown RBP12.74□□□□□ -0.37
TRIM35-201ENST00000305364 SERPINI2O75830 405 aa12.74□□□□□ -0.37
TRIM35-201ENST00000305364 TSPAN9O75954 239 aa12.74□□□□□ -0.37
TRIM35-201ENST00000305364 ZNF7P17097 686 aaPredicted RBP12.74□□□□□ -0.37
TRIM35-201ENST00000305364 HOXB6P17509 224 aaKnown RBP12.74□□□□□ -0.37
TRIM35-201ENST00000305364 KIR3DL1P43629 444 aa12.74□□□□□ -0.37
TRIM35-201ENST00000305364 PPP2R2BQ00005 443 aa12.74□□□□□ -0.37
TRIM35-201ENST00000305364 ATAD3CQ5T2N8 411 aa12.74□□□□□ -0.37
TRIM35-201ENST00000305364 ZNF57Q68EA5 555 aaPredicted RBP12.74□□□□□ -0.37
TRIM35-201ENST00000305364 SDE2Q6IQ49 451 aa12.74□□□□□ -0.37
TRIM35-201ENST00000305364 LETMD1Q6P1Q0 360 aa12.74□□□□□ -0.37
TRIM35-201ENST00000305364 PTCHD4Q6ZW05 846 aa12.74□□□□□ -0.37
TRIM35-201ENST00000305364 GOLGA7Q7Z5G4 137 aa12.74□□□□□ -0.37
TRIM35-201ENST00000305364 MFSD4AQ8N468 514 aa12.74□□□□□ -0.37
TRIM35-201ENST00000305364 NELL1Q92832 810 aa12.74□□□□□ -0.37
TRIM35-201ENST00000305364 UBE2FQ969M7 185 aa12.74□□□□□ -0.37
TRIM35-201ENST00000305364 FBXO32Q969P5 355 aa12.74□□□□□ -0.37
TRIM35-201ENST00000305364 GFM1Q96RP9 751 aaKnown RBP12.74□□□□□ -0.37
TRIM35-201ENST00000305364 RHNO1Q9BSD3 238 aa12.74□□□□□ -0.37
TRIM35-201ENST00000305364 NUDT4Q9NZJ9 180 aa12.74□□□□□ -0.37
TRIM35-201ENST00000305364 TLL1O43897 1013 aa12.74□□□□□ -0.37
TRIM35-201ENST00000305364 STSP08842 583 aa12.74□□□□□ -0.37
TRIM35-201ENST00000305364 RHOQP17081 205 aa12.74□□□□□ -0.37
TRIM35-201ENST00000305364 ADRA1AP35348 466 aa12.74□□□□□ -0.37
TRIM35-201ENST00000305364 CAMK2GQ13555 558 aaPredicted RBP12.74□□□□□ -0.37
TRIM35-201ENST00000305364 C18orf21Q32NC0 220 aaPredicted RBP12.74□□□□□ -0.37
TRIM35-201ENST00000305364 BCL7AQ4VC05 210 aa12.74□□□□□ -0.37
TRIM35-201ENST00000305364 USP39Q53GS9 565 aaKnown RBP12.74□□□□□ -0.37
TRIM35-201ENST00000305364 TYW3Q6IPR3 259 aaKnown RBP12.74□□□□□ -0.37
TRIM35-201ENST00000305364 MSANTD2Q6P1R3 559 aa12.74□□□□□ -0.37
TRIM35-201ENST00000305364 C8orf82Q6P1X6 216 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms