RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 CCL16O15467 120 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 CORO1AP31146 461 aaKnown RBP10.2□□□□□ -0.78
CLIP1-201ENST00000302528 CRHR1P34998 444 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 PDSS1Q5T2R2 415 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 MTFR2Q6P444 385 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 SYCE2Q6PIF2 218 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 PTF1AQ7RTS3 328 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 DNAJB7Q7Z6W7 309 aaPredicted RBP10.2□□□□□ -0.78
CLIP1-201ENST00000302528 PLA2G15Q8NCC3 412 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 BPIFB1Q8TDL5 484 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 PNPLA2Q96AD5 504 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 PSKH2Q96QS6 385 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 TM9SF2Q99805 663 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 TTPALQ9BTX7 342 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 NPIPA1Q9UND3 350 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.2□□□□□ -0.78
CLIP1-201ENST00000302528 C9J4A7 227 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 ABLIM1O14639 778 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 SASH3O75995 380 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 HMGN1P05114 100 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 NR2C1P13056 603 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 HCAR3P49019 387 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 GLUD2P49448 558 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 NCBP2P52298 156 aaKnown RBP eCLIP10.19□□□□□ -0.78
CLIP1-201ENST00000302528 SELENOVP59797 346 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 LCP2Q13094 533 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 SCGB2A2Q13296 93 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 GANABQ14697 944 aaKnown RBP10.19□□□□□ -0.78
CLIP1-201ENST00000302528 AMZ1Q400G9 498 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 LIN52Q52LA3 116 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 CRB2Q5IJ48 1285 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 TNFAIP8L2Q6P589 184 aaPredicted RBP10.19□□□□□ -0.78
CLIP1-201ENST00000302528 VTCN1Q7Z7D3 282 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 PHF13Q86YI8 300 aaPredicted RBP10.19□□□□□ -0.78
CLIP1-201ENST00000302528 SLC9A9Q8IVB4 645 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 CPNE9Q8IYJ1 553 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 STYXQ8WUJ0 223 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 TSPAN18Q96SJ8 248 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 NPLQ9BXD5 320 aaPredicted RBP10.19□□□□□ -0.78
CLIP1-201ENST00000302528 MRPS17Q9Y2R5 130 aaKnown RBP10.19□□□□□ -0.78
CLIP1-201ENST00000302528 YDJCA8MPS7 323 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 C9JVG2 144 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 ACOX3O15254 700 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 ALOX15BO15296 676 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 MSI1O43347 362 aaKnown RBP10.19□□□□□ -0.78
CLIP1-201ENST00000302528 NDST3O95803 873 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 PDYNP01213 254 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 CDKN1CP49918 316 aaPredicted RBP10.19□□□□□ -0.78
CLIP1-201ENST00000302528 SLC5A3P53794 718 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 SLC1A5Q15758 541 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 TIGD6Q17RP2 521 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 CLEC12AQ5QGZ9 265 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 TMPRSS9Q7Z410 1059 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 MARCH9Q86YJ5 346 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 C12orf43Q96C57 262 aaKnown RBP10.19□□□□□ -0.78
CLIP1-201ENST00000302528 OTUB2Q96DC9 234 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 RTFDC1Q9BY42 306 aaPredicted RBP10.19□□□□□ -0.78
CLIP1-201ENST00000302528 ZNF282Q9UDV7 671 aaPredicted RBP10.19□□□□□ -0.78
CLIP1-201ENST00000302528 HEBP2Q9Y5Z4 205 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 ANKRD26Q9UPS8 1709 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 CAPN14A8MX76 684 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 H7C2Y5 167 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 NOBOXO60393 691 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 AGXTP21549 392 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 EIF1AXP47813 144 aaKnown RBP10.19□□□□□ -0.78
CLIP1-201ENST00000302528 GNG2P59768 71 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 FBXO48Q5FWF7 155 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 HAGHLQ6PII5 290 aaPredicted RBP10.19□□□□□ -0.78
CLIP1-201ENST00000302528 SLC16A9Q7RTY1 509 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 TRABD2AQ86V40 505 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 CENPSQ8N2Z9 138 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 CNTD1Q8N815 330 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 DUSP9Q99956 384 aaKnown RBP10.19□□□□□ -0.78
CLIP1-201ENST00000302528 LDAHQ9H6V9 325 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 MRPS30Q9NP92 439 aaKnown RBP10.19□□□□□ -0.78
CLIP1-201ENST00000302528 PCDHB16Q9NRJ7 776 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 PCDHGC3Q9UN70 934 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 PCDHB11Q9Y5F2 797 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 DISC1C4P0D8 188 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 CCRL2O00421 344 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 AURKAO14965 403 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 TM7SF2O76062 418 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 CFL1P23528 166 aaKnown RBP10.19□□□□□ -0.78
CLIP1-201ENST00000302528 CD83Q01151 205 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 SNTA1Q13424 505 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 OTOP3Q7RTS5 596 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 C7orf61Q8IZ16 206 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 RAB2BQ8WUD1 216 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 GATAD2BQ8WXI9 593 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 SHC3Q92529 594 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 CAMK1GQ96NX5 476 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 AGAP2Q99490 1192 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 GLIS2Q9BZE0 524 aaPredicted RBP10.19□□□□□ -0.78
CLIP1-201ENST00000302528 UNC93B1Q9H1C4 597 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 ANKHQ9HCJ1 492 aa10.19□□□□□ -0.78
CLIP1-201ENST00000302528 ENTPD6O75354 484 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 DDNO94850 711 aaPredicted RBP10.18□□□□□ -0.78
CLIP1-201ENST00000302528 NUDT17P0C025 328 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 MERTKQ12866 999 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 TAF10Q12962 218 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms