RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 USP39Q53GS9 565 aaKnown RBP12.59□□□□□ -0.39
HIF3A-204ENST00000300862 ANKRD26P1Q6NSI1 321 aa12.59□□□□□ -0.39
HIF3A-204ENST00000300862 PRR23BQ6ZRT6 265 aa12.59□□□□□ -0.39
HIF3A-204ENST00000300862 VRK3Q8IV63 474 aa12.59□□□□□ -0.39
HIF3A-204ENST00000300862 HS6ST3Q8IZP7 471 aa12.59□□□□□ -0.39
HIF3A-204ENST00000300862 CMTM8Q8IZV2 173 aa12.59□□□□□ -0.39
HIF3A-204ENST00000300862 NETO1Q8TDF5 533 aa12.59□□□□□ -0.39
HIF3A-204ENST00000300862 SELENOMQ8WWX9 145 aa12.59□□□□□ -0.39
HIF3A-204ENST00000300862 FBXL8Q96CD0 374 aa12.59□□□□□ -0.39
HIF3A-204ENST00000300862 TMEM169Q96HH4 297 aa12.59□□□□□ -0.39
HIF3A-204ENST00000300862 SLX1AQ9BQ83 275 aa12.59□□□□□ -0.39
HIF3A-204ENST00000300862 NTMT1Q9BV86 223 aa12.59□□□□□ -0.39
HIF3A-204ENST00000300862 UGT2B28Q9BY64 529 aa12.59□□□□□ -0.39
HIF3A-204ENST00000300862 AMBRA1Q9C0C7 1298 aa12.59□□□□□ -0.39
HIF3A-204ENST00000300862 GORASP2Q9H8Y8 452 aa12.59□□□□□ -0.39
HIF3A-204ENST00000300862 PARVBQ9HBI1 364 aa12.59□□□□□ -0.39
HIF3A-204ENST00000300862 PCDHGA8Q9Y5G5 932 aa12.59□□□□□ -0.39
HIF3A-204ENST00000300862 CORINQ9Y5Q5 1042 aa12.59□□□□□ -0.39
HIF3A-204ENST00000300862 H0YAE9 185 aa12.58□□□□□ -0.4
HIF3A-204ENST00000300862 IFRD1O00458 451 aaPredicted RBP12.58□□□□□ -0.4
HIF3A-204ENST00000300862 PITPNM1O00562 1244 aa12.58□□□□□ -0.4
HIF3A-204ENST00000300862 CLDN9O95484 217 aa12.58□□□□□ -0.4
HIF3A-204ENST00000300862 IL6P05231 212 aa12.58□□□□□ -0.4
HIF3A-204ENST00000300862 MSH3P20585 1137 aa12.58□□□□□ -0.4
HIF3A-204ENST00000300862 RXRGP48443 463 aa12.58□□□□□ -0.4
HIF3A-204ENST00000300862 BMXP51813 675 aa12.58□□□□□ -0.4
HIF3A-204ENST00000300862 PON2Q15165 354 aa12.58□□□□□ -0.4
HIF3A-204ENST00000300862 MEP1AQ16819 746 aa12.58□□□□□ -0.4
HIF3A-204ENST00000300862 RUNDC3AQ59EK9 446 aa12.58□□□□□ -0.4
HIF3A-204ENST00000300862 TPGS2Q68CL5 300 aa12.58□□□□□ -0.4
HIF3A-204ENST00000300862 GRAMD4Q6IC98 578 aa12.58□□□□□ -0.4
HIF3A-204ENST00000300862 GAREM2Q75VX8 874 aa12.58□□□□□ -0.4
HIF3A-204ENST00000300862 R3HCC1LQ7Z5L2 792 aaKnown RBP12.58□□□□□ -0.4
HIF3A-204ENST00000300862 DDHD1Q8NEL9 900 aa12.58□□□□□ -0.4
HIF3A-204ENST00000300862 BPIFB6Q8NFQ5 453 aa12.58□□□□□ -0.4
HIF3A-204ENST00000300862 FRS2Q8WU20 508 aa12.58□□□□□ -0.4
HIF3A-204ENST00000300862 VOPP1Q96AW1 172 aa12.58□□□□□ -0.4
HIF3A-204ENST00000300862 ITCHQ96J02 903 aa12.58□□□□□ -0.4
HIF3A-204ENST00000300862 NEURL2Q9BR09 285 aa12.58□□□□□ -0.4
HIF3A-204ENST00000300862 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.58□□□□□ -0.4
HIF3A-204ENST00000300862 IGSF6O95976 241 aa12.58□□□□□ -0.4
HIF3A-204ENST00000300862 SERPINA1P01009 418 aa12.58□□□□□ -0.4
HIF3A-204ENST00000300862 ANXA5P08758 320 aa12.58□□□□□ -0.4
HIF3A-204ENST00000300862 ITPKAP23677 461 aa12.58□□□□□ -0.4
HIF3A-204ENST00000300862 SERPINA4P29622 427 aa12.58□□□□□ -0.4
HIF3A-204ENST00000300862 TPD52P55327 224 aaPredicted RBP12.58□□□□□ -0.4
HIF3A-204ENST00000300862 RAB15P59190 212 aa12.58□□□□□ -0.4
HIF3A-204ENST00000300862 PTSQ03393 145 aa12.58□□□□□ -0.4
HIF3A-204ENST00000300862 BOP1Q14137 746 aaKnown RBP12.58□□□□□ -0.4
HIF3A-204ENST00000300862 PLEKHG6Q3KR16 790 aa12.58□□□□□ -0.4
HIF3A-204ENST00000300862 SERPINA13PQ6UXR4 307 aa12.58□□□□□ -0.4
HIF3A-204ENST00000300862 UBE2R2Q712K3 238 aaPredicted RBP12.58□□□□□ -0.4
HIF3A-204ENST00000300862 GALNT10Q86SR1 603 aa12.58□□□□□ -0.4
HIF3A-204ENST00000300862 OR2AP1Q8NGE2 309 aa12.58□□□□□ -0.4
HIF3A-204ENST00000300862 USP7Q93009 1102 aa12.58□□□□□ -0.4
HIF3A-204ENST00000300862 ACDQ96AP0 544 aa12.58□□□□□ -0.4
HIF3A-204ENST00000300862 SDCCAG3Q96C92 435 aa12.58□□□□□ -0.4
HIF3A-204ENST00000300862 CCDC115Q96NT0 180 aa12.58□□□□□ -0.4
HIF3A-204ENST00000300862 MBOAT4Q96T53 435 aa12.58□□□□□ -0.4
HIF3A-204ENST00000300862 COPS8Q99627 209 aa12.58□□□□□ -0.4
HIF3A-204ENST00000300862 KAT8Q9H7Z6 458 aaKnown RBP12.58□□□□□ -0.4
HIF3A-204ENST00000300862 ABCB8Q9NUT2 735 aa12.58□□□□□ -0.4
HIF3A-204ENST00000300862 FAM118AQ9NWS6 357 aa12.58□□□□□ -0.4
HIF3A-204ENST00000300862 GPRC5BQ9NZH0 403 aa12.58□□□□□ -0.4
HIF3A-204ENST00000300862 DNAJB9Q9UBS3 223 aa12.58□□□□□ -0.4
HIF3A-204ENST00000300862 TRPS1Q9UHF7 1281 aa12.58□□□□□ -0.4
HIF3A-204ENST00000300862 TRIM43BA6NCK2 446 aa12.57□□□□□ -0.4
HIF3A-204ENST00000300862 HS6ST1O60243 411 aa12.57□□□□□ -0.4
HIF3A-204ENST00000300862 E2F6O75461 281 aa12.57□□□□□ -0.4
HIF3A-204ENST00000300862 CREG1O75629 220 aa12.57□□□□□ -0.4
HIF3A-204ENST00000300862 WDR47O94967 919 aa12.57□□□□□ -0.4
HIF3A-204ENST00000300862 ZNF182P17025 639 aaPredicted RBP12.57□□□□□ -0.4
HIF3A-204ENST00000300862 AGXTP21549 392 aa12.57□□□□□ -0.4
HIF3A-204ENST00000300862 NR4A1P22736 598 aa12.57□□□□□ -0.4
HIF3A-204ENST00000300862 HALP42357 657 aa12.57□□□□□ -0.4
HIF3A-204ENST00000300862 RPS14P62263 151 aaKnown RBP12.57□□□□□ -0.4
HIF3A-204ENST00000300862 KCNC4Q03721 635 aa12.57□□□□□ -0.4
HIF3A-204ENST00000300862 MAD2L1Q13257 205 aaPredicted RBP12.57□□□□□ -0.4
HIF3A-204ENST00000300862 SLC14A1Q13336 389 aa12.57□□□□□ -0.4
HIF3A-204ENST00000300862 TTLL9Q3SXZ7 439 aa12.57□□□□□ -0.4
HIF3A-204ENST00000300862 RBM23Q86U06 439 aaKnown RBP12.57□□□□□ -0.4
HIF3A-204ENST00000300862 MICU2Q8IYU8 434 aa12.57□□□□□ -0.4
HIF3A-204ENST00000300862 PXYLP1Q8TE99 480 aa12.57□□□□□ -0.4
HIF3A-204ENST00000300862 CHPT1Q8WUD6 406 aa12.57□□□□□ -0.4
HIF3A-204ENST00000300862 APIPQ96GX9 242 aa12.57□□□□□ -0.4
HIF3A-204ENST00000300862 EBPLQ9BY08 206 aa12.57□□□□□ -0.4
HIF3A-204ENST00000300862 ATG10Q9H0Y0 220 aa12.57□□□□□ -0.4
HIF3A-204ENST00000300862 ZDHHC6Q9H6R6 413 aa12.57□□□□□ -0.4
HIF3A-204ENST00000300862 SERHLQ9NQF3 203 aa12.57□□□□□ -0.4
HIF3A-204ENST00000300862 CREBZFQ9NS37 354 aa12.57□□□□□ -0.4
HIF3A-204ENST00000300862 KCTD5Q9NXV2 234 aa12.57□□□□□ -0.4
HIF3A-204ENST00000300862 PPT2Q9UMR5 302 aa12.57□□□□□ -0.4
HIF3A-204ENST00000300862 SOBPA7XYQ1 873 aa12.57□□□□□ -0.4
HIF3A-204ENST00000300862 PRAMEF4O60810 478 aa12.57□□□□□ -0.4
HIF3A-204ENST00000300862 KRT6AP02538 564 aa12.57□□□□□ -0.4
HIF3A-204ENST00000300862 KRT6BP04259 564 aa12.57□□□□□ -0.4
HIF3A-204ENST00000300862 UGT2B4P06133 528 aa12.57□□□□□ -0.4
HIF3A-204ENST00000300862 EFNA1P20827 205 aaPredicted RBP12.57□□□□□ -0.4
HIF3A-204ENST00000300862 S100A3P33764 101 aa12.57□□□□□ -0.4
HIF3A-204ENST00000300862 NSG1P42857 185 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms