RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 BTN3A2P78410 334 aa13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 SLBPQ14493 270 aaKnown RBP eCLIP13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 TYSND1Q2T9J0 566 aa13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 MFSD5Q6N075 450 aa13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 HAVCR1Q96D42 359 aa13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 CCDC120Q96HB5 630 aa13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 MCCC1Q96RQ3 725 aaPredicted RBP13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 IL4I1Q96RQ9 567 aa13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 CARS2Q9HA77 564 aaKnown RBP13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 CXorf21Q9HAI6 301 aa13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 PNPLA8Q9NP80 782 aa13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 LYPLA2O95372 231 aa13.3□□□□□ -0.28
CHRFAM7A-201ENST00000299847 CFIP05156 583 aa13.3□□□□□ -0.28
CHRFAM7A-201ENST00000299847 C8GP07360 202 aa13.3□□□□□ -0.28
CHRFAM7A-201ENST00000299847 SIRPB2Q5JXA9 342 aa13.3□□□□□ -0.28
CHRFAM7A-201ENST00000299847 KREMEN2Q8NCW0 462 aa13.3□□□□□ -0.28
CHRFAM7A-201ENST00000299847 ZNF516Q92618 1163 aa13.3□□□□□ -0.28
CHRFAM7A-201ENST00000299847 TSPAN4O14817 238 aa13.3□□□□□ -0.28
CHRFAM7A-201ENST00000299847 TMEM63AO94886 807 aa13.3□□□□□ -0.28
CHRFAM7A-201ENST00000299847 IL1R2P27930 398 aa13.3□□□□□ -0.28
CHRFAM7A-201ENST00000299847 FOXN2P32314 431 aa13.3□□□□□ -0.28
CHRFAM7A-201ENST00000299847 MLLT3P42568 568 aaPredicted RBP13.3□□□□□ -0.28
CHRFAM7A-201ENST00000299847 DGKQP52824 942 aa13.3□□□□□ -0.28
CHRFAM7A-201ENST00000299847 MLLT10P55197 1068 aa13.3□□□□□ -0.28
CHRFAM7A-201ENST00000299847 TXNRD3NBQ6F5E7 133 aa13.3□□□□□ -0.28
CHRFAM7A-201ENST00000299847 PRR23BQ6ZRT6 265 aa13.3□□□□□ -0.28
CHRFAM7A-201ENST00000299847 Q8N9G6 341 aaPredicted RBP13.3□□□□□ -0.28
CHRFAM7A-201ENST00000299847 BANPQ8N9N5 519 aa13.3□□□□□ -0.28
CHRFAM7A-201ENST00000299847 SPATA9Q9BWV2 254 aa13.3□□□□□ -0.28
CHRFAM7A-201ENST00000299847 CNTN6Q9UQ52 1028 aa13.3□□□□□ -0.28
CHRFAM7A-201ENST00000299847 C5orf51A6NDU8 294 aa13.3□□□□□ -0.28
CHRFAM7A-201ENST00000299847 EI24O14681 340 aa13.3□□□□□ -0.28
CHRFAM7A-201ENST00000299847 ADAMDEC1O15204 470 aa13.3□□□□□ -0.28
CHRFAM7A-201ENST00000299847 TBX1O43435 398 aa13.3□□□□□ -0.28
CHRFAM7A-201ENST00000299847 ACVRL1P37023 503 aa13.3□□□□□ -0.28
CHRFAM7A-201ENST00000299847 CLCN4P51793 760 aa13.3□□□□□ -0.28
CHRFAM7A-201ENST00000299847 ARF3P61204 181 aaPredicted RBP13.3□□□□□ -0.28
CHRFAM7A-201ENST00000299847 ARF1P84077 181 aaKnown RBP13.3□□□□□ -0.28
CHRFAM7A-201ENST00000299847 CERS6Q6ZMG9 384 aa13.3□□□□□ -0.28
CHRFAM7A-201ENST00000299847 CCDC54Q8NEL0 328 aa13.3□□□□□ -0.28
CHRFAM7A-201ENST00000299847 MYOCOSA0A1B0GUC4 107 aa13.3□□□□□ -0.28
CHRFAM7A-201ENST00000299847 A0A1B0GVT2 93 aa13.3□□□□□ -0.28
CHRFAM7A-201ENST00000299847 BCHEP06276 602 aa13.3□□□□□ -0.28
CHRFAM7A-201ENST00000299847 CCKBRP32239 447 aa13.3□□□□□ -0.28
CHRFAM7A-201ENST00000299847 ACSL1P33121 698 aa13.3□□□□□ -0.28
CHRFAM7A-201ENST00000299847 GRSF1Q12849 480 aaKnown RBP eCLIP13.3□□□□□ -0.28
CHRFAM7A-201ENST00000299847 HEPACAMQ14CZ8 416 aa13.3□□□□□ -0.28
CHRFAM7A-201ENST00000299847 TMEM145Q8NBT3 493 aa13.3□□□□□ -0.28
CHRFAM7A-201ENST00000299847 NKD2Q969F2 451 aaPredicted RBP13.3□□□□□ -0.28
CHRFAM7A-201ENST00000299847 PKP4Q99569 1192 aa13.3□□□□□ -0.28
CHRFAM7A-201ENST00000299847 CENPMQ9NSP4 180 aa13.3□□□□□ -0.28
CHRFAM7A-201ENST00000299847 FZD4Q9ULV1 537 aa13.3□□□□□ -0.28
CHRFAM7A-201ENST00000299847 IGLV3-22A0A075B6J6 115 aa13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 CARNS1A5YM72 827 aa13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 GRXCR1A8MXD5 290 aa13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 EFCAB9A8MZ26 197 aa13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 SCELO95171 688 aa13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 GDI2P50395 445 aaKnown RBP13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 SLC2A7Q6PXP3 512 aa13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 METTL27Q8N6F8 245 aaPredicted RBP13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 DHX33Q9H6R0 707 aaKnown RBP13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 MCCC2Q9HCC0 563 aa13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 GRHL1Q9NZI5 618 aa13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 POMPQ9Y244 141 aa13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 TMEM98Q9Y2Y6 226 aa13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 A0A1W2PRB8 838 aa13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 TULP2O00295 520 aa13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 KERAO60938 352 aa13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 ECI2O75521 394 aa13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 RPLP0P05388 317 aaKnown RBP13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 GAD2Q05329 585 aa13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 LAPTM4AQ15012 233 aa13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 TXNDC8Q6A555 127 aa13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 OR4F3Q6IEY1 312 aa13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 RASGRP3Q8IV61 690 aa13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 PARPBPQ9NWS1 579 aa13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 SPIN1Q9Y657 262 aaPredicted RBP13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 SRRM3A6NNA2 597 aaPredicted RBP13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 LINGO3P0C6S8 592 aa13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 ENGP17813 658 aa13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 ECHS1P30084 290 aa13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 CARD16Q5EG05 197 aa13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 NUP54Q7Z3B4 507 aa13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 AMIGO1Q86WK6 493 aa13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 RFKQ969G6 155 aa13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 TSPAN18Q96SJ8 248 aa13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 ZNF99A8MXY4 864 aaPredicted RBP13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 PTGER3P43115 390 aa13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 CDH15P55291 814 aa13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 LIN52Q52LA3 116 aa13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 AMZ2Q86W34 360 aa13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 DBF4BQ8NFT6 615 aa13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 ADGRB1O14514 1584 aa13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 CDC7O00311 574 aa13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 SYN3O14994 580 aa13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 EDNRAP25101 427 aa13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 GDF5P43026 501 aa13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 XKP51811 444 aa13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 NUDT6P53370 316 aa13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 SGCBQ16585 318 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms