RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 GGTA1PQ4G0N0 100 aa15.13■□□□□ 0.01
LSM6-201ENST00000296581 PTCRAQ6ISU1 281 aaPredicted RBP15.13■□□□□ 0.01
LSM6-201ENST00000296581 Q6ZSR9 355 aa15.13■□□□□ 0.01
LSM6-201ENST00000296581 SPATA19Q7Z5L4 167 aa15.13■□□□□ 0.01
LSM6-201ENST00000296581 FAM13CQ8NE31 585 aa15.13■□□□□ 0.01
LSM6-201ENST00000296581 MCUR1Q96AQ8 359 aa15.13■□□□□ 0.01
LSM6-201ENST00000296581 NKX1-2Q9UD57 310 aaPredicted RBP15.13■□□□□ 0.01
LSM6-201ENST00000296581 SLC23A2Q9UGH3 650 aa15.13■□□□□ 0.01
LSM6-201ENST00000296581 RNF11Q9Y3C5 154 aa15.13■□□□□ 0.01
LSM6-201ENST00000296581 PRKAB1Q9Y478 270 aa15.13■□□□□ 0.01
LSM6-201ENST00000296581 KMOO15229 486 aa15.12■□□□□ 0.01
LSM6-201ENST00000296581 CLDN9O95484 217 aa15.12■□□□□ 0.01
LSM6-201ENST00000296581 MRPL19P49406 292 aaKnown RBP15.12■□□□□ 0.01
LSM6-201ENST00000296581 FASTKQ14296 549 aaKnown RBP15.12■□□□□ 0.01
LSM6-201ENST00000296581 ZRSR2Q15696 482 aaKnown RBP15.12■□□□□ 0.01
LSM6-201ENST00000296581 AGTRAPQ6RW13 159 aa15.12■□□□□ 0.01
LSM6-201ENST00000296581 IL27RAQ6UWB1 636 aa15.12■□□□□ 0.01
LSM6-201ENST00000296581 SCIMPQ6UWF3 145 aa15.12■□□□□ 0.01
LSM6-201ENST00000296581 UNC5DQ6UXZ4 953 aa15.12■□□□□ 0.01
LSM6-201ENST00000296581 FAM124AQ86V42 546 aa15.12■□□□□ 0.01
LSM6-201ENST00000296581 SNX31Q8N9S9 440 aa15.12■□□□□ 0.01
LSM6-201ENST00000296581 PYCR2Q96C36 320 aa15.12■□□□□ 0.01
LSM6-201ENST00000296581 ATG10Q9H0Y0 220 aa15.12■□□□□ 0.01
LSM6-201ENST00000296581 NDRG2Q9UN36 371 aaKnown RBP15.12■□□□□ 0.01
LSM6-201ENST00000296581 SLC22A14Q9Y267 594 aa15.12■□□□□ 0.01
LSM6-201ENST00000296581 GMEB1Q9Y692 573 aa15.12■□□□□ 0.01
LSM6-201ENST00000296581 GPX3P22352 226 aa15.12■□□□□ 0.01
LSM6-201ENST00000296581 IMPA1P29218 277 aa15.12■□□□□ 0.01
LSM6-201ENST00000296581 PGM1P36871 562 aa15.12■□□□□ 0.01
LSM6-201ENST00000296581 TPMTP51580 245 aa15.12■□□□□ 0.01
LSM6-201ENST00000296581 SLC25A3Q00325 362 aa15.12■□□□□ 0.01
LSM6-201ENST00000296581 ABRAXAS2Q15018 415 aa15.12■□□□□ 0.01
LSM6-201ENST00000296581 MAPRE2Q15555 327 aa15.12■□□□□ 0.01
LSM6-201ENST00000296581 GSTA3Q16772 222 aa15.12■□□□□ 0.01
LSM6-201ENST00000296581 PDZD3Q86UT5 571 aa15.12■□□□□ 0.01
LSM6-201ENST00000296581 TRIM69Q86WT6 500 aa15.12■□□□□ 0.01
LSM6-201ENST00000296581 ZNF687Q8N1G0 1237 aa15.12■□□□□ 0.01
LSM6-201ENST00000296581 ARHGAP24Q8N264 748 aa15.12■□□□□ 0.01
LSM6-201ENST00000296581 L3MBTL4Q8NA19 623 aa15.12■□□□□ 0.01
LSM6-201ENST00000296581 OR56A3Q8NH54 315 aa15.12■□□□□ 0.01
LSM6-201ENST00000296581 ZDHHC5Q9C0B5 715 aa15.12■□□□□ 0.01
LSM6-201ENST00000296581 ACTR8Q9H981 624 aa15.12■□□□□ 0.01
LSM6-201ENST00000296581 CD93Q9NPY3 652 aa15.12■□□□□ 0.01
LSM6-201ENST00000296581 DUSP12Q9UNI6 340 aa15.12■□□□□ 0.01
LSM6-201ENST00000296581 SLC17A4Q9Y2C5 497 aa15.12■□□□□ 0.01
LSM6-201ENST00000296581 CCL27Q9Y4X3 112 aa15.12■□□□□ 0.01
LSM6-201ENST00000296581 KCNE1BA0A087WTH5 132 aa15.11■□□□□ 0.01
LSM6-201ENST00000296581 C10orf142B7Z368 130 aa15.11■□□□□ 0.01
LSM6-201ENST00000296581 PEX11AO75192 247 aa15.11■□□□□ 0.01
LSM6-201ENST00000296581 CHRNB1P11230 501 aa15.11■□□□□ 0.01
LSM6-201ENST00000296581 FOSL2P15408 326 aa15.11■□□□□ 0.01
LSM6-201ENST00000296581 ITGAXP20702 1163 aa15.11■□□□□ 0.01
LSM6-201ENST00000296581 MAT2AP31153 395 aaKnown RBP15.11■□□□□ 0.01
LSM6-201ENST00000296581 STX1BP61266 288 aa15.11■□□□□ 0.01
LSM6-201ENST00000296581 DMPKQ09013 629 aa15.11■□□□□ 0.01
LSM6-201ENST00000296581 C6orf136Q5SQH8 315 aa15.11■□□□□ 0.01
LSM6-201ENST00000296581 METRNLQ641Q3 311 aa15.11■□□□□ 0.01
LSM6-201ENST00000296581 DENND6BQ8NEG7 585 aa15.11■□□□□ 0.01
LSM6-201ENST00000296581 USP7Q93009 1102 aa15.11■□□□□ 0.01
LSM6-201ENST00000296581 MAGEB10Q96LZ2 347 aaPredicted RBP15.11■□□□□ 0.01
LSM6-201ENST00000296581 APOOQ9BUR5 198 aa15.11■□□□□ 0.01
LSM6-201ENST00000296581 SDR39U1Q9NRG7 319 aaPredicted RBP15.11■□□□□ 0.01
LSM6-201ENST00000296581 EYSQ5T1H1 3165 aa15.11■□□□□ 0.01
LSM6-201ENST00000296581 MANBAO00462 879 aa15.1■□□□□ 0.01
LSM6-201ENST00000296581 SLC16A8O95907 504 aa15.1■□□□□ 0.01
LSM6-201ENST00000296581 FUCA1P04066 466 aa15.1■□□□□ 0.01
LSM6-201ENST00000296581 CEACAM5P06731 702 aa15.1■□□□□ 0.01
LSM6-201ENST00000296581 HOXC4P09017 264 aaPredicted RBP15.1■□□□□ 0.01
LSM6-201ENST00000296581 IDO1P14902 403 aa15.1■□□□□ 0.01
LSM6-201ENST00000296581 ITPKAP23677 461 aa15.1■□□□□ 0.01
LSM6-201ENST00000296581 ACSL1P33121 698 aa15.1■□□□□ 0.01
LSM6-201ENST00000296581 RAP1GDS1P52306 607 aa15.1■□□□□ 0.01
LSM6-201ENST00000296581 ERVK-8P63133 956 aa15.1■□□□□ 0.01
LSM6-201ENST00000296581 PCDH1Q08174 1060 aa15.1■□□□□ 0.01
LSM6-201ENST00000296581 GRIK2Q13002 908 aa15.1■□□□□ 0.01
LSM6-201ENST00000296581 AGKQ53H12 422 aa15.1■□□□□ 0.01
LSM6-201ENST00000296581 IRGCQ6NXR0 463 aa15.1■□□□□ 0.01
LSM6-201ENST00000296581 ZNF852Q6ZMS4 543 aa15.1■□□□□ 0.01
LSM6-201ENST00000296581 Q6ZS52 159 aa15.1■□□□□ 0.01
LSM6-201ENST00000296581 GK5Q6ZS86 529 aa15.1■□□□□ 0.01
LSM6-201ENST00000296581 Q7L0L9 218 aa15.1■□□□□ 0.01
LSM6-201ENST00000296581 TRIM46Q7Z4K8 759 aa15.1■□□□□ 0.01
LSM6-201ENST00000296581 THOC6Q86W42 341 aaKnown RBP15.1■□□□□ 0.01
LSM6-201ENST00000296581 SFRP1Q8N474 314 aa15.1■□□□□ 0.01
LSM6-201ENST00000296581 OR2T34Q8NGX1 318 aa15.1■□□□□ 0.01
LSM6-201ENST00000296581 RNPEPL1Q9HAU8 725 aa15.1■□□□□ 0.01
LSM6-201ENST00000296581 ITM2CQ9NQX7 267 aa15.1■□□□□ 0.01
LSM6-201ENST00000296581 TM7SF3Q9NS93 570 aa15.1■□□□□ 0.01
LSM6-201ENST00000296581 INTS7Q9NVH2 962 aaKnown RBP15.1■□□□□ 0.01
LSM6-201ENST00000296581 AIG1Q9NVV5 245 aa15.1■□□□□ 0.01
LSM6-201ENST00000296581 USP36Q9P275 1121 aaKnown RBP15.1■□□□□ 0.01
LSM6-201ENST00000296581 KLQ9UEF7 1012 aa15.1■□□□□ 0.01
LSM6-201ENST00000296581 GPR45Q9Y5Y3 372 aa15.1■□□□□ 0.01
LSM6-201ENST00000296581 CHURC1-FNTBB4DL54 471 aa15.1■□□□□ 0.01
LSM6-201ENST00000296581 SLC31A1O15431 190 aa15.1■□□□□ 0.01
LSM6-201ENST00000296581 PRAMEF4O60810 478 aa15.1■□□□□ 0.01
LSM6-201ENST00000296581 MLLT1Q03111 559 aaPredicted RBP15.1■□□□□ 0.01
LSM6-201ENST00000296581 NAE1Q13564 534 aa15.1■□□□□ 0.01
LSM6-201ENST00000296581 ATP6AP1LQ52LC2 224 aa15.1■□□□□ 0.01
LSM6-201ENST00000296581 PRAMEF9Q5VWM5 478 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms