RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 VPS4AQ9UN37 437 aa11.47□□□□□ -0.57
RHO-201ENST00000296271 KCNE1BA0A087WTH5 132 aa11.47□□□□□ -0.57
RHO-201ENST00000296271 WASH3PC4AMC7 463 aa11.47□□□□□ -0.57
RHO-201ENST00000296271 NOBOXO60393 691 aa11.47□□□□□ -0.57
RHO-201ENST00000296271 GPIP06744 558 aa11.47□□□□□ -0.57
RHO-201ENST00000296271 SYN1P17600 705 aa11.47□□□□□ -0.57
RHO-201ENST00000296271 PRKACGP22612 351 aa11.47□□□□□ -0.57
RHO-201ENST00000296271 HALP42357 657 aa11.47□□□□□ -0.57
RHO-201ENST00000296271 PFN3P60673 137 aa11.47□□□□□ -0.57
RHO-201ENST00000296271 LAPTM4AQ15012 233 aa11.47□□□□□ -0.57
RHO-201ENST00000296271 CYBRD1Q53TN4 286 aa11.47□□□□□ -0.57
RHO-201ENST00000296271 C1orf53Q5VUE5 145 aa11.47□□□□□ -0.57
RHO-201ENST00000296271 LYPLAL1Q5VWZ2 237 aa11.47□□□□□ -0.57
RHO-201ENST00000296271 SPRED1Q7Z699 444 aa11.47□□□□□ -0.57
RHO-201ENST00000296271 RASGEF1AQ8N9B8 481 aa11.47□□□□□ -0.57
RHO-201ENST00000296271 OR2T12Q8NG77 320 aa11.47□□□□□ -0.57
RHO-201ENST00000296271 UBTD2Q8WUN7 234 aa11.47□□□□□ -0.57
RHO-201ENST00000296271 RMND5BQ96G75 393 aaPredicted RBP11.47□□□□□ -0.57
RHO-201ENST00000296271 SAMD11Q96NU1 681 aa11.47□□□□□ -0.57
RHO-201ENST00000296271 SLC12A9Q9BXP2 914 aa11.47□□□□□ -0.57
RHO-201ENST00000296271 CLMPQ9H6B4 373 aa11.47□□□□□ -0.57
RHO-201ENST00000296271 C11orf49Q9H6J7 331 aa11.47□□□□□ -0.57
RHO-201ENST00000296271 SMURF2Q9HAU4 748 aa11.47□□□□□ -0.57
RHO-201ENST00000296271 RDH14Q9HBH5 336 aa11.47□□□□□ -0.57
RHO-201ENST00000296271 SERHLQ9NQF3 203 aa11.47□□□□□ -0.57
RHO-201ENST00000296271 PFDN4Q9NQP4 134 aa11.47□□□□□ -0.57
RHO-201ENST00000296271 LIMD1Q9UGP4 676 aa11.47□□□□□ -0.57
RHO-201ENST00000296271 TRPS1Q9UHF7 1281 aa11.47□□□□□ -0.57
RHO-201ENST00000296271 PCDHB3Q9Y5E6 796 aa11.47□□□□□ -0.57
RHO-201ENST00000296271 TCF20Q9UGU0 1960 aaKnown RBP11.47□□□□□ -0.57
RHO-201ENST00000296271 ARHGEF33A8MVX0 844 aa11.46□□□□□ -0.57
RHO-201ENST00000296271 SLC28A1O00337 649 aa11.46□□□□□ -0.57
RHO-201ENST00000296271 YY2O15391 372 aa11.46□□□□□ -0.57
RHO-201ENST00000296271 RASAL1O95294 804 aa11.46□□□□□ -0.57
RHO-201ENST00000296271 SDC1P18827 310 aa11.46□□□□□ -0.57
RHO-201ENST00000296271 GGT1P19440 569 aa11.46□□□□□ -0.57
RHO-201ENST00000296271 CTBSQ01459 385 aa11.46□□□□□ -0.57
RHO-201ENST00000296271 CHIT1Q13231 466 aa11.46□□□□□ -0.57
RHO-201ENST00000296271 C16orf72Q14CZ0 275 aa11.46□□□□□ -0.57
RHO-201ENST00000296271 ZNF77Q15935 545 aa11.46□□□□□ -0.57
RHO-201ENST00000296271 INTS11Q5TA45 600 aaKnown RBP11.46□□□□□ -0.57
RHO-201ENST00000296271 OR4F3Q6IEY1 312 aa11.46□□□□□ -0.57
RHO-201ENST00000296271 TRIML2Q8N7C3 387 aa11.46□□□□□ -0.57
RHO-201ENST00000296271 ZNF548Q8NEK5 533 aaPredicted RBP11.46□□□□□ -0.57
RHO-201ENST00000296271 OR7A2PQ8NGA2 310 aa11.46□□□□□ -0.57
RHO-201ENST00000296271 PNPT1Q8TCS8 783 aaKnown RBP11.46□□□□□ -0.57
RHO-201ENST00000296271 BPIFB1Q8TDL5 484 aa11.46□□□□□ -0.57
RHO-201ENST00000296271 NCSTNQ92542 709 aa11.46□□□□□ -0.57
RHO-201ENST00000296271 BADQ92934 168 aa11.46□□□□□ -0.57
RHO-201ENST00000296271 TMBIM1Q969X1 311 aa11.46□□□□□ -0.57
RHO-201ENST00000296271 NXPE3Q969Y0 559 aa11.46□□□□□ -0.57
RHO-201ENST00000296271 ELOVL6Q9H5J4 265 aa11.46□□□□□ -0.57
RHO-201ENST00000296271 ADGRE2Q9UHX3 823 aa11.46□□□□□ -0.57
RHO-201ENST00000296271 U3KQV3 271 aa11.46□□□□□ -0.57
RHO-201ENST00000296271 DOCK9Q9BZ29 2069 aa11.46□□□□□ -0.57
RHO-201ENST00000296271 E7EQ34 232 aa11.46□□□□□ -0.58
RHO-201ENST00000296271 PRKD3O94806 890 aa11.46□□□□□ -0.58
RHO-201ENST00000296271 ETHE1O95571 254 aa11.46□□□□□ -0.58
RHO-201ENST00000296271 LDLRP01130 860 aa11.46□□□□□ -0.58
RHO-201ENST00000296271 SLC5A2P31639 672 aa11.46□□□□□ -0.58
RHO-201ENST00000296271 SLC6A12P48065 614 aa11.46□□□□□ -0.58
RHO-201ENST00000296271 NAA20P61599 178 aa11.46□□□□□ -0.58
RHO-201ENST00000296271 RPS14P62263 151 aaKnown RBP11.46□□□□□ -0.58
RHO-201ENST00000296271 GBX1Q14549 363 aa11.46□□□□□ -0.58
RHO-201ENST00000296271 SLC36A3Q495N2 470 aa11.46□□□□□ -0.58
RHO-201ENST00000296271 TMEM179BQ7Z7N9 219 aa11.46□□□□□ -0.58
RHO-201ENST00000296271 CACUL1Q86Y37 369 aa11.46□□□□□ -0.58
RHO-201ENST00000296271 NETO1Q8TDF5 533 aa11.46□□□□□ -0.58
RHO-201ENST00000296271 DGCR14Q96DF8 476 aaKnown RBP11.46□□□□□ -0.58
RHO-201ENST00000296271 MED8Q96G25 268 aa11.46□□□□□ -0.58
RHO-201ENST00000296271 HEPHQ9BQS7 1158 aa11.46□□□□□ -0.58
RHO-201ENST00000296271 PAIP1Q9H074 479 aaKnown RBP11.46□□□□□ -0.58
RHO-201ENST00000296271 GULP1Q9UBP9 304 aa11.46□□□□□ -0.58
RHO-201ENST00000296271 BTBD3Q9Y2F9 522 aa11.46□□□□□ -0.58
RHO-201ENST00000296271 MYRFQ9Y2G1 1151 aa11.46□□□□□ -0.58
RHO-201ENST00000296271 CEPT1Q9Y6K0 416 aa11.46□□□□□ -0.58
RHO-201ENST00000296271 CLOCKO15516 846 aa11.45□□□□□ -0.58
RHO-201ENST00000296271 ANXA6P08133 673 aa11.45□□□□□ -0.58
RHO-201ENST00000296271 PTPN2P17706 415 aa11.45□□□□□ -0.58
RHO-201ENST00000296271 POLR2EP19388 210 aaKnown RBP11.45□□□□□ -0.58
RHO-201ENST00000296271 ELK4P28324 431 aa11.45□□□□□ -0.58
RHO-201ENST00000296271 RECQLP46063 649 aaPredicted RBP11.45□□□□□ -0.58
RHO-201ENST00000296271 RPS9P46781 194 aaKnown RBP11.45□□□□□ -0.58
RHO-201ENST00000296271 SLC6A11P48066 632 aa11.45□□□□□ -0.58
RHO-201ENST00000296271 CASP9P55211 416 aa11.45□□□□□ -0.58
RHO-201ENST00000296271 HTRA4P83105 476 aaPredicted RBP11.45□□□□□ -0.58
RHO-201ENST00000296271 TSTA3Q13630 321 aaPredicted RBP11.45□□□□□ -0.58
RHO-201ENST00000296271 FXNQ16595 210 aa11.45□□□□□ -0.58
RHO-201ENST00000296271 CACHD1Q5VU97 1274 aa11.45□□□□□ -0.58
RHO-201ENST00000296271 CYP2U1Q7Z449 544 aa11.45□□□□□ -0.58
RHO-201ENST00000296271 MFSD2AQ8NA29 543 aa11.45□□□□□ -0.58
RHO-201ENST00000296271 PAPD5Q8NDF8 572 aaKnown RBP11.45□□□□□ -0.58
RHO-201ENST00000296271 SPPL3Q8TCT6 385 aa11.45□□□□□ -0.58
RHO-201ENST00000296271 CLP1Q92989 425 aaKnown RBP11.45□□□□□ -0.58
RHO-201ENST00000296271 ZNF641Q96N77 438 aaPredicted RBP11.45□□□□□ -0.58
RHO-201ENST00000296271 OR4K3Q96R72 315 aa11.45□□□□□ -0.58
RHO-201ENST00000296271 ZBTB18Q99592 522 aa11.45□□□□□ -0.58
RHO-201ENST00000296271 PNPLA3Q9NST1 481 aa11.45□□□□□ -0.58
RHO-201ENST00000296271 SAGE1Q9NXZ1 904 aa11.45□□□□□ -0.58
RHO-201ENST00000296271 SH2B3Q9UQQ2 575 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms