RNA–Protein interactions for RNA: ENST00000287701.14

HMBOX1-201, Transcript of homeobox containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMBOX1, Length 3,184 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-201ENST00000287701 LINC00116Q8NCU8 138 aa9.63□□□□□ -0.87
HMBOX1-201ENST00000287701 OR52H1Q8NGJ2 320 aa9.63□□□□□ -0.87
HMBOX1-201ENST00000287701 FBXO30Q8TB52 745 aa9.63□□□□□ -0.87
HMBOX1-201ENST00000287701 RNF139Q8WU17 664 aa9.63□□□□□ -0.87
HMBOX1-201ENST00000287701 SMG7Q92540 1137 aaKnown RBP9.63□□□□□ -0.87
HMBOX1-201ENST00000287701 MID1IP1Q9NPA3 183 aa9.63□□□□□ -0.87
HMBOX1-201ENST00000287701 CUEDC1Q9NWM3 386 aaPredicted RBP9.63□□□□□ -0.87
HMBOX1-201ENST00000287701 POLLQ9UGP5 575 aa9.63□□□□□ -0.87
HMBOX1-201ENST00000287701 PHF11Q9UIL8 331 aa9.63□□□□□ -0.87
HMBOX1-201ENST00000287701 INVSQ9Y283 1065 aa9.63□□□□□ -0.87
HMBOX1-201ENST00000287701 BRCA1P38398 1863 aaKnown RBP9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 C9JVG2 144 aa9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 BTN3A3O00478 584 aa9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 PPP6CO00743 305 aa9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 ZBTB24O43167 697 aaPredicted RBP9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 MITFO75030 526 aaPredicted RBP9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 SLC43A1O75387 559 aa9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 PAHP00439 452 aa9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 HOXA9P31269 272 aa9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 JAG1P78504 1218 aa9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 CTBP1Q13363 440 aa9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 LAPTM5Q13571 262 aa9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 TATDN3Q17R31 274 aa9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 FAM182BQ5T319 152 aa9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 DDX53Q86TM3 631 aaKnown RBP9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 ISCA2Q86U28 154 aa9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 C1orf52Q8N6N3 182 aaKnown RBP9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 UBASH3BQ8TF42 649 aa9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 SLC35F5Q8WV83 523 aa9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 COQ8BQ96D53 544 aa9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 TBCDQ9BTW9 1192 aa9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 HTATIP2Q9BUP3 242 aa9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 BEX2Q9BXY8 128 aa9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 CCSER2Q9H7U1 834 aa9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 ZNF277Q9NRM2 450 aaPredicted RBP9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 TREX1Q9NSU2 369 aa9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 STUB1Q9UNE7 303 aa9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 LOC100506127A0A0U1RQW1 187 aa9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 CLCA1A8K7I4 914 aa9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 CXCR6O00574 342 aa9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 MYL12BO14950 172 aa9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 MSCO60682 206 aa9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 DPM1O60762 260 aa9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 ADAM11O75078 769 aa9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 PTP4A3O75365 173 aa9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 RAF1P04049 648 aa9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 ITGB6P18564 788 aa9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 MYL12AP19105 171 aa9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 TPMTP51580 245 aa9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 CLCN3P51790 818 aa9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 SCRN3Q0VDG4 424 aa9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 SIM2Q14190 667 aaPredicted RBP9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 ZNF273Q14593 569 aa9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 KLHL12Q53G59 568 aa9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 ALFQ53S48 1182 aa9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 TFAP2EQ6VUC0 442 aa9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 PGBD3Q8N328 593 aa9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 DNAJC22Q8N4W6 341 aa9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 PPHLN1Q8NEY8 458 aaKnown RBP9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 PROKR1Q8TCW9 393 aa9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 DNASE1L2Q92874 299 aa9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 HRASLS5Q96KN8 279 aa9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 KLHL15Q96M94 604 aa9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 GABARAPL3Q9BY60 117 aa9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 MCOLN1Q9GZU1 580 aa9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 SLC6A17Q9H1V8 727 aa9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 HEBP1Q9NRV9 189 aa9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 FAM105AQ9NUU6 356 aa9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 TMEM39AQ9NV64 488 aa9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 GIMAP2Q9UG22 337 aa9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 TNPO3Q9Y5L0 923 aaKnown RBP9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 ALG5Q9Y673 324 aa9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 STON1Q9Y6Q2 735 aa9.62□□□□□ -0.87
HMBOX1-201ENST00000287701 ELOVL7A1L3X0 281 aa9.61□□□□□ -0.87
HMBOX1-201ENST00000287701 EFCAB10A6NFE3 127 aa9.61□□□□□ -0.87
HMBOX1-201ENST00000287701 PITPNM1O00562 1244 aa9.61□□□□□ -0.87
HMBOX1-201ENST00000287701 KHNYNO15037 678 aaKnown RBP9.61□□□□□ -0.87
HMBOX1-201ENST00000287701 SLC7A4O43246 635 aa9.61□□□□□ -0.87
HMBOX1-201ENST00000287701 HRO43593 1189 aa9.61□□□□□ -0.87
HMBOX1-201ENST00000287701 HCN1O60741 890 aa9.61□□□□□ -0.87
HMBOX1-201ENST00000287701 AOC2O75106 756 aa9.61□□□□□ -0.87
HMBOX1-201ENST00000287701 LGI1O95970 557 aa9.61□□□□□ -0.87
HMBOX1-201ENST00000287701 BRCC3P46736 316 aa9.61□□□□□ -0.87
HMBOX1-201ENST00000287701 PLK1P53350 603 aa9.61□□□□□ -0.87
HMBOX1-201ENST00000287701 BCAT1P54687 386 aa9.61□□□□□ -0.87
HMBOX1-201ENST00000287701 CLDN20P56880 219 aa9.61□□□□□ -0.87
HMBOX1-201ENST00000287701 SNRPD2P62316 118 aaKnown RBP9.61□□□□□ -0.87
HMBOX1-201ENST00000287701 ZNF33AQ06730 810 aa9.61□□□□□ -0.87
HMBOX1-201ENST00000287701 DBPQ10586 325 aaPredicted RBP9.61□□□□□ -0.87
HMBOX1-201ENST00000287701 PON2Q15165 354 aa9.61□□□□□ -0.87
HMBOX1-201ENST00000287701 CRY2Q49AN0 593 aa9.61□□□□□ -0.87
HMBOX1-201ENST00000287701 ABHD15Q6UXT9 468 aa9.61□□□□□ -0.87
HMBOX1-201ENST00000287701 BNIPLQ7Z465 357 aa9.61□□□□□ -0.87
HMBOX1-201ENST00000287701 CCDC71Q8IV32 467 aaPredicted RBP9.61□□□□□ -0.87
HMBOX1-201ENST00000287701 ENTHD1Q8IYW4 607 aa9.61□□□□□ -0.87
HMBOX1-201ENST00000287701 RHEBL1Q8TAI7 183 aa9.61□□□□□ -0.87
HMBOX1-201ENST00000287701 ENKURQ8TC29 256 aa9.61□□□□□ -0.87
HMBOX1-201ENST00000287701 TRPM4Q8TD43 1214 aa9.61□□□□□ -0.87
HMBOX1-201ENST00000287701 AHCYL2Q96HN2 611 aaKnown RBP9.61□□□□□ -0.87
HMBOX1-201ENST00000287701 B3GALT6Q96L58 329 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms