RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 RASSF1Q9NS23 344 aa18.13■□□□□ 0.49
PCDH1-201ENST00000287008 SLC17A6Q9P2U8 582 aa18.13■□□□□ 0.49
PCDH1-201ENST00000287008 PPM1HQ9ULR3 514 aa18.13■□□□□ 0.49
PCDH1-201ENST00000287008 FAM208AQ9UK61 1670 aaKnown RBP18.13■□□□□ 0.49
PCDH1-201ENST00000287008 A8MU76 341 aa18.13■□□□□ 0.49
PCDH1-201ENST00000287008 NME6O75414 186 aaPredicted RBP18.13■□□□□ 0.49
PCDH1-201ENST00000287008 LEFTY1O75610 366 aa18.13■□□□□ 0.49
PCDH1-201ENST00000287008 EIPR1Q53HC9 387 aa18.13■□□□□ 0.49
PCDH1-201ENST00000287008 AGTRAPQ6RW13 159 aa18.13■□□□□ 0.49
PCDH1-201ENST00000287008 RINLQ6ZS11 566 aa18.13■□□□□ 0.49
PCDH1-201ENST00000287008 TLCD1Q96CP7 247 aa18.13■□□□□ 0.49
PCDH1-201ENST00000287008 GALPQ9UBC7 116 aa18.13■□□□□ 0.49
PCDH1-201ENST00000287008 BTBD3Q9Y2F9 522 aa18.13■□□□□ 0.49
PCDH1-201ENST00000287008 RFPL2O75678 378 aa18.13■□□□□ 0.49
PCDH1-201ENST00000287008 SLC7A1P30825 629 aa18.13■□□□□ 0.49
PCDH1-201ENST00000287008 ATP1A4Q13733 1029 aa18.13■□□□□ 0.49
PCDH1-201ENST00000287008 ELAVL3Q14576 367 aaKnown RBP18.13■□□□□ 0.49
PCDH1-201ENST00000287008 DPY19L3Q6ZPD9 716 aa18.13■□□□□ 0.49
PCDH1-201ENST00000287008 GALNT5Q7Z7M9 940 aa18.13■□□□□ 0.49
PCDH1-201ENST00000287008 NXPE1Q8N323 547 aa18.13■□□□□ 0.49
PCDH1-201ENST00000287008 FEM1AQ9BSK4 669 aa18.13■□□□□ 0.49
PCDH1-201ENST00000287008 PNO1Q9NRX1 252 aaKnown RBP18.13■□□□□ 0.49
PCDH1-201ENST00000287008 KCTD3Q9Y597 815 aa18.13■□□□□ 0.49
PCDH1-201ENST00000287008 IDH3AP50213 366 aa18.12■□□□□ 0.49
PCDH1-201ENST00000287008 CDH12P55289 794 aa18.12■□□□□ 0.49
PCDH1-201ENST00000287008 IRF9Q00978 393 aa18.12■□□□□ 0.49
PCDH1-201ENST00000287008 PTCHD3Q3KNS1 767 aa18.12■□□□□ 0.49
PCDH1-201ENST00000287008 CDK15Q96Q40 435 aa18.12■□□□□ 0.49
PCDH1-201ENST00000287008 SH3GL2Q99962 352 aa18.12■□□□□ 0.49
PCDH1-201ENST00000287008 PAAF1Q9BRP4 392 aa18.12■□□□□ 0.49
PCDH1-201ENST00000287008 FAM192AQ9GZU8 254 aa18.12■□□□□ 0.49
PCDH1-201ENST00000287008 KNL1Q8NG31 2342 aa18.12■□□□□ 0.49
PCDH1-201ENST00000287008 FAM234BA2RU67 622 aa18.12■□□□□ 0.49
PCDH1-201ENST00000287008 A8MT66 165 aa18.12■□□□□ 0.49
PCDH1-201ENST00000287008 PGM3O95394 542 aa18.12■□□□□ 0.49
PCDH1-201ENST00000287008 MT-ND1P03886 318 aa18.12■□□□□ 0.49
PCDH1-201ENST00000287008 LMAN2Q12907 356 aa18.12■□□□□ 0.49
PCDH1-201ENST00000287008 HKDC1Q2TB90 917 aa18.12■□□□□ 0.49
PCDH1-201ENST00000287008 MORN1Q5T089 497 aa18.12■□□□□ 0.49
PCDH1-201ENST00000287008 SLC25A24Q6NUK1 477 aa18.12■□□□□ 0.49
PCDH1-201ENST00000287008 TMIGD1Q6UXZ0 262 aa18.12■□□□□ 0.49
PCDH1-201ENST00000287008 DEFB119Q8N690 84 aa18.12■□□□□ 0.49
PCDH1-201ENST00000287008 C1GALT1C1Q96EU7 318 aa18.12■□□□□ 0.49
PCDH1-201ENST00000287008 TSGA13Q96PP4 275 aa18.12■□□□□ 0.49
PCDH1-201ENST00000287008 WDR6Q9NNW5 1121 aaKnown RBP18.12■□□□□ 0.49
PCDH1-201ENST00000287008 CFL2Q9Y281 166 aa18.12■□□□□ 0.49
PCDH1-201ENST00000287008 IGKV6D-21A0A0A0MT36 114 aa18.12■□□□□ 0.49
PCDH1-201ENST00000287008 TULP3O75386 442 aa18.12■□□□□ 0.49
PCDH1-201ENST00000287008 RPL5P46777 297 aaKnown RBP18.12■□□□□ 0.49
PCDH1-201ENST00000287008 PTPN5P54829 565 aa18.12■□□□□ 0.49
PCDH1-201ENST00000287008 CCNIQ14094 377 aa18.12■□□□□ 0.49
PCDH1-201ENST00000287008 PQLC3Q8N755 202 aa18.12■□□□□ 0.49
PCDH1-201ENST00000287008 TRPV3Q8NET8 790 aa18.12■□□□□ 0.49
PCDH1-201ENST00000287008 FAM110BQ8TC76 370 aa18.12■□□□□ 0.49
PCDH1-201ENST00000287008 EFHD2Q96C19 240 aaPredicted RBP18.12■□□□□ 0.49
PCDH1-201ENST00000287008 NSMCE3Q96MG7 304 aa18.12■□□□□ 0.49
PCDH1-201ENST00000287008 GPER1Q99527 375 aa18.12■□□□□ 0.49
PCDH1-201ENST00000287008 SLC2A11Q9BYW1 496 aa18.12■□□□□ 0.49
PCDH1-201ENST00000287008 CLK4Q9HAZ1 481 aaKnown RBP18.12■□□□□ 0.49
PCDH1-201ENST00000287008 OXSMQ9NWU1 459 aa18.12■□□□□ 0.49
PCDH1-201ENST00000287008 THUMPD1Q9NXG2 353 aaKnown RBP18.12■□□□□ 0.49
PCDH1-201ENST00000287008 MYH2Q9UKX2 1941 aa18.12■□□□□ 0.49
PCDH1-201ENST00000287008 FAM159BA6NKW6 160 aa18.11■□□□□ 0.49
PCDH1-201ENST00000287008 CDC7O00311 574 aa18.11■□□□□ 0.49
PCDH1-201ENST00000287008 PAPSS2O95340 614 aaPredicted RBP18.11■□□□□ 0.49
PCDH1-201ENST00000287008 SEC24AO95486 1093 aa18.11■□□□□ 0.49
PCDH1-201ENST00000287008 LDOC1O95751 146 aaPredicted RBP18.11■□□□□ 0.49
PCDH1-201ENST00000287008 YAP1P46937 504 aaKnown RBP18.11■□□□□ 0.49
PCDH1-201ENST00000287008 SRP54P61011 504 aaKnown RBP18.11■□□□□ 0.49
PCDH1-201ENST00000287008 XIAPP98170 497 aa18.11■□□□□ 0.49
PCDH1-201ENST00000287008 DPYSQ14117 519 aa18.11■□□□□ 0.49
PCDH1-201ENST00000287008 SPIN4Q56A73 249 aa18.11■□□□□ 0.49
PCDH1-201ENST00000287008 ZNF311Q5JNZ3 666 aa18.11■□□□□ 0.49
PCDH1-201ENST00000287008 KLHL17Q6TDP4 642 aa18.11■□□□□ 0.49
PCDH1-201ENST00000287008 C1orf52Q8N6N3 182 aaKnown RBP18.11■□□□□ 0.49
PCDH1-201ENST00000287008 DENND1AQ8TEH3 1009 aa18.11■□□□□ 0.49
PCDH1-201ENST00000287008 RHBDL2Q9NX52 303 aa18.11■□□□□ 0.49
PCDH1-201ENST00000287008 SERTAD3Q9UJW9 196 aa18.11■□□□□ 0.49
PCDH1-201ENST00000287008 CHD2O14647 1828 aaKnown RBP18.11■□□□□ 0.49
PCDH1-201ENST00000287008 A8MUA0 341 aa18.11■□□□□ 0.49
PCDH1-201ENST00000287008 CREB1P16220 341 aa18.11■□□□□ 0.49
PCDH1-201ENST00000287008 HOXA11P31270 313 aaPredicted RBP18.11■□□□□ 0.49
PCDH1-201ENST00000287008 GRIA2P42262 883 aa18.11■□□□□ 0.49
PCDH1-201ENST00000287008 TMEM115Q12893 351 aaPredicted RBP18.11■□□□□ 0.49
PCDH1-201ENST00000287008 RAB33AQ14088 237 aa18.11■□□□□ 0.49
PCDH1-201ENST00000287008 ARHGAP40Q5TG30 622 aa18.11■□□□□ 0.49
PCDH1-201ENST00000287008 MZT2BQ6NZ67 158 aa18.11■□□□□ 0.49
PCDH1-201ENST00000287008 KRT74Q7RTS7 529 aa18.11■□□□□ 0.49
PCDH1-201ENST00000287008 UMODL1-AS1Q8N2C9 162 aa18.11■□□□□ 0.49
PCDH1-201ENST00000287008 CKLFQ9UBR5 152 aa18.11■□□□□ 0.49
PCDH1-201ENST00000287008 SUSD2Q9UGT4 822 aa18.11■□□□□ 0.49
PCDH1-201ENST00000287008 LCHNA4D1U4 455 aa18.11■□□□□ 0.49
PCDH1-201ENST00000287008 OAZ2O95190 189 aa18.11■□□□□ 0.49
PCDH1-201ENST00000287008 TIMP1P01033 207 aa18.11■□□□□ 0.49
PCDH1-201ENST00000287008 TYRP1P17643 537 aa18.11■□□□□ 0.49
PCDH1-201ENST00000287008 GKP32189 559 aa18.11■□□□□ 0.49
PCDH1-201ENST00000287008 FOLH1Q04609 750 aa18.11■□□□□ 0.49
PCDH1-201ENST00000287008 DLG1Q12959 904 aa18.11■□□□□ 0.49
PCDH1-201ENST00000287008 SEMA3AQ14563 771 aa18.11■□□□□ 0.49
PCDH1-201ENST00000287008 BTN2A1Q7KYR7 527 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms