RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.89□□□□□ -1.47
TNFSF4-201ENST00000281834 PYCR3Q53H96 274 aa5.89□□□□□ -1.47
TNFSF4-201ENST00000281834 ZNF805Q5CZA5 627 aa5.89□□□□□ -1.47
TNFSF4-201ENST00000281834 FAM78AQ5JUQ0 283 aa5.89□□□□□ -1.47
TNFSF4-201ENST00000281834 PRAMEF9Q5VWM5 478 aa5.89□□□□□ -1.47
TNFSF4-201ENST00000281834 LYPLAL1Q5VWZ2 237 aa5.89□□□□□ -1.47
TNFSF4-201ENST00000281834 ARMC3Q5W041 872 aa5.89□□□□□ -1.47
TNFSF4-201ENST00000281834 LIPIQ6XZB0 460 aa5.89□□□□□ -1.47
TNFSF4-201ENST00000281834 ZBTB46Q86UZ6 589 aa5.89□□□□□ -1.47
TNFSF4-201ENST00000281834 SYT12Q8IV01 421 aa5.89□□□□□ -1.47
TNFSF4-201ENST00000281834 HID1Q8IV36 788 aa5.89□□□□□ -1.47
TNFSF4-201ENST00000281834 CHPFQ8IZ52 775 aa5.89□□□□□ -1.47
TNFSF4-201ENST00000281834 MINDY1Q8N5J2 469 aa5.89□□□□□ -1.47
TNFSF4-201ENST00000281834 OR7A2PQ8NGA2 310 aa5.89□□□□□ -1.47
TNFSF4-201ENST00000281834 FGF13Q92913 245 aa5.89□□□□□ -1.47
TNFSF4-201ENST00000281834 ECHDC3Q96DC8 303 aa5.89□□□□□ -1.47
TNFSF4-201ENST00000281834 MCCC1Q96RQ3 725 aaPredicted RBP5.89□□□□□ -1.47
TNFSF4-201ENST00000281834 DNAJC11Q9NVH1 559 aa5.89□□□□□ -1.47
TNFSF4-201ENST00000281834 PDP2Q9P2J9 529 aa5.89□□□□□ -1.47
TNFSF4-201ENST00000281834 TCRBV3S1A0A5B6 114 aa5.89□□□□□ -1.47
TNFSF4-201ENST00000281834 WNT9AO14904 365 aa5.89□□□□□ -1.47
TNFSF4-201ENST00000281834 CASQ2O14958 399 aaPredicted RBP5.89□□□□□ -1.47
TNFSF4-201ENST00000281834 EEDO75530 441 aaKnown RBP5.89□□□□□ -1.47
TNFSF4-201ENST00000281834 ADH1CP00326 375 aa5.89□□□□□ -1.47
TNFSF4-201ENST00000281834 PCCBP05166 539 aa5.89□□□□□ -1.47
TNFSF4-201ENST00000281834 SERPIND1P05546 499 aa5.89□□□□□ -1.47
TNFSF4-201ENST00000281834 ZNF26P17031 533 aaPredicted RBP5.89□□□□□ -1.47
TNFSF4-201ENST00000281834 GSSP48637 474 aa5.89□□□□□ -1.47
TNFSF4-201ENST00000281834 TPD52P55327 224 aaPredicted RBP5.89□□□□□ -1.47
TNFSF4-201ENST00000281834 RPS14P62263 151 aaKnown RBP5.89□□□□□ -1.47
TNFSF4-201ENST00000281834 CYP4F2P78329 520 aa5.89□□□□□ -1.47
TNFSF4-201ENST00000281834 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.89□□□□□ -1.47
TNFSF4-201ENST00000281834 C1orf53Q5VUE5 145 aa5.89□□□□□ -1.47
TNFSF4-201ENST00000281834 PRMT9Q6P2P2 845 aa5.89□□□□□ -1.47
TNFSF4-201ENST00000281834 CATSPER1Q8NEC5 780 aa5.89□□□□□ -1.47
TNFSF4-201ENST00000281834 FRS2Q8WU20 508 aa5.89□□□□□ -1.47
TNFSF4-201ENST00000281834 ASB11Q8WXH4 323 aa5.89□□□□□ -1.47
TNFSF4-201ENST00000281834 SNX19Q92543 992 aa5.89□□□□□ -1.47
TNFSF4-201ENST00000281834 GLYATL1Q969I3 302 aa5.89□□□□□ -1.47
TNFSF4-201ENST00000281834 BIRC7Q96CA5 298 aa5.89□□□□□ -1.47
TNFSF4-201ENST00000281834 FAM120BQ96EK7 910 aaKnown RBP5.89□□□□□ -1.47
TNFSF4-201ENST00000281834 PDLIM5Q96HC4 596 aaKnown RBP5.89□□□□□ -1.47
TNFSF4-201ENST00000281834 GPATCH1Q9BRR8 931 aaKnown RBP5.89□□□□□ -1.47
TNFSF4-201ENST00000281834 LTB4R2Q9NPC1 389 aa5.89□□□□□ -1.47
TNFSF4-201ENST00000281834 GPRC5BQ9NZH0 403 aa5.89□□□□□ -1.47
TNFSF4-201ENST00000281834 ZIM2Q9NZV7 527 aa5.89□□□□□ -1.47
TNFSF4-201ENST00000281834 ACTR3BQ9P1U1 418 aa5.89□□□□□ -1.47
TNFSF4-201ENST00000281834 PCDHA9Q9Y5H5 950 aa5.89□□□□□ -1.47
TNFSF4-201ENST00000281834 ZFC3H1O60293 1989 aaKnown RBP5.88□□□□□ -1.47
TNFSF4-201ENST00000281834 TRIOBPQ9H2D6 2365 aa5.88□□□□□ -1.47
TNFSF4-201ENST00000281834 HEPACAM2A8MVW5 462 aa5.88□□□□□ -1.47
TNFSF4-201ENST00000281834 NOBOXO60393 691 aa5.88□□□□□ -1.47
TNFSF4-201ENST00000281834 ATG13O75143 517 aa5.88□□□□□ -1.47
TNFSF4-201ENST00000281834 LDLRP01130 860 aa5.88□□□□□ -1.47
TNFSF4-201ENST00000281834 C8BP07358 591 aa5.88□□□□□ -1.47
TNFSF4-201ENST00000281834 EPORP19235 508 aa5.88□□□□□ -1.47
TNFSF4-201ENST00000281834 PRKACGP22612 351 aa5.88□□□□□ -1.47
TNFSF4-201ENST00000281834 EEF1B2P24534 225 aaKnown RBP5.88□□□□□ -1.47
TNFSF4-201ENST00000281834 MAT2AP31153 395 aaKnown RBP5.88□□□□□ -1.47
TNFSF4-201ENST00000281834 ZFP36L2P47974 494 aaKnown RBP5.88□□□□□ -1.47
TNFSF4-201ENST00000281834 MYBPC1Q00872 1141 aa5.88□□□□□ -1.47
TNFSF4-201ENST00000281834 ACSM2AQ08AH3 577 aa5.88□□□□□ -1.47
TNFSF4-201ENST00000281834 GTF2H3Q13889 308 aa5.88□□□□□ -1.47
TNFSF4-201ENST00000281834 NFE2L1Q14494 772 aa5.88□□□□□ -1.47
TNFSF4-201ENST00000281834 PDCD4Q53EL6 469 aaKnown RBP5.88□□□□□ -1.47
TNFSF4-201ENST00000281834 FRG2Q64ET8 278 aa5.88□□□□□ -1.47
TNFSF4-201ENST00000281834 ACSM2BQ68CK6 577 aa5.88□□□□□ -1.47
TNFSF4-201ENST00000281834 ANKRD34AQ69YU3 496 aa5.88□□□□□ -1.47
TNFSF4-201ENST00000281834 AGTRAPQ6RW13 159 aa5.88□□□□□ -1.47
TNFSF4-201ENST00000281834 ENPP6Q6UWR7 440 aa5.88□□□□□ -1.47
TNFSF4-201ENST00000281834 ADCK2Q7Z695 626 aa5.88□□□□□ -1.47
TNFSF4-201ENST00000281834 THOC6Q86W42 341 aaKnown RBP5.88□□□□□ -1.47
TNFSF4-201ENST00000281834 ADGRG5Q8IZF4 528 aa5.88□□□□□ -1.47
TNFSF4-201ENST00000281834 C10orf111Q8N326 155 aa5.88□□□□□ -1.47
TNFSF4-201ENST00000281834 CBARPQ8N350 705 aaPredicted RBP5.88□□□□□ -1.47
TNFSF4-201ENST00000281834 BPIFB1Q8TDL5 484 aa5.88□□□□□ -1.47
TNFSF4-201ENST00000281834 SUSD6Q92537 303 aa5.88□□□□□ -1.47
TNFSF4-201ENST00000281834 VOPP1Q96AW1 172 aa5.88□□□□□ -1.47
TNFSF4-201ENST00000281834 ZNF707Q96C28 371 aaPredicted RBP5.88□□□□□ -1.47
TNFSF4-201ENST00000281834 MRGPRX3Q96LB0 322 aa5.88□□□□□ -1.47
TNFSF4-201ENST00000281834 FOPNLQ96NB1 174 aa5.88□□□□□ -1.47
TNFSF4-201ENST00000281834 FRG2BQ96QU4 278 aa5.88□□□□□ -1.47
TNFSF4-201ENST00000281834 CCT7Q99832 543 aa5.88□□□□□ -1.47
TNFSF4-201ENST00000281834 DPH2Q9BQC3 489 aaPredicted RBP5.88□□□□□ -1.47
TNFSF4-201ENST00000281834 KXD1Q9BQD3 176 aa5.88□□□□□ -1.47
TNFSF4-201ENST00000281834 CPEB1Q9BZB8 566 aaKnown RBP5.88□□□□□ -1.47
TNFSF4-201ENST00000281834 BRINP2Q9C0B6 783 aa5.88□□□□□ -1.47
TNFSF4-201ENST00000281834 SGK2Q9HBY8 427 aa5.88□□□□□ -1.47
TNFSF4-201ENST00000281834 DDX18Q9NVP1 670 aaKnown RBP5.88□□□□□ -1.47
TNFSF4-201ENST00000281834 ADGRE2Q9UHX3 823 aa5.88□□□□□ -1.47
TNFSF4-201ENST00000281834 SNX6Q9UNH7 406 aa5.88□□□□□ -1.47
TNFSF4-201ENST00000281834 ASF1AQ9Y294 204 aa5.88□□□□□ -1.47
TNFSF4-201ENST00000281834 A0A0G2JN53 185 aa5.88□□□□□ -1.47
TNFSF4-201ENST00000281834 MYO1GB0I1T2 1018 aa5.88□□□□□ -1.47
TNFSF4-201ENST00000281834 SLC28A1O00337 649 aa5.88□□□□□ -1.47
TNFSF4-201ENST00000281834 RFXANKO14593 260 aa5.88□□□□□ -1.47
TNFSF4-201ENST00000281834 SLC9A3R1O14745 358 aaPredicted RBP5.88□□□□□ -1.47
TNFSF4-201ENST00000281834 TGFB1P01137 390 aa5.88□□□□□ -1.47
TNFSF4-201ENST00000281834 FTH1P02794 183 aa5.88□□□□□ -1.47
TNFSF4-201ENST00000281834 CATP04040 527 aaKnown RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms