RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 HIC2Q96JB3 615 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 ACPTQ9BZG2 426 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 RSPH9Q9H1X1 276 aaPredicted RBP9.33□□□□□ -0.92
TRIM55-201ENST00000276573 VCX3BQ9H321 246 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 ELOVL6Q9H5J4 265 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 SLAMF8Q9P0V8 285 aa9.33□□□□□ -0.92
TRIM55-201ENST00000276573 IGLON5A6NGN9 336 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 NPIPB8E9PQR5 432 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 UGDHO60701 494 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 C1orf105O95561 183 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 STAMBPO95630 424 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 PRPH2P23942 346 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 VARSP26640 1264 aaKnown RBP9.32□□□□□ -0.92
TRIM55-201ENST00000276573 BDKRB1P46663 353 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 SOX9P48436 509 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 CCR3P51677 355 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 DGKQP52824 942 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 TAS2R38P59533 333 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 IRF8Q02556 426 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 PLOD1Q02809 727 aaPredicted RBP9.32□□□□□ -0.92
TRIM55-201ENST00000276573 DLX2Q07687 328 aaPredicted RBP9.32□□□□□ -0.92
TRIM55-201ENST00000276573 PCDH1Q08174 1060 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 ADGRE1Q14246 886 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 TRIP10Q15642 601 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 CST6Q15828 149 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 LRRC36Q1X8D7 754 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 USP39Q53GS9 565 aaKnown RBP9.32□□□□□ -0.92
TRIM55-201ENST00000276573 OGFRL1Q5TC84 451 aaPredicted RBP9.32□□□□□ -0.92
TRIM55-201ENST00000276573 NANOGP8Q6NSW7 305 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 PNCKQ6P2M8 343 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 XKR5Q6UX68 686 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 IZUMO2Q6UXV1 221 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 ADAMTSL4Q6UY14 1074 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 DLEU7Q6UYE1 221 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.32□□□□□ -0.92
TRIM55-201ENST00000276573 TRAPPC5Q8IUR0 188 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 TMEM126BQ8IUX1 230 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 HID1Q8IV36 788 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 ZNF547Q8IVP9 402 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 CHPFQ8IZ52 775 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 LILRA2Q8N149 483 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 OR56A3Q8NH54 315 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 RIPOR3Q96MK2 946 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 ZBTB18Q99592 522 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 DPY30Q9C005 99 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 COPS7BQ9H9Q2 264 aaPredicted RBP9.32□□□□□ -0.92
TRIM55-201ENST00000276573 NANOGQ9H9S0 305 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 LRCH1Q9Y2L9 728 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 AP4S1Q9Y587 144 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 DENND4AQ7Z401 1863 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 DOCK8Q8NF50 2099 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 K7EQS6 105 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 RNASEH1O60930 286 aaKnown RBP9.32□□□□□ -0.92
TRIM55-201ENST00000276573 RNASEH2AO75792 299 aaKnown RBP9.32□□□□□ -0.92
TRIM55-201ENST00000276573 SLC16A8O95907 504 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 PRPS2P11908 318 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 BCKDHAP12694 445 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 C5AR1P21730 350 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 PEX2P28328 305 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 IMPA1P29218 277 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 CASP2P42575 452 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 EEFSECP57772 596 aaKnown RBP9.32□□□□□ -0.92
TRIM55-201ENST00000276573 ZNF33BQ06732 778 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 BNIP2Q12982 314 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 DOC2AQ14183 400 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 PTGR1Q14914 329 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 C2orf27AQ580R0 203 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 SFT2D3Q587I9 215 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 RABL3Q5HYI8 236 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 FRG2Q64ET8 278 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 SUSD1Q6UWL2 747 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 CYP2R1Q6VVX0 501 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 PRR23BQ6ZRT6 265 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 PDSS2Q86YH6 399 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 KIAA2013Q8IYS2 634 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 PLCD3Q8N3E9 789 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 HDDC3Q8N4P3 179 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 ZNF513Q8N8E2 541 aaPredicted RBP9.32□□□□□ -0.92
TRIM55-201ENST00000276573 GLB1L3Q8NCI6 653 aaPredicted RBP9.32□□□□□ -0.92
TRIM55-201ENST00000276573 OR2L2Q8NH16 312 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 CMTM7Q96FZ5 175 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 LRGUKQ96M69 825 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 FRG2BQ96QU4 278 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 OR4K3Q96R72 315 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 PKP2Q99959 881 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 RIMS3Q9UJD0 308 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 TMEM98Q9Y2Y6 226 aa9.32□□□□□ -0.92
TRIM55-201ENST00000276573 TRANK1O15050 2925 aa9.31□□□□□ -0.92
TRIM55-201ENST00000276573 MGAT4DA6NG13 374 aa9.31□□□□□ -0.92
TRIM55-201ENST00000276573 CLGNO14967 610 aa9.31□□□□□ -0.92
TRIM55-201ENST00000276573 PCDH8O95206 1070 aa9.31□□□□□ -0.92
TRIM55-201ENST00000276573 ADH1BP00325 375 aa9.31□□□□□ -0.92
TRIM55-201ENST00000276573 CAPNS1P04632 268 aa9.31□□□□□ -0.92
TRIM55-201ENST00000276573 CD22P20273 847 aa9.31□□□□□ -0.92
TRIM55-201ENST00000276573 SLC7A1P30825 629 aa9.31□□□□□ -0.92
TRIM55-201ENST00000276573 TIE1P35590 1138 aa9.31□□□□□ -0.92
TRIM55-201ENST00000276573 MTHFRP42898 656 aa9.31□□□□□ -0.92
TRIM55-201ENST00000276573 KIR2DL1P43626 348 aaPredicted RBP9.31□□□□□ -0.92
TRIM55-201ENST00000276573 GSK3BP49841 420 aa9.31□□□□□ -0.92
TRIM55-201ENST00000276573 CLDN8P56748 225 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms