RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 DNAJB14Q8TBM8 379 aa10.11□□□□□ -0.79
UPF3B-201ENST00000276201 CELF6Q96J87 481 aaKnown RBP10.11□□□□□ -0.79
UPF3B-201ENST00000276201 AMBRA1Q9C0C7 1298 aa10.11□□□□□ -0.79
UPF3B-201ENST00000276201 GABARAPL1Q9H0R8 117 aa10.11□□□□□ -0.79
UPF3B-201ENST00000276201 DUSP21Q9H596 190 aa10.11□□□□□ -0.79
UPF3B-201ENST00000276201 TDP1Q9NUW8 608 aa10.11□□□□□ -0.79
UPF3B-201ENST00000276201 WNT16Q9UBV4 365 aa10.11□□□□□ -0.79
UPF3B-201ENST00000276201 SUN2Q9UH99 717 aa10.11□□□□□ -0.79
UPF3B-201ENST00000276201 C3orf18Q9UK00 162 aa10.11□□□□□ -0.79
UPF3B-201ENST00000276201 CA14Q9ULX7 337 aa10.11□□□□□ -0.79
UPF3B-201ENST00000276201 SCML2Q9UQR0 700 aa10.11□□□□□ -0.79
UPF3B-201ENST00000276201 COL4A3Q01955 1670 aa10.11□□□□□ -0.79
UPF3B-201ENST00000276201 HELZP42694 1942 aaKnown RBP10.11□□□□□ -0.79
UPF3B-201ENST00000276201 SNX2O60749 519 aa10.1□□□□□ -0.79
UPF3B-201ENST00000276201 OLFM2O95897 454 aa10.1□□□□□ -0.79
UPF3B-201ENST00000276201 CHEK2O96017 543 aa10.1□□□□□ -0.79
UPF3B-201ENST00000276201 CKMP06732 381 aa10.1□□□□□ -0.79
UPF3B-201ENST00000276201 BMP4P12644 408 aa10.1□□□□□ -0.79
UPF3B-201ENST00000276201 TCF3P15923 654 aa10.1□□□□□ -0.79
UPF3B-201ENST00000276201 ZNF37AP17032 561 aaPredicted RBP10.1□□□□□ -0.79
UPF3B-201ENST00000276201 PFKLP17858 780 aa10.1□□□□□ -0.79
UPF3B-201ENST00000276201 CES1P23141 567 aa10.1□□□□□ -0.79
UPF3B-201ENST00000276201 GDI1P31150 447 aa10.1□□□□□ -0.79
UPF3B-201ENST00000276201 UGT2B10P36537 528 aa10.1□□□□□ -0.79
UPF3B-201ENST00000276201 FOXA1P55317 472 aa10.1□□□□□ -0.79
UPF3B-201ENST00000276201 PWP1Q13610 501 aa10.1□□□□□ -0.79
UPF3B-201ENST00000276201 ZNF181Q2M3W8 571 aa10.1□□□□□ -0.79
UPF3B-201ENST00000276201 THOC7Q6I9Y2 204 aaKnown RBP10.1□□□□□ -0.79
UPF3B-201ENST00000276201 RNF165Q6ZSG1 346 aa10.1□□□□□ -0.79
UPF3B-201ENST00000276201 STK32CQ86UX6 486 aa10.1□□□□□ -0.79
UPF3B-201ENST00000276201 SIX5Q8N196 739 aa10.1□□□□□ -0.79
UPF3B-201ENST00000276201 CLEC4FQ8N1N0 589 aa10.1□□□□□ -0.79
UPF3B-201ENST00000276201 ZCCHC7Q8N3Z6 543 aaKnown RBP10.1□□□□□ -0.79
UPF3B-201ENST00000276201 DTWD1Q8N5C7 304 aa10.1□□□□□ -0.79
UPF3B-201ENST00000276201 SETD9Q8NE22 299 aa10.1□□□□□ -0.79
UPF3B-201ENST00000276201 RHOXF1Q8NHV9 184 aa10.1□□□□□ -0.79
UPF3B-201ENST00000276201 ZFP90Q8TF47 636 aa10.1□□□□□ -0.79
UPF3B-201ENST00000276201 VPS33AQ96AX1 596 aa10.1□□□□□ -0.79
UPF3B-201ENST00000276201 SLC39A8Q9C0K1 460 aa10.1□□□□□ -0.79
UPF3B-201ENST00000276201 RNF38Q9H0F5 515 aa10.1□□□□□ -0.79
UPF3B-201ENST00000276201 ADNPQ9H2P0 1102 aa10.1□□□□□ -0.79
UPF3B-201ENST00000276201 PARVBQ9HBI1 364 aa10.1□□□□□ -0.79
UPF3B-201ENST00000276201 SYTL2Q9HCH5 934 aa10.1□□□□□ -0.79
UPF3B-201ENST00000276201 RBM22Q9NW64 420 aaKnown RBP eCLIP10.1□□□□□ -0.79
UPF3B-201ENST00000276201 WARS2Q9UGM6 360 aaKnown RBP10.1□□□□□ -0.79
UPF3B-201ENST00000276201 ZDBF2Q9HCK1 2354 aa10.1□□□□□ -0.79
UPF3B-201ENST00000276201 SYCE1LA8MT33 242 aa10.1□□□□□ -0.79
UPF3B-201ENST00000276201 TTC34A8MYJ7 566 aa10.1□□□□□ -0.79
UPF3B-201ENST00000276201 SCELO95171 688 aa10.1□□□□□ -0.79
UPF3B-201ENST00000276201 IL7RP16871 459 aa10.1□□□□□ -0.79
UPF3B-201ENST00000276201 PSMA3P25788 255 aa10.1□□□□□ -0.79
UPF3B-201ENST00000276201 IL12AP29459 219 aa10.1□□□□□ -0.79
UPF3B-201ENST00000276201 CHRNA4P43681 627 aa10.1□□□□□ -0.79
UPF3B-201ENST00000276201 DIO3P55073 304 aa10.1□□□□□ -0.79
UPF3B-201ENST00000276201 PRKG2Q13237 762 aa10.1□□□□□ -0.79
UPF3B-201ENST00000276201 OR4D1Q15615 310 aa10.1□□□□□ -0.79
UPF3B-201ENST00000276201 ZNF77Q15935 545 aa10.1□□□□□ -0.79
UPF3B-201ENST00000276201 TMEM214Q6NUQ4 689 aaKnown RBP10.1□□□□□ -0.79
UPF3B-201ENST00000276201 ARHGAP36Q6ZRI8 547 aa10.1□□□□□ -0.79
UPF3B-201ENST00000276201 BMP8AQ7Z5Y6 402 aa10.1□□□□□ -0.79
UPF3B-201ENST00000276201 TAC4Q86UU9 113 aa10.1□□□□□ -0.79
UPF3B-201ENST00000276201 STAG3L4Q8TBR4 150 aa10.1□□□□□ -0.79
UPF3B-201ENST00000276201 HPS1Q92902 700 aa10.1□□□□□ -0.79
UPF3B-201ENST00000276201 NSMCE3Q96MG7 304 aa10.1□□□□□ -0.79
UPF3B-201ENST00000276201 SEPHS2Q99611 448 aa10.1□□□□□ -0.79
UPF3B-201ENST00000276201 AARSD1Q9BTE6 412 aaKnown RBP10.1□□□□□ -0.79
UPF3B-201ENST00000276201 EPS8L2Q9H6S3 715 aa10.1□□□□□ -0.79
UPF3B-201ENST00000276201 CCSER2Q9H7U1 834 aa10.1□□□□□ -0.79
UPF3B-201ENST00000276201 BRD9Q9H8M2 597 aa10.1□□□□□ -0.79
UPF3B-201ENST00000276201 RMI1Q9H9A7 625 aa10.1□□□□□ -0.79
UPF3B-201ENST00000276201 NMUR1Q9HB89 426 aa10.1□□□□□ -0.79
UPF3B-201ENST00000276201 CCNB1IP1Q9NPC3 277 aa10.1□□□□□ -0.79
UPF3B-201ENST00000276201 LOC100130705A0A1B0GUX0 176 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 CLDN24A6NM45 220 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 M0R3G1 203 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 DFFAO00273 331 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 COCHO43405 550 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 PMPCBO75439 489 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 PRKD3O94806 890 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 MYO1DO94832 1006 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 PEX11BO96011 259 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 MT-CO1P00395 513 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 RETP07949 1114 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 LINC00032P0C843 101 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 EIF2DP41214 584 aaKnown RBP10.09□□□□□ -0.79
UPF3B-201ENST00000276201 CDH13P55290 713 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 UFM1P61960 85 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 TUBA1BP68363 451 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 SLC7A9P82251 487 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 ZXDBP98169 803 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 CD300CQ08708 224 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 KRR1Q13601 381 aaKnown RBP10.09□□□□□ -0.79
UPF3B-201ENST00000276201 TYSND1Q2T9J0 566 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 ZIK1Q3SY52 487 aaPredicted RBP10.09□□□□□ -0.79
UPF3B-201ENST00000276201 OTUD3Q5T2D3 398 aaPredicted RBP10.09□□□□□ -0.79
UPF3B-201ENST00000276201 ZNF549Q6P9A3 640 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 TUBA1AQ71U36 451 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 BTLAQ7Z6A9 289 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 SCD5Q86SK9 330 aa10.09□□□□□ -0.79
UPF3B-201ENST00000276201 YAF2Q8IY57 180 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms