RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 RAD9AQ99638 391 aa13.03□□□□□ -0.32
PRDM16-201ENST00000270722 WDPCPO95876 746 aa13.03□□□□□ -0.32
PRDM16-201ENST00000270722 IL7P13232 177 aa13.03□□□□□ -0.32
PRDM16-201ENST00000270722 GRM5P41594 1212 aa13.03□□□□□ -0.32
PRDM16-201ENST00000270722 NSG1P42857 185 aa13.03□□□□□ -0.32
PRDM16-201ENST00000270722 ALDH3B2P48448 385 aa13.03□□□□□ -0.32
PRDM16-201ENST00000270722 APLP1P51693 650 aa13.03□□□□□ -0.32
PRDM16-201ENST00000270722 ADNP2Q6IQ32 1131 aa13.03□□□□□ -0.32
PRDM16-201ENST00000270722 ARL9Q6T311 187 aa13.03□□□□□ -0.32
PRDM16-201ENST00000270722 CATSPERGQ6ZRH7 1159 aa13.03□□□□□ -0.32
PRDM16-201ENST00000270722 PIGZQ86VD9 579 aa13.03□□□□□ -0.32
PRDM16-201ENST00000270722 ZZZ3Q8IYH5 903 aa13.03□□□□□ -0.32
PRDM16-201ENST00000270722 DLGAP4Q9Y2H0 992 aa13.03□□□□□ -0.32
PRDM16-201ENST00000270722 CBY3A6NI87 242 aa13.02□□□□□ -0.32
PRDM16-201ENST00000270722 C12orf71A8MTZ7 269 aa13.02□□□□□ -0.32
PRDM16-201ENST00000270722 IRAK2O43187 625 aa13.02□□□□□ -0.32
PRDM16-201ENST00000270722 IFNA21P01568 189 aa13.02□□□□□ -0.32
PRDM16-201ENST00000270722 PGRP06401 933 aa13.02□□□□□ -0.32
PRDM16-201ENST00000270722 SERPINF1P36955 418 aa13.02□□□□□ -0.32
PRDM16-201ENST00000270722 NR4A3Q92570 626 aa13.02□□□□□ -0.32
PRDM16-201ENST00000270722 FAXDC2Q96IV6 333 aa13.02□□□□□ -0.32
PRDM16-201ENST00000270722 GRIA4P48058 902 aa13.02□□□□□ -0.32
PRDM16-201ENST00000270722 MED22Q15528 200 aa13.02□□□□□ -0.32
PRDM16-201ENST00000270722 PCK2Q16822 640 aa13.02□□□□□ -0.32
PRDM16-201ENST00000270722 KLHL22Q53GT1 634 aa13.02□□□□□ -0.32
PRDM16-201ENST00000270722 FAM151BQ6UXP7 276 aa13.02□□□□□ -0.32
PRDM16-201ENST00000270722 RAD9BQ6WBX8 426 aa13.02□□□□□ -0.32
PRDM16-201ENST00000270722 RASGRP3Q8IV61 690 aa13.02□□□□□ -0.32
PRDM16-201ENST00000270722 PLA2G15Q8NCC3 412 aa13.02□□□□□ -0.32
PRDM16-201ENST00000270722 COQ8BQ96D53 544 aa13.02□□□□□ -0.32
PRDM16-201ENST00000270722 GFM1Q96RP9 751 aaKnown RBP13.02□□□□□ -0.32
PRDM16-201ENST00000270722 RTKNQ9BST9 563 aa13.02□□□□□ -0.32
PRDM16-201ENST00000270722 DUSP11O75319 330 aaKnown RBP13.02□□□□□ -0.32
PRDM16-201ENST00000270722 MAFO75444 373 aaPredicted RBP13.02□□□□□ -0.32
PRDM16-201ENST00000270722 CAMKVQ8NCB2 501 aa13.02□□□□□ -0.32
PRDM16-201ENST00000270722 DNAAF1Q8NEP3 725 aa13.02□□□□□ -0.32
PRDM16-201ENST00000270722 LGR4Q9BXB1 951 aa13.02□□□□□ -0.32
PRDM16-201ENST00000270722 RPP40O75818 363 aaKnown RBP13.02□□□□□ -0.33
PRDM16-201ENST00000270722 ZNF37AP17032 561 aaPredicted RBP13.02□□□□□ -0.33
PRDM16-201ENST00000270722 GJB7Q6PEY0 223 aa13.02□□□□□ -0.33
PRDM16-201ENST00000270722 OR2T12Q8NG77 320 aa13.02□□□□□ -0.33
PRDM16-201ENST00000270722 LMLNQ96KR4 655 aa13.02□□□□□ -0.33
PRDM16-201ENST00000270722 MKKSQ9NPJ1 570 aaPredicted RBP13.02□□□□□ -0.33
PRDM16-201ENST00000270722 CEP152O94986 1710 aa13.02□□□□□ -0.33
PRDM16-201ENST00000270722 UROSP10746 265 aa13.02□□□□□ -0.33
PRDM16-201ENST00000270722 SEPHS1P49903 392 aa13.02□□□□□ -0.33
PRDM16-201ENST00000270722 PKNOX1P55347 436 aa13.02□□□□□ -0.33
PRDM16-201ENST00000270722 CCL23P55773 120 aa13.02□□□□□ -0.33
PRDM16-201ENST00000270722 RFTN1Q14699 578 aaPredicted RBP13.02□□□□□ -0.33
PRDM16-201ENST00000270722 UNC5AQ6ZN44 842 aa13.02□□□□□ -0.33
PRDM16-201ENST00000270722 NYAP1Q6ZVC0 841 aa13.02□□□□□ -0.33
PRDM16-201ENST00000270722 GALNTL5Q7Z4T8 443 aa13.02□□□□□ -0.33
PRDM16-201ENST00000270722 NPAS4Q8IUM7 802 aa13.02□□□□□ -0.33
PRDM16-201ENST00000270722 SLC44A3Q8N4M1 653 aa13.02□□□□□ -0.33
PRDM16-201ENST00000270722 ZNF431Q8TF32 576 aaPredicted RBP13.02□□□□□ -0.33
PRDM16-201ENST00000270722 SLIT1O75093 1534 aa13.02□□□□□ -0.33
PRDM16-201ENST00000270722 SHOXO15266 292 aa13.02□□□□□ -0.33
PRDM16-201ENST00000270722 PLATP00750 562 aa13.02□□□□□ -0.33
PRDM16-201ENST00000270722 PROCP04070 461 aa13.02□□□□□ -0.33
PRDM16-201ENST00000270722 IL7RP16871 459 aa13.02□□□□□ -0.33
PRDM16-201ENST00000270722 REEP5Q00765 189 aa13.02□□□□□ -0.33
PRDM16-201ENST00000270722 C10orf62Q5T681 223 aaPredicted RBP13.02□□□□□ -0.33
PRDM16-201ENST00000270722 DIRAS2Q96HU8 199 aa13.02□□□□□ -0.33
PRDM16-201ENST00000270722 SLC2A11Q9BYW1 496 aa13.02□□□□□ -0.33
PRDM16-201ENST00000270722 FGL1Q08830 312 aa13.02□□□□□ -0.33
PRDM16-201ENST00000270722 TPGS2Q68CL5 300 aa13.02□□□□□ -0.33
PRDM16-201ENST00000270722 SLC30A10Q6XR72 485 aa13.02□□□□□ -0.33
PRDM16-201ENST00000270722 CREB3L2Q70SY1 520 aa13.02□□□□□ -0.33
PRDM16-201ENST00000270722 CHST9Q7L1S5 443 aa13.02□□□□□ -0.33
PRDM16-201ENST00000270722 TICAM1Q8IUC6 712 aa13.02□□□□□ -0.33
PRDM16-201ENST00000270722 ARL6IP6Q8N6S5 226 aa13.02□□□□□ -0.33
PRDM16-201ENST00000270722 LPIN3Q9BQK8 851 aa13.02□□□□□ -0.33
PRDM16-201ENST00000270722 A8MX80 341 aa13.01□□□□□ -0.33
PRDM16-201ENST00000270722 BPNT1O95861 308 aa13.01□□□□□ -0.33
PRDM16-201ENST00000270722 ECHDC2Q86YB7 292 aa13.01□□□□□ -0.33
PRDM16-201ENST00000270722 ABCD2Q9UBJ2 740 aa13.01□□□□□ -0.33
PRDM16-201ENST00000270722 RHOQP17081 205 aa13.01□□□□□ -0.33
PRDM16-201ENST00000270722 RAB3BP20337 219 aa13.01□□□□□ -0.33
PRDM16-201ENST00000270722 FOXK1P85037 733 aa13.01□□□□□ -0.33
PRDM16-201ENST00000270722 RNF220Q5VTB9 566 aa13.01□□□□□ -0.33
PRDM16-201ENST00000270722 GTF2IRD2BQ6EKJ0 949 aa13.01□□□□□ -0.33
PRDM16-201ENST00000270722 GTF2IRD2Q86UP8 949 aa13.01□□□□□ -0.33
PRDM16-201ENST00000270722 GKN2Q86XP6 184 aa13.01□□□□□ -0.33
PRDM16-201ENST00000270722 ZNF347Q96SE7 839 aa13.01□□□□□ -0.33
PRDM16-201ENST00000270722 TM7SF2O76062 418 aa13.01□□□□□ -0.33
PRDM16-201ENST00000270722 VAMP1P23763 118 aa13.01□□□□□ -0.33
PRDM16-201ENST00000270722 PPP5CP53041 499 aa13.01□□□□□ -0.33
PRDM16-201ENST00000270722 RPA4Q13156 261 aa13.01□□□□□ -0.33
PRDM16-201ENST00000270722 SLC9A9Q8IVB4 645 aa13.01□□□□□ -0.33
PRDM16-201ENST00000270722 ZBTB2Q8N680 514 aa13.01□□□□□ -0.33
PRDM16-201ENST00000270722 C1GALT1C1Q96EU7 318 aa13.01□□□□□ -0.33
PRDM16-201ENST00000270722 SLC47A1Q96FL8 570 aa13.01□□□□□ -0.33
PRDM16-201ENST00000270722 ZNF223Q9UK11 482 aaPredicted RBP13.01□□□□□ -0.33
PRDM16-201ENST00000270722 LOXHD1Q8IVV2 1947 aa13.01□□□□□ -0.33
PRDM16-201ENST00000270722 CDK10Q15131 360 aa13.01□□□□□ -0.33
PRDM16-201ENST00000270722 PDGFRLQ15198 375 aa13.01□□□□□ -0.33
PRDM16-201ENST00000270722 PAOXQ6QHF9 649 aa13.01□□□□□ -0.33
PRDM16-201ENST00000270722 RBM23Q86U06 439 aaKnown RBP13.01□□□□□ -0.33
PRDM16-201ENST00000270722 TMEM161BQ8NDZ6 487 aa13.01□□□□□ -0.33
PRDM16-201ENST00000270722 OR52K1Q8NGK4 314 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms