RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 DERL2Q9GZP9 239 aa12.34□□□□□ -0.43
SS18-202ENST00000269138 KLHL25Q9H0H3 589 aa12.34□□□□□ -0.43
SS18-202ENST00000269138 SPATA7Q9P0W8 599 aa12.34□□□□□ -0.43
SS18-202ENST00000269138 CTNNAL1Q9UBT7 734 aa12.34□□□□□ -0.43
SS18-202ENST00000269138 ANGPTL2Q9UKU9 493 aa12.34□□□□□ -0.43
SS18-202ENST00000269138 SATB2Q9UPW6 733 aa12.34□□□□□ -0.43
SS18-202ENST00000269138 CCDC187A0A096LP49 1063 aa12.33□□□□□ -0.44
SS18-202ENST00000269138 A0A1W2PPV9 198 aa12.33□□□□□ -0.44
SS18-202ENST00000269138 ISM1B1AKI9 464 aa12.33□□□□□ -0.44
SS18-202ENST00000269138 PRICKLE3O43900 615 aaPredicted RBP12.33□□□□□ -0.44
SS18-202ENST00000269138 PRAMEF10O60809 474 aa12.33□□□□□ -0.44
SS18-202ENST00000269138 KRT38O76015 456 aa12.33□□□□□ -0.44
SS18-202ENST00000269138 ERGP11308 486 aa12.33□□□□□ -0.44
SS18-202ENST00000269138 PVRP15151 417 aa12.33□□□□□ -0.44
SS18-202ENST00000269138 CD1DP15813 335 aa12.33□□□□□ -0.44
SS18-202ENST00000269138 CYP2A7P20853 494 aa12.33□□□□□ -0.44
SS18-202ENST00000269138 PSMB5P28074 263 aa12.33□□□□□ -0.44
SS18-202ENST00000269138 TYK2P29597 1187 aa12.33□□□□□ -0.44
SS18-202ENST00000269138 ETV5P41161 510 aa12.33□□□□□ -0.44
SS18-202ENST00000269138 SLCO1A2P46721 670 aa12.33□□□□□ -0.44
SS18-202ENST00000269138 SERPINB8P50452 374 aa12.33□□□□□ -0.44
SS18-202ENST00000269138 PNLIPRP1P54315 467 aa12.33□□□□□ -0.44
SS18-202ENST00000269138 SP140Q13342 867 aa12.33□□□□□ -0.44
SS18-202ENST00000269138 TRA2AQ13595 282 aaKnown RBP eCLIP12.33□□□□□ -0.44
SS18-202ENST00000269138 TSNQ15631 228 aaKnown RBP12.33□□□□□ -0.44
SS18-202ENST00000269138 ANKS6Q68DC2 871 aa12.33□□□□□ -0.44
SS18-202ENST00000269138 PRSS42Q7Z5A4 293 aa12.33□□□□□ -0.44
SS18-202ENST00000269138 KCTD4Q8WVF5 259 aa12.33□□□□□ -0.44
SS18-202ENST00000269138 PTERQ96BW5 349 aa12.33□□□□□ -0.44
SS18-202ENST00000269138 NXNL1Q96CM4 212 aa12.33□□□□□ -0.44
SS18-202ENST00000269138 GRAMD1AQ96CP6 724 aa12.33□□□□□ -0.44
SS18-202ENST00000269138 PRR11Q96HE9 360 aaPredicted RBP12.33□□□□□ -0.44
SS18-202ENST00000269138 CCDC77Q9BR77 488 aa12.33□□□□□ -0.44
SS18-202ENST00000269138 IGSF5Q9NSI5 407 aa12.33□□□□□ -0.44
SS18-202ENST00000269138 OCIAD1Q9NX40 245 aa12.33□□□□□ -0.44
SS18-202ENST00000269138 UTP6Q9NYH9 597 aaKnown RBP12.33□□□□□ -0.44
SS18-202ENST00000269138 LNPEPQ9UIQ6 1025 aa12.33□□□□□ -0.44
SS18-202ENST00000269138 LOXL2Q9Y4K0 774 aa12.33□□□□□ -0.44
SS18-202ENST00000269138 KIF26BQ2KJY2 2108 aa12.33□□□□□ -0.44
SS18-202ENST00000269138 A0A096LPK6 155 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 TLCD2A6NGC4 264 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 SLC9B1P1A6NJY1 282 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 SMIM23A6NLE4 172 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 FOXO6A8MYZ6 492 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 HGSO14964 777 aaPredicted RBP12.32□□□□□ -0.44
SS18-202ENST00000269138 SNRPAP09012 282 aaKnown RBP12.32□□□□□ -0.44
SS18-202ENST00000269138 ANKRD34CP0C6C1 535 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 ITIH1P19827 911 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 CDH3P22223 829 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 CNTFP26441 200 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 IMPA1P29218 277 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 CSTF2P33240 577 aaKnown RBP eCLIP12.32□□□□□ -0.44
SS18-202ENST00000269138 MAGEA12P43365 314 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 KCNC1P48547 511 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 YBX1P67809 324 aaKnown RBP12.32□□□□□ -0.44
SS18-202ENST00000269138 GABREP78334 506 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 TSTA3Q13630 321 aaPredicted RBP12.32□□□□□ -0.44
SS18-202ENST00000269138 KIR2DS3Q14952 304 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 OR4D1Q15615 310 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 PPP1R3AQ16821 1122 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 ZXDCQ2QGD7 858 aaPredicted RBP12.32□□□□□ -0.44
SS18-202ENST00000269138 SPESP1Q6UW49 350 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 SUSD1Q6UWL2 747 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 TAOK1Q7L7X3 1001 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 LRRC56Q8IYG6 542 aaPredicted RBP12.32□□□□□ -0.44
SS18-202ENST00000269138 CENPLQ8N0S6 344 aaPredicted RBP12.32□□□□□ -0.44
SS18-202ENST00000269138 FBXO39Q8N4B4 442 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 WDR36Q8NI36 951 aaKnown RBP12.32□□□□□ -0.44
SS18-202ENST00000269138 HMGCLL1Q8TB92 370 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 EPS8L3Q8TE67 593 aaKnown RBP12.32□□□□□ -0.44
SS18-202ENST00000269138 KLHL6Q8WZ60 621 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 ANKRD7Q92527 254 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 ISL2Q96A47 359 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 CCDC138Q96M89 665 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 CD180Q99467 661 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 RAB11FIP5Q9BXF6 653 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 VPS11Q9H270 941 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 ZNF768Q9H5H4 540 aaKnown RBP12.32□□□□□ -0.44
SS18-202ENST00000269138 SEMA5BQ9P283 1151 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 STOX2Q9P2F5 926 aaPredicted RBP12.32□□□□□ -0.44
SS18-202ENST00000269138 FETUBQ9UGM5 382 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 TBK1Q9UHD2 729 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 TLK1Q9UKI8 766 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 KLHL20Q9Y2M5 609 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 ACOT9Q9Y305 439 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 A0A087X1B8 175 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 EFCAB7A8K855 629 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 E7ENX8 843 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 MATN2O00339 956 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 PLD2O14939 933 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 RFPL1O75677 317 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 KRT37O76014 449 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 GUCA1CO95843 209 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 TUBBP07437 444 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 LTA4HP09960 611 aaKnown RBP12.32□□□□□ -0.44
SS18-202ENST00000269138 FGF3P11487 239 aaPredicted RBP12.32□□□□□ -0.44
SS18-202ENST00000269138 ST6GAL1P15907 406 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 SH3BP2P78314 561 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 TAP2Q03519 686 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 KCNAB1Q14722 419 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms