RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 NEK2P51955 445 aa13.61□□□□□ -0.23
CDH1-201ENST00000261769 TOP3AQ13472 1001 aaPredicted RBP13.61□□□□□ -0.23
CDH1-201ENST00000261769 DPYSQ14117 519 aa13.61□□□□□ -0.23
CDH1-201ENST00000261769 ZNF572Q7Z3I7 529 aaPredicted RBP13.61□□□□□ -0.23
CDH1-201ENST00000261769 SCD5Q86SK9 330 aa13.61□□□□□ -0.23
CDH1-201ENST00000261769 TMEM156Q8N614 296 aa13.61□□□□□ -0.23
CDH1-201ENST00000261769 ZSCAN1Q8NBB4 408 aa13.61□□□□□ -0.23
CDH1-201ENST00000261769 MAGEE2Q8TD90 523 aaPredicted RBP13.61□□□□□ -0.23
CDH1-201ENST00000261769 PNO1Q9NRX1 252 aaKnown RBP13.61□□□□□ -0.23
CDH1-201ENST00000261769 ZCCHC3Q9NUD5 404 aaKnown RBP13.61□□□□□ -0.23
CDH1-201ENST00000261769 CYTH4Q9UIA0 394 aa13.61□□□□□ -0.23
CDH1-201ENST00000261769 LINC01553A4QN01 128 aa13.61□□□□□ -0.23
CDH1-201ENST00000261769 CAPN8A6NHC0 703 aa13.61□□□□□ -0.23
CDH1-201ENST00000261769 MAFKO60675 156 aa13.61□□□□□ -0.23
CDH1-201ENST00000261769 TGFB1P01137 390 aa13.61□□□□□ -0.23
CDH1-201ENST00000261769 C6P13671 934 aa13.61□□□□□ -0.23
CDH1-201ENST00000261769 HOXC12P31275 282 aa13.61□□□□□ -0.23
CDH1-201ENST00000261769 HOXC13P31276 330 aa13.61□□□□□ -0.23
CDH1-201ENST00000261769 ARHGAP8P85298 464 aa13.61□□□□□ -0.23
CDH1-201ENST00000261769 DSC1Q08554 894 aa13.61□□□□□ -0.23
CDH1-201ENST00000261769 KCTD19Q17RG1 926 aaPredicted RBP13.61□□□□□ -0.23
CDH1-201ENST00000261769 TIMM50Q3ZCQ8 353 aa13.61□□□□□ -0.23
CDH1-201ENST00000261769 GK5Q6ZS86 529 aa13.61□□□□□ -0.23
CDH1-201ENST00000261769 NEK10Q6ZWH5 1172 aa13.61□□□□□ -0.23
CDH1-201ENST00000261769 VN1R2Q8NFZ6 395 aa13.61□□□□□ -0.23
CDH1-201ENST00000261769 PNPT1Q8TCS8 783 aaKnown RBP13.61□□□□□ -0.23
CDH1-201ENST00000261769 SLC38A4Q969I6 547 aa13.61□□□□□ -0.23
CDH1-201ENST00000261769 GMPPBQ9Y5P6 360 aa13.61□□□□□ -0.23
CDH1-201ENST00000261769 MYH14Q7Z406 1995 aaKnown RBP13.61□□□□□ -0.23
CDH1-201ENST00000261769 A0A1W2PRB8 838 aa13.61□□□□□ -0.23
CDH1-201ENST00000261769 AQP1P29972 269 aa13.61□□□□□ -0.23
CDH1-201ENST00000261769 ITGA1P56199 1179 aa13.61□□□□□ -0.23
CDH1-201ENST00000261769 PTCHD3Q3KNS1 767 aa13.61□□□□□ -0.23
CDH1-201ENST00000261769 POMZP3Q6PJE2 187 aa13.61□□□□□ -0.23
CDH1-201ENST00000261769 ZNF730Q6ZMV8 503 aa13.61□□□□□ -0.23
CDH1-201ENST00000261769 TBC1D21Q8IYX1 336 aa13.61□□□□□ -0.23
CDH1-201ENST00000261769 C3orf58Q8NDZ4 430 aa13.61□□□□□ -0.23
CDH1-201ENST00000261769 EEF1AKMT1Q8WVE0 214 aa13.61□□□□□ -0.23
CDH1-201ENST00000261769 ZNF354BQ96LW1 612 aa13.61□□□□□ -0.23
CDH1-201ENST00000261769 SLC46A2Q9BY10 475 aa13.61□□□□□ -0.23
CDH1-201ENST00000261769 PDE7BQ9NP56 450 aa13.61□□□□□ -0.23
CDH1-201ENST00000261769 TCEA3O75764 348 aa13.6□□□□□ -0.23
CDH1-201ENST00000261769 MFN2O95140 757 aa13.6□□□□□ -0.23
CDH1-201ENST00000261769 ADRB3P13945 408 aa13.6□□□□□ -0.23
CDH1-201ENST00000261769 POLR2CP19387 275 aaPredicted RBP13.6□□□□□ -0.23
CDH1-201ENST00000261769 HNRNPA2B1P22626 353 aaKnown RBP13.6□□□□□ -0.23
CDH1-201ENST00000261769 RYKP34925 604 aa13.6□□□□□ -0.23
CDH1-201ENST00000261769 ERVK-8P63133 956 aa13.6□□□□□ -0.23
CDH1-201ENST00000261769 HKDC1Q2TB90 917 aa13.6□□□□□ -0.23
CDH1-201ENST00000261769 EIPR1Q53HC9 387 aa13.6□□□□□ -0.23
CDH1-201ENST00000261769 TAS1R1Q7RTX1 841 aa13.6□□□□□ -0.23
CDH1-201ENST00000261769 KIAA1191Q96A73 305 aa13.6□□□□□ -0.23
CDH1-201ENST00000261769 COQ9O75208 318 aa13.6□□□□□ -0.23
CDH1-201ENST00000261769 SAGP10523 405 aaPredicted RBP13.6□□□□□ -0.23
CDH1-201ENST00000261769 NCBP2P52298 156 aaKnown RBP eCLIP13.6□□□□□ -0.23
CDH1-201ENST00000261769 GSCP56915 257 aaPredicted RBP13.6□□□□□ -0.23
CDH1-201ENST00000261769 ALKBH2Q6NS38 261 aa13.6□□□□□ -0.23
CDH1-201ENST00000261769 ZDHHC14Q8IZN3 488 aa13.6□□□□□ -0.23
CDH1-201ENST00000261769 VANGL1Q8TAA9 524 aaPredicted RBP13.6□□□□□ -0.23
CDH1-201ENST00000261769 NPAS2Q99743 824 aa13.6□□□□□ -0.23
CDH1-201ENST00000261769 KLF16Q9BXK1 252 aaPredicted RBP13.6□□□□□ -0.23
CDH1-201ENST00000261769 TBL1XR1Q9BZK7 514 aa13.6□□□□□ -0.23
CDH1-201ENST00000261769 SEMA6AQ9H2E6 1030 aa13.6□□□□□ -0.23
CDH1-201ENST00000261769 FANCFQ9NPI8 374 aa13.6□□□□□ -0.23
CDH1-201ENST00000261769 IKZF3Q9UKT9 509 aa13.6□□□□□ -0.23
CDH1-201ENST00000261769 PPM1HQ9ULR3 514 aa13.6□□□□□ -0.23
CDH1-201ENST00000261769 CAB39Q9Y376 341 aaPredicted RBP13.6□□□□□ -0.23
CDH1-201ENST00000261769 TEX264Q9Y6I9 313 aa13.6□□□□□ -0.23
CDH1-201ENST00000261769 A0A0G2JN53 185 aa13.6□□□□□ -0.23
CDH1-201ENST00000261769 CLPTM1O96005 669 aa13.6□□□□□ -0.23
CDH1-201ENST00000261769 ALOX5P09917 674 aa13.6□□□□□ -0.23
CDH1-201ENST00000261769 CD247P20963 164 aa13.6□□□□□ -0.23
CDH1-201ENST00000261769 BTN3A2P78410 334 aa13.6□□□□□ -0.23
CDH1-201ENST00000261769 AP1ARQ63HQ0 302 aa13.6□□□□□ -0.23
CDH1-201ENST00000261769 OXR1Q8N573 874 aa13.6□□□□□ -0.23
CDH1-201ENST00000261769 PMEPA1Q969W9 287 aa13.6□□□□□ -0.23
CDH1-201ENST00000261769 NOL6Q9H6R4 1146 aaKnown RBP13.6□□□□□ -0.23
CDH1-201ENST00000261769 ZC4H2Q9NQZ6 224 aa13.6□□□□□ -0.23
CDH1-201ENST00000261769 MOCS1Q9NZB8 636 aa13.6□□□□□ -0.23
CDH1-201ENST00000261769 CNOT6Q9ULM6 557 aaKnown RBP13.6□□□□□ -0.23
CDH1-201ENST00000261769 THEGLP0DJG4 465 aa13.59□□□□□ -0.23
CDH1-201ENST00000261769 SRCP12931 536 aa13.59□□□□□ -0.23
CDH1-201ENST00000261769 IL7RP16871 459 aa13.59□□□□□ -0.23
CDH1-201ENST00000261769 HNRNPA1L2Q32P51 320 aaKnown RBP13.59□□□□□ -0.23
CDH1-201ENST00000261769 TOR1AIP1Q5JTV8 583 aa13.59□□□□□ -0.23
CDH1-201ENST00000261769 GLYATQ6IB77 296 aa13.59□□□□□ -0.23
CDH1-201ENST00000261769 NCEH1Q6PIU2 408 aa13.59□□□□□ -0.23
CDH1-201ENST00000261769 ZDHHC24Q6UX98 284 aa13.59□□□□□ -0.23
CDH1-201ENST00000261769 SLC30A8Q8IWU4 369 aa13.59□□□□□ -0.23
CDH1-201ENST00000261769 SLC47A1Q96FL8 570 aa13.59□□□□□ -0.23
CDH1-201ENST00000261769 TBC1D23Q9NUY8 699 aa13.59□□□□□ -0.23
CDH1-201ENST00000261769 SH3GLB1Q9Y371 365 aa13.59□□□□□ -0.23
CDH1-201ENST00000261769 DHRS7Q9Y394 339 aa13.59□□□□□ -0.23
CDH1-201ENST00000261769 SOBPA7XYQ1 873 aa13.59□□□□□ -0.23
CDH1-201ENST00000261769 SLC16A5O15375 505 aa13.59□□□□□ -0.23
CDH1-201ENST00000261769 SEC24AO95486 1093 aa13.59□□□□□ -0.23
CDH1-201ENST00000261769 PRKCHP24723 683 aa13.59□□□□□ -0.23
CDH1-201ENST00000261769 PIK3CBP42338 1070 aa13.59□□□□□ -0.23
CDH1-201ENST00000261769 ABATP80404 500 aa13.59□□□□□ -0.23
CDH1-201ENST00000261769 MRPL28Q13084 256 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms