RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 AGTR2P50052 363 aa15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 RAB28P51157 221 aa15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 ALDH18A1P54886 795 aaKnown RBP15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 BIRC2Q13490 618 aa15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 FASTKQ14296 549 aaKnown RBP15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 PLCL1Q15111 1095 aa15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 NR0B2Q15466 257 aa15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 INAVAQ3KP66 663 aa15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 SULT1C3Q6IMI6 304 aa15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 AGTRAPQ6RW13 159 aa15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 C10orf107Q8IVU9 208 aa15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 LRRC56Q8IYG6 542 aaPredicted RBP15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 C2orf73Q8N5S3 287 aaPredicted RBP15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 PTGR2Q8N8N7 351 aaPredicted RBP15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 LINC01555Q8NAE3 123 aa15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 PPFIBP2Q8ND30 876 aa15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 OR4E2Q8NGC2 313 aa15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 LCN9Q8WX39 176 aa15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 TBC1D10AQ9BXI6 508 aa15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 ATG10Q9H0Y0 220 aa15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 UCK1Q9HA47 277 aa15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 NKIRAS1Q9NYS0 192 aa15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 ASB1Q9Y576 335 aa15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 RHPN2P1A8MT19 583 aa15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 E7ENX8 843 aa15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 SH3BP5O60239 455 aa15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 IPO13O94829 963 aaKnown RBP15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 SIX3O95343 332 aaPredicted RBP15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 S100BP04271 92 aaPredicted RBP15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 ALDH3A1P30838 453 aa15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 SERPINB4P48594 390 aa15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 HNMTP50135 292 aa15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 PNLIPRP1P54315 467 aa15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 NFKB2Q00653 900 aa15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 TAP2Q03519 686 aa15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 ARHGAP19Q14CB8 494 aa15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 SETDB1Q15047 1291 aa15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 CYP2A13Q16696 494 aa15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 GUSBP11Q6P575 273 aa15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 ZNF771Q7L3S4 317 aaPredicted RBP15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 ZNF438Q7Z4V0 828 aa15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 AMIGO1Q86WK6 493 aa15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 SYTL1Q8IYJ3 562 aa15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 RHBDD1Q8TEB9 315 aa15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 SETD7Q8WTS6 366 aaKnown RBP15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 SH3KBP1Q96B97 665 aa15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 SRMSQ9H3Y6 488 aa15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 WWOXQ9NZC7 414 aa15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 NCKIPSDQ9NZQ3 722 aa15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 LNPEPQ9UIQ6 1025 aa15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 MID2Q9UJV3 735 aa15.32■□□□□ 0.04
CCDC90B-201ENST00000260054 EME2A4GXA9 379 aaPredicted RBP15.31■□□□□ 0.04
CCDC90B-201ENST00000260054 LRRC14BA6NHZ5 514 aa15.31■□□□□ 0.04
CCDC90B-201ENST00000260054 LILRA5A6NI73 299 aa15.31■□□□□ 0.04
CCDC90B-201ENST00000260054 KDM1AO60341 852 aa15.31■□□□□ 0.04
CCDC90B-201ENST00000260054 BPGMP07738 259 aa15.31■□□□□ 0.04
CCDC90B-201ENST00000260054 CKMT1AP12532 417 aa15.31■□□□□ 0.04
CCDC90B-201ENST00000260054 CHN1P15882 459 aa15.31■□□□□ 0.04
CCDC90B-201ENST00000260054 SHMT2P34897 504 aa15.31■□□□□ 0.04
CCDC90B-201ENST00000260054 GGT5P36269 586 aa15.31■□□□□ 0.04
CCDC90B-201ENST00000260054 GDF5P43026 501 aa15.31■□□□□ 0.04
CCDC90B-201ENST00000260054 HSPA7P48741 367 aa15.31■□□□□ 0.04
CCDC90B-201ENST00000260054 PTCHD3Q3KNS1 767 aa15.31■□□□□ 0.04
CCDC90B-201ENST00000260054 STPG1Q5TH74 334 aa15.31■□□□□ 0.04
CCDC90B-201ENST00000260054 ANKS6Q68DC2 871 aa15.31■□□□□ 0.04
CCDC90B-201ENST00000260054 TAX1BP1Q86VP1 789 aa15.31■□□□□ 0.04
CCDC90B-201ENST00000260054 NAXDQ8IW45 347 aa15.31■□□□□ 0.04
CCDC90B-201ENST00000260054 TCAIMQ8N3R3 496 aa15.31■□□□□ 0.04
CCDC90B-201ENST00000260054 OR2L8Q8NGY9 312 aa15.31■□□□□ 0.04
CCDC90B-201ENST00000260054 ATL1Q8WXF7 558 aa15.31■□□□□ 0.04
CCDC90B-201ENST00000260054 PYCR2Q96C36 320 aa15.31■□□□□ 0.04
CCDC90B-201ENST00000260054 SLC38A3Q99624 504 aa15.31■□□□□ 0.04
CCDC90B-201ENST00000260054 PAIP2Q9BPZ3 127 aaKnown RBP15.31■□□□□ 0.04
CCDC90B-201ENST00000260054 RAB11FIP5Q9BXF6 653 aa15.31■□□□□ 0.04
CCDC90B-201ENST00000260054 ACSS2Q9NR19 701 aa15.31■□□□□ 0.04
CCDC90B-201ENST00000260054 OXSMQ9NWU1 459 aa15.31■□□□□ 0.04
CCDC90B-201ENST00000260054 TMCO1Q9UM00 188 aa15.31■□□□□ 0.04
CCDC90B-201ENST00000260054 ZNF292O60281 2723 aa15.3■□□□□ 0.04
CCDC90B-201ENST00000260054 CPED1A4D0V7 1026 aa15.3■□□□□ 0.04
CCDC90B-201ENST00000260054 WDR91A4D1P6 747 aa15.3■□□□□ 0.04
CCDC90B-201ENST00000260054 STX16-NPEPL1H3BU86 382 aa15.3■□□□□ 0.04
CCDC90B-201ENST00000260054 BTN3A3O00478 584 aa15.3■□□□□ 0.04
CCDC90B-201ENST00000260054 STX16O14662 325 aa15.3■□□□□ 0.04
CCDC90B-201ENST00000260054 OAS2P29728 719 aaKnown RBP15.3■□□□□ 0.04
CCDC90B-201ENST00000260054 HSD17B2P37059 387 aa15.3■□□□□ 0.04
CCDC90B-201ENST00000260054 SLC6A12P48065 614 aa15.3■□□□□ 0.04
CCDC90B-201ENST00000260054 ATP1A2P50993 1020 aa15.3■□□□□ 0.04
CCDC90B-201ENST00000260054 PRKAA2P54646 552 aa15.3■□□□□ 0.04
CCDC90B-201ENST00000260054 TBPL1P62380 186 aa15.3■□□□□ 0.04
CCDC90B-201ENST00000260054 NAE1Q13564 534 aa15.3■□□□□ 0.04
CCDC90B-201ENST00000260054 NR1D2Q14995 579 aa15.3■□□□□ 0.04
CCDC90B-201ENST00000260054 HHATQ5VTY9 493 aa15.3■□□□□ 0.04
CCDC90B-201ENST00000260054 SUSD1Q6UWL2 747 aa15.3■□□□□ 0.04
CCDC90B-201ENST00000260054 ADGRF3Q8IZF5 1079 aa15.3■□□□□ 0.04
CCDC90B-201ENST00000260054 RAB42Q8N4Z0 105 aa15.3■□□□□ 0.04
CCDC90B-201ENST00000260054 OR56A3Q8NH54 315 aa15.3■□□□□ 0.04
CCDC90B-201ENST00000260054 HMGCLL1Q8TB92 370 aa15.3■□□□□ 0.04
CCDC90B-201ENST00000260054 UBTD2Q8WUN7 234 aa15.3■□□□□ 0.04
CCDC90B-201ENST00000260054 CCDC74AQ96AQ1 378 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms