RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 TMEFF2Q9UIK5 374 aaPredicted RBP14.87□□□□□ -0.03
DDX56-201ENST00000258772 U3KQV3 271 aa14.87□□□□□ -0.03
DDX56-201ENST00000258772 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.87□□□□□ -0.03
DDX56-201ENST00000258772 GFRA2O00451 464 aa14.87□□□□□ -0.03
DDX56-201ENST00000258772 SLC16A6O15403 523 aa14.87□□□□□ -0.03
DDX56-201ENST00000258772 GREM1O60565 184 aa14.87□□□□□ -0.03
DDX56-201ENST00000258772 CBFA2T3O75081 653 aa14.87□□□□□ -0.03
DDX56-201ENST00000258772 CLPXO76031 633 aa14.87□□□□□ -0.03
DDX56-201ENST00000258772 RECQL5O94762 991 aaPredicted RBP14.87□□□□□ -0.03
DDX56-201ENST00000258772 LATS1O95835 1130 aa14.87□□□□□ -0.03
DDX56-201ENST00000258772 PFKLP17858 780 aa14.87□□□□□ -0.03
DDX56-201ENST00000258772 ALDH7A1P49419 539 aaKnown RBP14.87□□□□□ -0.03
DDX56-201ENST00000258772 KIAA1841Q6NSI8 718 aa14.87□□□□□ -0.03
DDX56-201ENST00000258772 C16orf87Q6PH81 154 aa14.87□□□□□ -0.03
DDX56-201ENST00000258772 ANKRD46Q86W74 232 aa14.87□□□□□ -0.03
DDX56-201ENST00000258772 HIPK1Q86Z02 1210 aa14.87□□□□□ -0.03
DDX56-201ENST00000258772 CHPFQ8IZ52 775 aa14.87□□□□□ -0.03
DDX56-201ENST00000258772 TRUB1Q8WWH5 349 aaKnown RBP14.87□□□□□ -0.03
DDX56-201ENST00000258772 SELENOMQ8WWX9 145 aa14.87□□□□□ -0.03
DDX56-201ENST00000258772 POP5Q969H6 163 aaKnown RBP14.87□□□□□ -0.03
DDX56-201ENST00000258772 ITCHQ96J02 903 aa14.87□□□□□ -0.03
DDX56-201ENST00000258772 COX4I2Q96KJ9 171 aa14.87□□□□□ -0.03
DDX56-201ENST00000258772 INPP5KQ9BT40 448 aa14.87□□□□□ -0.03
DDX56-201ENST00000258772 C2orf49Q9BVC5 232 aaPredicted RBP14.87□□□□□ -0.03
DDX56-201ENST00000258772 FUNDC2Q9BWH2 189 aa14.87□□□□□ -0.03
DDX56-201ENST00000258772 KCTD5Q9NXV2 234 aa14.87□□□□□ -0.03
DDX56-201ENST00000258772 WARS2Q9UGM6 360 aaKnown RBP14.87□□□□□ -0.03
DDX56-201ENST00000258772 MICAL3Q7RTP6 2002 aa14.86□□□□□ -0.03
DDX56-201ENST00000258772 AGAP14A8MT82 685 aa14.86□□□□□ -0.03
DDX56-201ENST00000258772 SLC1A7O00341 560 aa14.86□□□□□ -0.03
DDX56-201ENST00000258772 PER2O15055 1255 aa14.86□□□□□ -0.03
DDX56-201ENST00000258772 PRPS2P11908 318 aa14.86□□□□□ -0.03
DDX56-201ENST00000258772 MYCLP1P12525 358 aaPredicted RBP14.86□□□□□ -0.03
DDX56-201ENST00000258772 HOXB9P17482 250 aaPredicted RBP14.86□□□□□ -0.03
DDX56-201ENST00000258772 HOXB6P17509 224 aaKnown RBP14.86□□□□□ -0.03
DDX56-201ENST00000258772 PTPN6P29350 595 aa14.86□□□□□ -0.03
DDX56-201ENST00000258772 RYKP34925 604 aa14.86□□□□□ -0.03
DDX56-201ENST00000258772 NSG1P42857 185 aa14.86□□□□□ -0.03
DDX56-201ENST00000258772 ZXDBP98169 803 aa14.86□□□□□ -0.03
DDX56-201ENST00000258772 RFX4Q33E94 735 aa14.86□□□□□ -0.03
DDX56-201ENST00000258772 ZC3H12BQ5HYM0 836 aaKnown RBP14.86□□□□□ -0.03
DDX56-201ENST00000258772 CES5AQ6NT32 575 aa14.86□□□□□ -0.03
DDX56-201ENST00000258772 TMEM150AQ86TG1 271 aa14.86□□□□□ -0.03
DDX56-201ENST00000258772 TSPAN33Q86UF1 283 aa14.86□□□□□ -0.03
DDX56-201ENST00000258772 SLC15A4Q8N697 577 aa14.86□□□□□ -0.03
DDX56-201ENST00000258772 GPR26Q8NDV2 337 aa14.86□□□□□ -0.03
DDX56-201ENST00000258772 OR10Q1Q8NGQ4 319 aa14.86□□□□□ -0.03
DDX56-201ENST00000258772 ADAMTS19Q8TE59 1207 aa14.86□□□□□ -0.03
DDX56-201ENST00000258772 MUL1Q969V5 352 aa14.86□□□□□ -0.03
DDX56-201ENST00000258772 RAD21L1Q9H4I0 556 aa14.86□□□□□ -0.03
DDX56-201ENST00000258772 RMND5AQ9H871 391 aa14.86□□□□□ -0.03
DDX56-201ENST00000258772 NMRK2Q9NPI5 230 aa14.86□□□□□ -0.03
DDX56-201ENST00000258772 ARL15Q9NXU5 204 aa14.86□□□□□ -0.03
DDX56-201ENST00000258772 BAG5Q9UL15 447 aa14.86□□□□□ -0.03
DDX56-201ENST00000258772 YIPF1Q9Y548 306 aa14.86□□□□□ -0.03
DDX56-201ENST00000258772 CORINQ9Y5Q5 1042 aa14.86□□□□□ -0.03
DDX56-201ENST00000258772 SNX5Q9Y5X3 404 aa14.86□□□□□ -0.03
DDX56-201ENST00000258772 PTGES3LE9PB15 166 aa14.86□□□□□ -0.03
DDX56-201ENST00000258772 J3QRK9 145 aa14.86□□□□□ -0.03
DDX56-201ENST00000258772 SOCS5O75159 536 aa14.86□□□□□ -0.03
DDX56-201ENST00000258772 CBSLP0DN79 551 aa14.86□□□□□ -0.03
DDX56-201ENST00000258772 PCMT1P22061 227 aa14.86□□□□□ -0.03
DDX56-201ENST00000258772 TACR1P25103 407 aa14.86□□□□□ -0.03
DDX56-201ENST00000258772 CBSP35520 551 aa14.86□□□□□ -0.03
DDX56-201ENST00000258772 PPP3CCP48454 512 aa14.86□□□□□ -0.03
DDX56-201ENST00000258772 CSNK1DP48730 415 aa14.86□□□□□ -0.03
DDX56-201ENST00000258772 RAD23AP54725 363 aa14.86□□□□□ -0.03
DDX56-201ENST00000258772 ABHD18Q0P651 414 aa14.86□□□□□ -0.03
DDX56-201ENST00000258772 SPIDRQ14159 915 aa14.86□□□□□ -0.03
DDX56-201ENST00000258772 ZXDCQ2QGD7 858 aaPredicted RBP14.86□□□□□ -0.03
DDX56-201ENST00000258772 CDKL4Q5MAI5 379 aa14.86□□□□□ -0.03
DDX56-201ENST00000258772 GALNT18Q6P9A2 607 aa14.86□□□□□ -0.03
DDX56-201ENST00000258772 CRTC3Q6UUV7 619 aa14.86□□□□□ -0.03
DDX56-201ENST00000258772 DCDC5Q6ZRR9 648 aa14.86□□□□□ -0.03
DDX56-201ENST00000258772 TPGS1Q6ZTW0 290 aa14.86□□□□□ -0.03
DDX56-201ENST00000258772 BEND7Q8N7W2 519 aaPredicted RBP14.86□□□□□ -0.03
DDX56-201ENST00000258772 FBXL8Q96CD0 374 aa14.86□□□□□ -0.03
DDX56-201ENST00000258772 REXO5Q96IC2 774 aaKnown RBP14.86□□□□□ -0.03
DDX56-201ENST00000258772 TSSK3Q96PN8 268 aa14.86□□□□□ -0.03
DDX56-201ENST00000258772 NODALQ96S42 347 aa14.86□□□□□ -0.03
DDX56-201ENST00000258772 DGCR6LQ9BY27 220 aa14.86□□□□□ -0.03
DDX56-201ENST00000258772 PALMDQ9NP74 551 aa14.86□□□□□ -0.03
DDX56-201ENST00000258772 PAK1IP1Q9NWT1 392 aaPredicted RBP14.86□□□□□ -0.03
DDX56-201ENST00000258772 NAALAD2Q9Y3Q0 740 aa14.86□□□□□ -0.03
DDX56-201ENST00000258772 ORC6Q9Y5N6 252 aa14.86□□□□□ -0.03
DDX56-201ENST00000258772 WNT9AO14904 365 aa14.85□□□□□ -0.03
DDX56-201ENST00000258772 BCAS1O75363 584 aaPredicted RBP14.85□□□□□ -0.03
DDX56-201ENST00000258772 B3GALT4O96024 378 aa14.85□□□□□ -0.03
DDX56-201ENST00000258772 ITIH1P19827 911 aa14.85□□□□□ -0.03
DDX56-201ENST00000258772 HTR1BP28222 390 aa14.85□□□□□ -0.03
DDX56-201ENST00000258772 CDKN2CP42773 168 aa14.85□□□□□ -0.03
DDX56-201ENST00000258772 MAPK8P45983 427 aa14.85□□□□□ -0.03
DDX56-201ENST00000258772 NEK2P51955 445 aa14.85□□□□□ -0.03
DDX56-201ENST00000258772 MLLT10P55197 1068 aa14.85□□□□□ -0.03
DDX56-201ENST00000258772 CDK5R2Q13319 367 aa14.85□□□□□ -0.03
DDX56-201ENST00000258772 IL18R1Q13478 541 aa14.85□□□□□ -0.03
DDX56-201ENST00000258772 AQP6Q13520 282 aa14.85□□□□□ -0.03
DDX56-201ENST00000258772 TTC23LQ6PF05 361 aa14.85□□□□□ -0.03
DDX56-201ENST00000258772 SLC16A12Q6ZSM3 486 aa14.85□□□□□ -0.03
DDX56-201ENST00000258772 DNAJB7Q7Z6W7 309 aaPredicted RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms