RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 AURKCQ9UQB9 309 aa7.59□□□□□ -1.19
GPNMB-201ENST00000258733 AAR2Q9Y312 384 aaKnown RBP7.59□□□□□ -1.19
GPNMB-201ENST00000258733 TCAF1Q9Y4C2 921 aa7.59□□□□□ -1.19
GPNMB-201ENST00000258733 NID2Q14112 1375 aa7.59□□□□□ -1.19
GPNMB-201ENST00000258733 USP31Q70CQ4 1352 aa7.59□□□□□ -1.19
GPNMB-201ENST00000258733 BTBD17A6NE02 478 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 PHYHO14832 338 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 TRIM24O15164 1050 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 STX11O75558 287 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 SPDEFO95238 335 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 GDF11O95390 407 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 CBX7O95931 251 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 JUNP05412 331 aaKnown RBP7.58□□□□□ -1.2
GPNMB-201ENST00000258733 ADRB2P07550 413 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 RNH1P13489 461 aaKnown RBP7.58□□□□□ -1.2
GPNMB-201ENST00000258733 PAICSP22234 425 aaKnown RBP7.58□□□□□ -1.2
GPNMB-201ENST00000258733 TUBG1P23258 451 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 TLX1P31314 330 aaPredicted RBP7.58□□□□□ -1.2
GPNMB-201ENST00000258733 DPP6P42658 865 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 KLRC3Q07444 240 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 CHIT1Q13231 466 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 ILKQ13418 452 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 SLC12A1Q13621 1099 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 SNTB1Q13884 538 aaKnown RBP7.58□□□□□ -1.2
GPNMB-201ENST00000258733 TRAM1Q15629 374 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 CLLU1Q5K131 121 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 TMEM164Q5U3C3 297 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 KIAA0319Q5VV43 1072 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 GPR153Q6NV75 609 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 TRILQ7L0X0 811 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 OVCH2Q7RTZ1 564 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 ZC3HC1Q86WB0 502 aaKnown RBP7.58□□□□□ -1.2
GPNMB-201ENST00000258733 OR6Q1Q8NGQ2 317 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 OR2L8Q8NGY9 312 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 SHKBP1Q8TBC3 707 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 IP6K1Q92551 441 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 DLG3Q92796 817 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 ELMO3Q96BJ8 720 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 ZFP42Q96MM3 310 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 GLT1D1Q96MS3 346 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 SPSB2Q99619 263 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 SEBOXQ9HB31 216 aaPredicted RBP7.58□□□□□ -1.2
GPNMB-201ENST00000258733 ZNF334Q9HCZ1 680 aaPredicted RBP7.58□□□□□ -1.2
GPNMB-201ENST00000258733 TUBG2Q9NRH3 451 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 XPR1Q9UBH6 696 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 GHRLQ9UBU3 117 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 MINPP1Q9UNW1 487 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 SHOC2Q9UQ13 582 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 PUS1Q9Y606 427 aaKnown RBP eCLIP7.58□□□□□ -1.2
GPNMB-201ENST00000258733 RNF215Q9Y6U7 377 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 SF3B1O75533 1304 aaKnown RBP eCLIP7.58□□□□□ -1.2
GPNMB-201ENST00000258733 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.58□□□□□ -1.2
GPNMB-201ENST00000258733 SRP72O76094 671 aaKnown RBP7.58□□□□□ -1.2
GPNMB-201ENST00000258733 NOL4O94818 638 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 ACSL3O95573 720 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 PAK4O96013 591 aaPredicted RBP7.58□□□□□ -1.2
GPNMB-201ENST00000258733 HOXC4P09017 264 aaPredicted RBP7.58□□□□□ -1.2
GPNMB-201ENST00000258733 GAAP10253 952 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 ELNP15502 786 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 ACAA2P42765 397 aaKnown RBP7.58□□□□□ -1.2
GPNMB-201ENST00000258733 DGKGP49619 791 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 GPR143P51810 404 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 NUDT6P53370 316 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 VAMP2P63027 116 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 MTMR2Q13614 643 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 VEZF1Q14119 521 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 ATP6AP1Q15904 470 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 HIST2H2ACQ16777 129 aaPredicted RBP7.58□□□□□ -1.2
GPNMB-201ENST00000258733 IFIT1BQ5T764 474 aaKnown RBP7.58□□□□□ -1.2
GPNMB-201ENST00000258733 TEX261Q6UWH6 196 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 ZNF782Q6ZMW2 699 aaPredicted RBP7.58□□□□□ -1.2
GPNMB-201ENST00000258733 SAMD7Q7Z3H4 446 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 KLBQ86Z14 1044 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 FAM185AQ8N0U4 392 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 RBFAQ8N0V3 343 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 C9orf62Q8N4C0 152 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 LRRC17Q8N6Y2 441 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 UBA3Q8TBC4 463 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 AKT1S1Q96B36 256 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 ZNF707Q96C28 371 aaPredicted RBP7.58□□□□□ -1.2
GPNMB-201ENST00000258733 SERAC1Q96JX3 654 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 FAM71F1Q96KD3 344 aaPredicted RBP7.58□□□□□ -1.2
GPNMB-201ENST00000258733 GAL3ST2Q9H3Q3 398 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 ST6GALNAC4Q9H4F1 302 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 ARMCX1Q9P291 453 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 FBXO5Q9UKT4 447 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 KCNMB2Q9Y691 235 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 U3KQ87 197 aa7.58□□□□□ -1.2
GPNMB-201ENST00000258733 PHRF1Q9P1Y6 1649 aaKnown RBP7.58□□□□□ -1.2
GPNMB-201ENST00000258733 DUXAA6NLW8 204 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 H7BY64 318 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 ARPC5O15511 151 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 PJA2O43164 708 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 SLC43A1O75387 559 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 STARD3NLO95772 234 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 IFNA2P01563 188 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 ATP6V1B2P21281 511 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 RAP1GAPP47736 663 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 SERPINB10P48595 397 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 ADPRHP54922 357 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms