RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 INTS7Q9NVH2 962 aaKnown RBP18.38■□□□□ 0.53
TRIM47-201ENST00000254816 CA5BQ9Y2D0 317 aa18.38■□□□□ 0.53
TRIM47-201ENST00000254816 LRCH1Q9Y2L9 728 aa18.38■□□□□ 0.53
TRIM47-201ENST00000254816 SLC22A2O15244 555 aa18.38■□□□□ 0.53
TRIM47-201ENST00000254816 LATO43561 262 aa18.38■□□□□ 0.53
TRIM47-201ENST00000254816 SLC16A8O95907 504 aa18.38■□□□□ 0.53
TRIM47-201ENST00000254816 EBLN1P0CF75 366 aa18.38■□□□□ 0.53
TRIM47-201ENST00000254816 IMPA1P29218 277 aa18.38■□□□□ 0.53
TRIM47-201ENST00000254816 CLDN2P57739 230 aa18.38■□□□□ 0.53
TRIM47-201ENST00000254816 MLLT1Q03111 559 aaPredicted RBP18.38■□□□□ 0.53
TRIM47-201ENST00000254816 NAE1Q13564 534 aa18.38■□□□□ 0.53
TRIM47-201ENST00000254816 ZRSR2Q15696 482 aaKnown RBP18.38■□□□□ 0.53
TRIM47-201ENST00000254816 IZUMO2Q6UXV1 221 aa18.38■□□□□ 0.53
TRIM47-201ENST00000254816 CHST15Q7LFX5 561 aaPredicted RBP18.38■□□□□ 0.53
TRIM47-201ENST00000254816 FBXW8Q8N3Y1 598 aa18.38■□□□□ 0.53
TRIM47-201ENST00000254816 MTFMTQ96DP5 389 aaKnown RBP18.38■□□□□ 0.53
TRIM47-201ENST00000254816 CCDC138Q96M89 665 aa18.38■□□□□ 0.53
TRIM47-201ENST00000254816 DNAJC11Q9NVH1 559 aa18.38■□□□□ 0.53
TRIM47-201ENST00000254816 C2orf42Q9NWW7 574 aa18.38■□□□□ 0.53
TRIM47-201ENST00000254816 PSMD12O00232 456 aaPredicted RBP18.37■□□□□ 0.53
TRIM47-201ENST00000254816 SCAMP1O15126 338 aa18.37■□□□□ 0.53
TRIM47-201ENST00000254816 PRAMEF4O60810 478 aa18.37■□□□□ 0.53
TRIM47-201ENST00000254816 FKBP6O75344 327 aa18.37■□□□□ 0.53
TRIM47-201ENST00000254816 MYCLP1P12525 358 aaPredicted RBP18.37■□□□□ 0.53
TRIM47-201ENST00000254816 ADSLP30566 484 aaPredicted RBP18.37■□□□□ 0.53
TRIM47-201ENST00000254816 DIO3P55073 304 aa18.37■□□□□ 0.53
TRIM47-201ENST00000254816 CDC16Q13042 620 aa18.37■□□□□ 0.53
TRIM47-201ENST00000254816 CPSF6Q16630 551 aaKnown RBP eCLIP18.37■□□□□ 0.53
TRIM47-201ENST00000254816 LEXMQ3ZCV2 418 aa18.37■□□□□ 0.53
TRIM47-201ENST00000254816 PRAMEF9Q5VWM5 478 aa18.37■□□□□ 0.53
TRIM47-201ENST00000254816 RNF111Q6ZNA4 994 aa18.37■□□□□ 0.53
TRIM47-201ENST00000254816 PGBD3Q8N328 593 aa18.37■□□□□ 0.53
TRIM47-201ENST00000254816 SFRP1Q8N474 314 aa18.37■□□□□ 0.53
TRIM47-201ENST00000254816 RCN3Q96D15 328 aa18.37■□□□□ 0.53
TRIM47-201ENST00000254816 C1orf50Q9BV19 199 aa18.37■□□□□ 0.53
TRIM47-201ENST00000254816 ZDHHC5Q9C0B5 715 aa18.37■□□□□ 0.53
TRIM47-201ENST00000254816 OR52A5Q9H2C5 316 aa18.37■□□□□ 0.53
TRIM47-201ENST00000254816 MOSPD1Q9UJG1 213 aa18.37■□□□□ 0.53
TRIM47-201ENST00000254816 CLDN9O95484 217 aa18.37■□□□□ 0.53
TRIM47-201ENST00000254816 PRR35P0CG20 571 aa18.37■□□□□ 0.53
TRIM47-201ENST00000254816 ACADLP28330 430 aa18.37■□□□□ 0.53
TRIM47-201ENST00000254816 KLC1Q07866 573 aa18.37■□□□□ 0.53
TRIM47-201ENST00000254816 PTK2BQ14289 1009 aa18.37■□□□□ 0.53
TRIM47-201ENST00000254816 MAP7D1Q3KQU3 841 aa18.37■□□□□ 0.53
TRIM47-201ENST00000254816 PHC3Q8NDX5 983 aa18.37■□□□□ 0.53
TRIM47-201ENST00000254816 APOOQ9BUR5 198 aa18.37■□□□□ 0.53
TRIM47-201ENST00000254816 EBF1Q9UH73 591 aa18.37■□□□□ 0.53
TRIM47-201ENST00000254816 TRPS1Q9UHF7 1281 aa18.37■□□□□ 0.53
TRIM47-201ENST00000254816 CFAP20Q9Y6A4 193 aaKnown RBP18.37■□□□□ 0.53
TRIM47-201ENST00000254816 POM121BA6NF01 834 aa18.36■□□□□ 0.53
TRIM47-201ENST00000254816 C9JVG2 144 aa18.36■□□□□ 0.53
TRIM47-201ENST00000254816 VPS4BO75351 444 aa18.36■□□□□ 0.53
TRIM47-201ENST00000254816 CHRNB1P11230 501 aa18.36■□□□□ 0.53
TRIM47-201ENST00000254816 RPL10P27635 214 aaKnown RBP18.36■□□□□ 0.53
TRIM47-201ENST00000254816 TEAD1P28347 426 aa18.36■□□□□ 0.53
TRIM47-201ENST00000254816 LRRC36Q1X8D7 754 aa18.36■□□□□ 0.53
TRIM47-201ENST00000254816 THOC6Q86W42 341 aaKnown RBP18.36■□□□□ 0.53
TRIM47-201ENST00000254816 MSANTD3Q96H12 275 aa18.36■□□□□ 0.53
TRIM47-201ENST00000254816 NPAS2Q99743 824 aa18.36■□□□□ 0.53
TRIM47-201ENST00000254816 C1QTNF7Q9BXJ2 289 aa18.36■□□□□ 0.53
TRIM47-201ENST00000254816 DPEP2Q9H4A9 486 aa18.36■□□□□ 0.53
TRIM47-201ENST00000254816 PLEKHM1Q9Y4G2 1056 aa18.36■□□□□ 0.53
TRIM47-201ENST00000254816 PCM1Q15154 2024 aa18.36■□□□□ 0.53
TRIM47-201ENST00000254816 H0Y8X5 98 aa18.35■□□□□ 0.53
TRIM47-201ENST00000254816 KMOO15229 486 aa18.35■□□□□ 0.53
TRIM47-201ENST00000254816 CEACAM5P06731 702 aa18.35■□□□□ 0.53
TRIM47-201ENST00000254816 ACP5P13686 325 aa18.35■□□□□ 0.53
TRIM47-201ENST00000254816 GPX3P22352 226 aa18.35■□□□□ 0.53
TRIM47-201ENST00000254816 MTTPP55157 894 aa18.35■□□□□ 0.53
TRIM47-201ENST00000254816 STX1BP61266 288 aa18.35■□□□□ 0.53
TRIM47-201ENST00000254816 RIC8BQ9NVN3 520 aa18.35■□□□□ 0.53
TRIM47-201ENST00000254816 ZNF490Q9ULM2 529 aaPredicted RBP18.35■□□□□ 0.53
TRIM47-201ENST00000254816 TSTA3Q13630 321 aaPredicted RBP18.35■□□□□ 0.53
TRIM47-201ENST00000254816 HERC3Q15034 1050 aa18.35■□□□□ 0.53
TRIM47-201ENST00000254816 C6orf136Q5SQH8 315 aa18.35■□□□□ 0.53
TRIM47-201ENST00000254816 AAGABQ6PD74 315 aa18.35■□□□□ 0.53
TRIM47-201ENST00000254816 TTC23LQ6PF05 361 aa18.35■□□□□ 0.53
TRIM47-201ENST00000254816 ZNF852Q6ZMS4 543 aa18.35■□□□□ 0.53
TRIM47-201ENST00000254816 DSELQ8IZU8 1212 aa18.35■□□□□ 0.53
TRIM47-201ENST00000254816 OXR1Q8N573 874 aa18.35■□□□□ 0.53
TRIM47-201ENST00000254816 OR5AR1Q8NGP9 310 aa18.35■□□□□ 0.53
TRIM47-201ENST00000254816 ZNF480Q8WV37 535 aa18.35■□□□□ 0.53
TRIM47-201ENST00000254816 OR4K3Q96R72 315 aa18.35■□□□□ 0.53
TRIM47-201ENST00000254816 NRTNQ99748 197 aa18.35■□□□□ 0.53
TRIM47-201ENST00000254816 BTBD1Q9H0C5 482 aa18.35■□□□□ 0.53
TRIM47-201ENST00000254816 PLAGL1Q9UM63 463 aa18.35■□□□□ 0.53
TRIM47-201ENST00000254816 DUSP12Q9UNI6 340 aa18.35■□□□□ 0.53
TRIM47-201ENST00000254816 ASF1AQ9Y294 204 aa18.35■□□□□ 0.53
TRIM47-201ENST00000254816 MANBAO00462 879 aa18.34■□□□□ 0.53
TRIM47-201ENST00000254816 MSX2P35548 267 aaPredicted RBP18.34■□□□□ 0.53
TRIM47-201ENST00000254816 HALP42357 657 aa18.34■□□□□ 0.53
TRIM47-201ENST00000254816 MAPK9P45984 424 aa18.34■□□□□ 0.53
TRIM47-201ENST00000254816 PLOD1Q02809 727 aaPredicted RBP18.34■□□□□ 0.53
TRIM47-201ENST00000254816 NR6A1Q15406 480 aa18.34■□□□□ 0.53
TRIM47-201ENST00000254816 ATP6AP1LQ52LC2 224 aa18.34■□□□□ 0.53
TRIM47-201ENST00000254816 TMEM154Q6P9G4 183 aa18.34■□□□□ 0.53
TRIM47-201ENST00000254816 DHDDSQ86SQ9 333 aa18.34■□□□□ 0.53
TRIM47-201ENST00000254816 PDZD3Q86UT5 571 aa18.34■□□□□ 0.53
TRIM47-201ENST00000254816 FUNDC1Q8IVP5 155 aa18.34■□□□□ 0.53
TRIM47-201ENST00000254816 FNDC5Q8NAU1 212 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms