RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 ARSKQ6UWY0 536 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 CPNE9Q8IYJ1 553 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 ELOVL4Q9GZR5 314 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 TP63Q9H3D4 680 aaPredicted RBP12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 IPPKQ9H8X2 491 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 TMEM27Q9HBJ8 222 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 C14orf119Q9NWQ9 140 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 ZNF214Q9UL59 606 aaPredicted RBP12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 OR10H1Q9Y4A9 318 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 BCL9LQ86UU0 1499 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 TSTD3H0UI37 97 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 SSX5O60225 188 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 HMGN1P05114 100 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 PKMP14618 531 aaKnown RBP12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 RPL9P32969 192 aaKnown RBP12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 VAMP2P63027 116 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 SRSF11Q05519 484 aaKnown RBP12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 CLCA4Q14CN2 919 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 PIGGQ5H8A4 983 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 GRHL2Q6ISB3 625 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 ADGRG2Q8IZP9 1017 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 UBIAD1Q9Y5Z9 338 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 ZNF701M0R085 212 aaPredicted RBP12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 PPP1R11O60927 126 aaPredicted RBP12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 CD247P20963 164 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 MAPK8P45983 427 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 APLP1P51693 650 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 TCEA2Q15560 299 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 TEX44Q53QW1 395 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 C6orf141Q5SZD1 244 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 LRRC66Q68CR7 880 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 CRTC1Q6UUV9 634 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 DCDC5Q6ZRR9 648 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 JAZF1Q86VZ6 243 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 DCP2Q8IU60 420 aaKnown RBP12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 TRAPPC5Q8IUR0 188 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 LGI2Q8N0V4 545 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 GHDCQ8N2G8 530 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 PLD5Q8N7P1 536 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 OR4C6Q8NH72 309 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 SLCO2A1Q92959 643 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 IL4I1Q96RQ9 567 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 SDCBP2Q9H190 292 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 BRD7Q9NPI1 651 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 MANSC4A6NHS7 340 aaPredicted RBP12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 MCIDASD6RGH6 385 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 PAK4O96013 591 aaPredicted RBP12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 GBX2P52951 348 aaPredicted RBP12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 NUDT6P53370 316 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 RPS3AP61247 264 aaKnown RBP12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 SSTP61278 116 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 SLC10A7Q0GE19 358 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 LARS2Q15031 903 aaKnown RBP12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 LGI4Q8N135 537 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 NAT16Q8N8M0 369 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 ADAMTS15Q8TE58 950 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 ZUFSPQ96AP4 578 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 SLC45A3Q96JT2 553 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 MAPKAP1Q9BPZ7 522 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 LGR4Q9BXB1 951 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 MIR1-1HGQ9H1L0 117 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 MTG2Q9H4K7 406 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 SYNDIG1Q9H7V2 258 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 ABCC13Q9NSE7 274 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 EBF1Q9UH73 591 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 PCDHGB7Q9Y5F8 929 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 PCDHGA11Q9Y5H2 935 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 AKAP12Q02952 1782 aa12.9□□□□□ -0.34
PCDHGA3-201ENST00000253812 NKRFO15226 690 aaKnown RBP eCLIP12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 MTA2O94776 668 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 GNAZP19086 355 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 S100PP25815 95 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 AGTR1P30556 359 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 GPX6P59796 221 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 ERVK-8P63133 956 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 E2F1Q01094 437 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 TARDBPQ13148 414 aaKnown RBP eCLIP12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 MFSD10Q14728 455 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 PTGR1Q14914 329 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 CHSY3Q70JA7 882 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 SNX29P2Q8IUI4 249 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 PGBD3Q8N328 593 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 FAM109AQ8N4B1 249 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 OR8K3Q8NH51 312 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 ZNF384Q8TF68 577 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 MUS81Q96NY9 551 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 OR52B2Q96RD2 323 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 BEX1Q9HBH7 125 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 GLOD4Q9HC38 313 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 CHRAC1Q9NRG0 131 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 CDH7Q9ULB5 785 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 PCDHGB1Q9Y5G3 927 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 LRRN3E7EW58 273 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 DFNA5O60443 496 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 SLC19A2O60779 497 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 KAT7O95251 611 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 CLIC3O95833 236 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 GALEQ14376 348 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 HASPINQ8TF76 798 aa12.89□□□□□ -0.35
PCDHGA3-201ENST00000253812 NEDD4LQ96PU5 975 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms