RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 CYP4Z1Q86W10 505 aa12.74□□□□□ -0.37
MSH2-201ENST00000233146 ADHFE1Q8IWW8 467 aa12.74□□□□□ -0.37
MSH2-201ENST00000233146 GHDCQ8N2G8 530 aa12.74□□□□□ -0.37
MSH2-201ENST00000233146 CAMKK1Q8N5S9 505 aa12.74□□□□□ -0.37
MSH2-201ENST00000233146 OR4D10Q8NGI6 311 aa12.74□□□□□ -0.37
MSH2-201ENST00000233146 QRFPRQ96P65 431 aa12.74□□□□□ -0.37
MSH2-201ENST00000233146 ANKEF1Q9NU02 776 aa12.74□□□□□ -0.37
MSH2-201ENST00000233146 KCMF1Q9P0J7 381 aa12.74□□□□□ -0.37
MSH2-201ENST00000233146 PRR12Q9ULL5 1215 aa12.74□□□□□ -0.37
MSH2-201ENST00000233146 SBF2Q86WG5 1849 aa12.74□□□□□ -0.37
MSH2-201ENST00000233146 hCG_1807616A0A1W2PRN6 198 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 SLC22A23A1A5C7 686 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 IPO13O94829 963 aaKnown RBP12.73□□□□□ -0.37
MSH2-201ENST00000233146 IGFBP5P24593 272 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 ZFP36L2P47974 494 aaKnown RBP12.73□□□□□ -0.37
MSH2-201ENST00000233146 RGS6P49758 472 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 OVCH2Q7RTZ1 564 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 ZSWIM9Q86XI8 627 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 CEP97Q8IW35 865 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 DCAF4Q8WV16 495 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 RXFP2Q8WXD0 754 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 BSNDQ8WZ55 320 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 ZC3HAV1LQ96H79 300 aaKnown RBP12.73□□□□□ -0.37
MSH2-201ENST00000233146 RIBC2Q9H4K1 309 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 SPATA6Q9NWH7 488 aaPredicted RBP12.73□□□□□ -0.37
MSH2-201ENST00000233146 ZNF112Q9UJU3 913 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 MGAT4AQ9UM21 535 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 COL1A2P08123 1366 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 A0A096LPI6 279 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 A8MT66 165 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 DDX39AO00148 427 aaKnown RBP12.73□□□□□ -0.37
MSH2-201ENST00000233146 KPNA5O15131 536 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 C1RP00736 705 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 EPOP01588 193 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 FCER2P06734 321 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 CYP4B1P13584 511 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 C21orf33P30042 268 aaPredicted RBP12.73□□□□□ -0.37
MSH2-201ENST00000233146 BCAT1P54687 386 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 RAB10P61026 200 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 RIPPLY1Q0D2K3 151 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 RCAN2Q14206 197 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 MICAQ29983 383 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 MTERF2Q49AM1 385 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 KRT73Q86Y46 540 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 HIPK1Q86Z02 1210 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 LAX1Q8IWV1 398 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 UBE2J2Q8N2K1 259 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 OR5B17Q8NGF7 314 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 OR52K1Q8NGK4 314 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 CLHC1Q8NHS4 586 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 HEXDCQ8WVB3 486 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 RBM14Q96PK6 669 aaKnown RBP12.73□□□□□ -0.37
MSH2-201ENST00000233146 RBP7Q96R05 134 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 RIT2Q99578 217 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 GSTO2Q9H4Y5 243 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 SPON1Q9HCB6 807 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 NDRG4Q9ULP0 352 aaKnown RBP12.73□□□□□ -0.37
MSH2-201ENST00000233146 BAIAP2Q9UQB8 552 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 EFCAB10A6NFE3 127 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 C2CD4BA6NLJ0 364 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 PCDH17O14917 1159 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 RHOBTB1O94844 696 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 LYPLA2O95372 231 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 PSMB4P28070 264 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 YWHABP31946 246 aaKnown RBP12.73□□□□□ -0.37
MSH2-201ENST00000233146 CLCN7P51798 805 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 RAB14P61106 215 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 ELP6Q0PNE2 266 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 OLIG2Q13516 323 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 PROX2Q3B8N5 592 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 CYP27C1Q4G0S4 372 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 PAN2Q504Q3 1202 aaKnown RBP12.73□□□□□ -0.37
MSH2-201ENST00000233146 HSD17B12Q53GQ0 312 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 PDSS1Q5T2R2 415 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 TSPYL5Q86VY4 417 aaPredicted RBP12.73□□□□□ -0.37
MSH2-201ENST00000233146 DUSP18Q8NEJ0 188 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 RHBDF1Q96CC6 855 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 CCDC126Q96EE4 140 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 RTP3Q9BQQ7 232 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 ADPGKQ9BRR6 497 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 COPS4Q9BT78 406 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 DPCDQ9BVM2 203 aaPredicted RBP12.73□□□□□ -0.37
MSH2-201ENST00000233146 ESRP2Q9H6T0 727 aaKnown RBP12.73□□□□□ -0.37
MSH2-201ENST00000233146 ACTR8Q9H981 624 aa12.73□□□□□ -0.37
MSH2-201ENST00000233146 GREB1LQ9C091 1923 aaPredicted RBP12.72□□□□□ -0.37
MSH2-201ENST00000233146 SMCHD1A6NHR9 2005 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 E9PAM4 449 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 POU1F1P28069 291 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 KCNQ1P51787 676 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 UBXN2AP68543 259 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 FGFBP1Q14512 234 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 RPS6KA2Q15349 733 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 CDO1Q16878 200 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 KIAA0319Q5VV43 1072 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 FCRLBQ6BAA4 426 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 RRM2BQ7LG56 351 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 CHPFQ8IZ52 775 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 ZNF675Q8TD23 568 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 CLEC4DQ8WXI8 215 aa12.72□□□□□ -0.37
MSH2-201ENST00000233146 SLC47A1Q96FL8 570 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms