RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 HACD2Q6Y1H2 254 aa13.53□□□□□ -0.24
HCFC2-201ENST00000229330 RPS27LQ71UM5 84 aaKnown RBP13.53□□□□□ -0.24
HCFC2-201ENST00000229330 LINGO2Q7L985 606 aa13.53□□□□□ -0.24
HCFC2-201ENST00000229330 OAFQ86UD1 273 aa13.53□□□□□ -0.24
HCFC2-201ENST00000229330 FAM98AQ8NCA5 519 aaKnown RBP13.53□□□□□ -0.24
HCFC2-201ENST00000229330 COL26A1Q96A83 441 aa13.53□□□□□ -0.24
HCFC2-201ENST00000229330 FTHL17Q9BXU8 183 aa13.53□□□□□ -0.24
HCFC2-201ENST00000229330 CIPCQ9C0C6 399 aa13.53□□□□□ -0.24
HCFC2-201ENST00000229330 EMC3Q9P0I2 261 aa13.53□□□□□ -0.24
HCFC2-201ENST00000229330 L7N2F9 121 aa13.52□□□□□ -0.24
HCFC2-201ENST00000229330 HSD17B12Q53GQ0 312 aa13.52□□□□□ -0.24
HCFC2-201ENST00000229330 ZNF675Q8TD23 568 aa13.52□□□□□ -0.24
HCFC2-201ENST00000229330 CLEC4CQ8WTT0 213 aa13.52□□□□□ -0.24
HCFC2-201ENST00000229330 ING5Q8WYH8 240 aa13.52□□□□□ -0.24
HCFC2-201ENST00000229330 RAD51AP1Q96B01 352 aa13.52□□□□□ -0.24
HCFC2-201ENST00000229330 COL20A1Q9P218 1284 aa13.52□□□□□ -0.24
HCFC2-201ENST00000229330 ECI2O75521 394 aa13.52□□□□□ -0.25
HCFC2-201ENST00000229330 ERAL1O75616 437 aaKnown RBP13.52□□□□□ -0.25
HCFC2-201ENST00000229330 FKBP1BP68106 108 aa13.52□□□□□ -0.25
HCFC2-201ENST00000229330 CLCA4Q14CN2 919 aa13.52□□□□□ -0.25
HCFC2-201ENST00000229330 FAAH2Q6GMR7 532 aa13.52□□□□□ -0.25
HCFC2-201ENST00000229330 NANOGP8Q6NSW7 305 aa13.52□□□□□ -0.25
HCFC2-201ENST00000229330 MARCH9Q86YJ5 346 aa13.52□□□□□ -0.25
HCFC2-201ENST00000229330 OR13J1Q8NGT2 312 aa13.52□□□□□ -0.25
HCFC2-201ENST00000229330 WDR48Q8TAF3 677 aa13.52□□□□□ -0.25
HCFC2-201ENST00000229330 ZDHHC6Q9H6R6 413 aa13.52□□□□□ -0.25
HCFC2-201ENST00000229330 NANOGQ9H9S0 305 aa13.52□□□□□ -0.25
HCFC2-201ENST00000229330 THUMPD1Q9NXG2 353 aaKnown RBP13.52□□□□□ -0.25
HCFC2-201ENST00000229330 PCDH10Q9P2E7 1040 aa13.52□□□□□ -0.25
HCFC2-201ENST00000229330 UBQLN2Q9UHD9 624 aa13.52□□□□□ -0.25
HCFC2-201ENST00000229330 TRPS1Q9UHF7 1281 aa13.52□□□□□ -0.25
HCFC2-201ENST00000229330 MYH6P13533 1939 aa13.52□□□□□ -0.25
HCFC2-201ENST00000229330 BHMG1C9JSJ3 638 aaPredicted RBP13.52□□□□□ -0.25
HCFC2-201ENST00000229330 MT-ND2P03891 347 aa13.52□□□□□ -0.25
HCFC2-201ENST00000229330 ERP29P30040 261 aaKnown RBP13.52□□□□□ -0.25
HCFC2-201ENST00000229330 ZNF81P51508 661 aa13.52□□□□□ -0.25
HCFC2-201ENST00000229330 MRPS6P82932 125 aaKnown RBP13.52□□□□□ -0.25
HCFC2-201ENST00000229330 MS4A2Q01362 244 aa13.52□□□□□ -0.25
HCFC2-201ENST00000229330 SMCO1Q147U7 214 aa13.52□□□□□ -0.25
HCFC2-201ENST00000229330 FBXL19Q6PCT2 694 aa13.52□□□□□ -0.25
HCFC2-201ENST00000229330 MMAAQ8IVH4 418 aaKnown RBP13.52□□□□□ -0.25
HCFC2-201ENST00000229330 SLC15A3Q8IY34 581 aa13.52□□□□□ -0.25
HCFC2-201ENST00000229330 BRSK1Q8TDC3 778 aa13.52□□□□□ -0.25
HCFC2-201ENST00000229330 XAGE5Q8WWM1 108 aa13.52□□□□□ -0.25
HCFC2-201ENST00000229330 BCL7BQ9BQE9 202 aa13.52□□□□□ -0.25
HCFC2-201ENST00000229330 SLA2Q9H6Q3 261 aa13.52□□□□□ -0.25
HCFC2-201ENST00000229330 DNMT3LQ9UJW3 386 aa13.52□□□□□ -0.25
HCFC2-201ENST00000229330 B3GNT3Q9Y2A9 372 aa13.52□□□□□ -0.25
HCFC2-201ENST00000229330 GPR25O00155 361 aa13.52□□□□□ -0.25
HCFC2-201ENST00000229330 CLIC1O00299 241 aa13.52□□□□□ -0.25
HCFC2-201ENST00000229330 TFAP2AP05549 437 aa13.52□□□□□ -0.25
HCFC2-201ENST00000229330 MSL3P1P0C860 447 aa13.52□□□□□ -0.25
HCFC2-201ENST00000229330 FUT4P22083 530 aa13.52□□□□□ -0.25
HCFC2-201ENST00000229330 ETV4P43268 484 aa13.52□□□□□ -0.25
HCFC2-201ENST00000229330 ATRNL1Q5VV63 1379 aa13.52□□□□□ -0.25
HCFC2-201ENST00000229330 ADGRD2Q7Z7M1 963 aa13.52□□□□□ -0.25
HCFC2-201ENST00000229330 PQLC3Q8N755 202 aa13.52□□□□□ -0.25
HCFC2-201ENST00000229330 TXNDC5Q8NBS9 432 aaKnown RBP13.52□□□□□ -0.25
HCFC2-201ENST00000229330 GPR20Q99678 358 aa13.52□□□□□ -0.25
HCFC2-201ENST00000229330 FAM118AQ9NWS6 357 aa13.52□□□□□ -0.25
HCFC2-201ENST00000229330 GIMAP2Q9UG22 337 aa13.52□□□□□ -0.25
HCFC2-201ENST00000229330 ISM1B1AKI9 464 aa13.51□□□□□ -0.25
HCFC2-201ENST00000229330 M0R233 179 aa13.51□□□□□ -0.25
HCFC2-201ENST00000229330 ESR1P03372 595 aa13.51□□□□□ -0.25
HCFC2-201ENST00000229330 DNTTP04053 509 aa13.51□□□□□ -0.25
HCFC2-201ENST00000229330 ZNF24P17028 368 aa13.51□□□□□ -0.25
HCFC2-201ENST00000229330 EFNA1P20827 205 aaPredicted RBP13.51□□□□□ -0.25
HCFC2-201ENST00000229330 CD40LGP29965 261 aa13.51□□□□□ -0.25
HCFC2-201ENST00000229330 ARL4DP49703 201 aa13.51□□□□□ -0.25
HCFC2-201ENST00000229330 MBTD1Q05BQ5 628 aa13.51□□□□□ -0.25
HCFC2-201ENST00000229330 TARDBPQ13148 414 aaKnown RBP eCLIP13.51□□□□□ -0.25
HCFC2-201ENST00000229330 HEPACAMQ14CZ8 416 aa13.51□□□□□ -0.25
HCFC2-201ENST00000229330 RGMBQ6NW40 437 aa13.51□□□□□ -0.25
HCFC2-201ENST00000229330 POMGNT2Q8NAT1 580 aa13.51□□□□□ -0.25
HCFC2-201ENST00000229330 MAPKAP1Q9BPZ7 522 aa13.51□□□□□ -0.25
HCFC2-201ENST00000229330 ASPNQ9BXN1 380 aa13.51□□□□□ -0.25
HCFC2-201ENST00000229330 OXCT2Q9BYC2 517 aaPredicted RBP13.51□□□□□ -0.25
HCFC2-201ENST00000229330 ZNF282Q9UDV7 671 aaPredicted RBP13.51□□□□□ -0.25
HCFC2-201ENST00000229330 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.51□□□□□ -0.25
HCFC2-201ENST00000229330 PITPNM1O00562 1244 aa13.51□□□□□ -0.25
HCFC2-201ENST00000229330 CLCN4P51793 760 aa13.51□□□□□ -0.25
HCFC2-201ENST00000229330 XKP51811 444 aa13.51□□□□□ -0.25
HCFC2-201ENST00000229330 SNRPD1P62314 119 aaKnown RBP13.51□□□□□ -0.25
HCFC2-201ENST00000229330 GANABQ14697 944 aaKnown RBP13.51□□□□□ -0.25
HCFC2-201ENST00000229330 PNCKQ6P2M8 343 aa13.51□□□□□ -0.25
HCFC2-201ENST00000229330 PAQR3Q6TCH7 311 aa13.51□□□□□ -0.25
HCFC2-201ENST00000229330 TMIEQ8NEW7 156 aa13.51□□□□□ -0.25
HCFC2-201ENST00000229330 NLGN2Q8NFZ4 835 aa13.51□□□□□ -0.25
HCFC2-201ENST00000229330 MFSD1Q9H3U5 465 aa13.51□□□□□ -0.25
HCFC2-201ENST00000229330 SMURF1Q9HCE7 757 aa13.51□□□□□ -0.25
HCFC2-201ENST00000229330 UPB1Q9UBR1 384 aa13.51□□□□□ -0.25
HCFC2-201ENST00000229330 HMGXB4Q9UGU5 601 aa13.51□□□□□ -0.25
HCFC2-201ENST00000229330 ATPIF1Q9UII2 106 aa13.51□□□□□ -0.25
HCFC2-201ENST00000229330 HTR1EP28566 365 aa13.51□□□□□ -0.25
HCFC2-201ENST00000229330 AP2S1P53680 142 aaPredicted RBP13.51□□□□□ -0.25
HCFC2-201ENST00000229330 BIKQ13323 160 aa13.51□□□□□ -0.25
HCFC2-201ENST00000229330 TMEM44Q2T9K0 475 aa13.51□□□□□ -0.25
HCFC2-201ENST00000229330 DPY19L3Q6ZPD9 716 aa13.51□□□□□ -0.25
HCFC2-201ENST00000229330 BEND5Q7L4P6 421 aa13.51□□□□□ -0.25
HCFC2-201ENST00000229330 CMTR2Q8IYT2 770 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms