RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 ZNF675Q8TD23 568 aa14.23□□□□□ -0.13
PRDM4-201ENST00000228437 TMEM245Q9H330 911 aa14.23□□□□□ -0.13
PRDM4-201ENST00000228437 MFSD1Q9H3U5 465 aa14.23□□□□□ -0.13
PRDM4-201ENST00000228437 AASDHPPTQ9NRN7 309 aa14.23□□□□□ -0.13
PRDM4-201ENST00000228437 POLR3BQ9NW08 1133 aaPredicted RBP14.23□□□□□ -0.13
PRDM4-201ENST00000228437 PIM2Q9P1W9 311 aa14.23□□□□□ -0.13
PRDM4-201ENST00000228437 ABCD2Q9UBJ2 740 aa14.23□□□□□ -0.13
PRDM4-201ENST00000228437 ZFC3H1O60293 1989 aaKnown RBP14.23□□□□□ -0.13
PRDM4-201ENST00000228437 H3BM21 787 aa14.22□□□□□ -0.13
PRDM4-201ENST00000228437 I6L893 689 aaPredicted RBP14.22□□□□□ -0.13
PRDM4-201ENST00000228437 TNFRSF11BO00300 401 aa14.22□□□□□ -0.13
PRDM4-201ENST00000228437 ERN1O75460 977 aaKnown RBP14.22□□□□□ -0.13
PRDM4-201ENST00000228437 EPB42P16452 691 aa14.22□□□□□ -0.13
PRDM4-201ENST00000228437 PRKACBP22694 351 aa14.22□□□□□ -0.13
PRDM4-201ENST00000228437 ERVPABLB-1P60509 514 aa14.22□□□□□ -0.13
PRDM4-201ENST00000228437 NKX3-2P78367 333 aa14.22□□□□□ -0.13
PRDM4-201ENST00000228437 ZXDBP98169 803 aa14.22□□□□□ -0.13
PRDM4-201ENST00000228437 ST3GAL4Q11206 333 aa14.22□□□□□ -0.13
PRDM4-201ENST00000228437 BOP1Q14137 746 aaKnown RBP14.22□□□□□ -0.13
PRDM4-201ENST00000228437 SLC39A12Q504Y0 691 aa14.22□□□□□ -0.13
PRDM4-201ENST00000228437 USP39Q53GS9 565 aaKnown RBP14.22□□□□□ -0.13
PRDM4-201ENST00000228437 AGAP6Q5VW22 663 aa14.22□□□□□ -0.13
PRDM4-201ENST00000228437 TMEM179BQ7Z7N9 219 aa14.22□□□□□ -0.13
PRDM4-201ENST00000228437 LRRC20Q8TCA0 184 aa14.22□□□□□ -0.13
PRDM4-201ENST00000228437 AGAP4Q96P64 663 aa14.22□□□□□ -0.13
PRDM4-201ENST00000228437 AARSD1Q9BTE6 412 aaKnown RBP14.22□□□□□ -0.13
PRDM4-201ENST00000228437 EMILIN2Q9BXX0 1053 aa14.22□□□□□ -0.13
PRDM4-201ENST00000228437 NTN4Q9HB63 628 aa14.22□□□□□ -0.13
PRDM4-201ENST00000228437 ACOT13Q9NPJ3 140 aa14.22□□□□□ -0.13
PRDM4-201ENST00000228437 SARDHQ9UL12 918 aa14.22□□□□□ -0.13
PRDM4-201ENST00000228437 CLEC4AQ9UMR7 237 aa14.22□□□□□ -0.13
PRDM4-201ENST00000228437 MRPS7Q9Y2R9 242 aaKnown RBP14.22□□□□□ -0.13
PRDM4-201ENST00000228437 SHROOM3Q8TF72 1996 aa14.22□□□□□ -0.13
PRDM4-201ENST00000228437 ISPDA4D126 451 aa14.22□□□□□ -0.13
PRDM4-201ENST00000228437 FABP12A6NFH5 140 aa14.22□□□□□ -0.13
PRDM4-201ENST00000228437 ZBTB42B2RXF5 422 aa14.22□□□□□ -0.13
PRDM4-201ENST00000228437 IFRD1O00458 451 aaPredicted RBP14.22□□□□□ -0.13
PRDM4-201ENST00000228437 ITPKAP23677 461 aa14.22□□□□□ -0.13
PRDM4-201ENST00000228437 BTBD16Q32M84 506 aa14.22□□□□□ -0.13
PRDM4-201ENST00000228437 TIMM50Q3ZCQ8 353 aa14.22□□□□□ -0.13
PRDM4-201ENST00000228437 LETMD1Q6P1Q0 360 aa14.22□□□□□ -0.13
PRDM4-201ENST00000228437 ZNF598Q86UK7 904 aaKnown RBP14.22□□□□□ -0.13
PRDM4-201ENST00000228437 ZFAND4Q86XD8 727 aa14.22□□□□□ -0.13
PRDM4-201ENST00000228437 CACTIN-AS1Q8N1I8 211 aa14.22□□□□□ -0.13
PRDM4-201ENST00000228437 STK40Q8N2I9 435 aa14.22□□□□□ -0.13
PRDM4-201ENST00000228437 ELMOD1Q8N336 334 aa14.22□□□□□ -0.13
PRDM4-201ENST00000228437 OR7G1Q8NGA0 311 aa14.22□□□□□ -0.13
PRDM4-201ENST00000228437 FBXO32Q969P5 355 aa14.22□□□□□ -0.13
PRDM4-201ENST00000228437 ZNF599Q96NL3 588 aa14.22□□□□□ -0.13
PRDM4-201ENST00000228437 FYTTD1Q96QD9 318 aaKnown RBP14.22□□□□□ -0.13
PRDM4-201ENST00000228437 ZYG11BQ9C0D3 744 aa14.22□□□□□ -0.13
PRDM4-201ENST00000228437 HOXD1Q9GZZ0 328 aa14.22□□□□□ -0.13
PRDM4-201ENST00000228437 IGKV6D-21A0A0A0MT36 114 aa14.22□□□□□ -0.13
PRDM4-201ENST00000228437 MYL12BO14950 172 aa14.22□□□□□ -0.13
PRDM4-201ENST00000228437 MATN4O95460 622 aa14.22□□□□□ -0.13
PRDM4-201ENST00000228437 CA5AP35218 305 aa14.22□□□□□ -0.13
PRDM4-201ENST00000228437 LIPAP38571 399 aa14.22□□□□□ -0.13
PRDM4-201ENST00000228437 PTPN5P54829 565 aa14.22□□□□□ -0.13
PRDM4-201ENST00000228437 SCN1BQ07699 218 aa14.22□□□□□ -0.13
PRDM4-201ENST00000228437 ACOX1Q15067 660 aa14.22□□□□□ -0.13
PRDM4-201ENST00000228437 ZSWIM7Q19AV6 140 aa14.22□□□□□ -0.13
PRDM4-201ENST00000228437 ZNF181Q2M3W8 571 aa14.22□□□□□ -0.13
PRDM4-201ENST00000228437 LINGO4Q6UY18 593 aa14.22□□□□□ -0.13
PRDM4-201ENST00000228437 SLC16A12Q6ZSM3 486 aa14.22□□□□□ -0.13
PRDM4-201ENST00000228437 PEX5LQ8IYB4 626 aa14.22□□□□□ -0.13
PRDM4-201ENST00000228437 NEDD4LQ96PU5 975 aa14.22□□□□□ -0.13
PRDM4-201ENST00000228437 RAD18Q9NS91 495 aa14.22□□□□□ -0.13
PRDM4-201ENST00000228437 ABCC13Q9NSE7 274 aa14.22□□□□□ -0.13
PRDM4-201ENST00000228437 FAM92AA1XBS5 289 aa14.21□□□□□ -0.13
PRDM4-201ENST00000228437 SUV39H1O43463 412 aa14.21□□□□□ -0.13
PRDM4-201ENST00000228437 ICMTO60725 284 aa14.21□□□□□ -0.13
PRDM4-201ENST00000228437 B3GALT4O96024 378 aa14.21□□□□□ -0.13
PRDM4-201ENST00000228437 UQCRC1P31930 480 aa14.21□□□□□ -0.13
PRDM4-201ENST00000228437 KRT20P35900 424 aa14.21□□□□□ -0.13
PRDM4-201ENST00000228437 EIF2DP41214 584 aaKnown RBP14.21□□□□□ -0.13
PRDM4-201ENST00000228437 BEX3Q00994 111 aa14.21□□□□□ -0.13
PRDM4-201ENST00000228437 ZNF267Q14586 743 aaPredicted RBP14.21□□□□□ -0.13
PRDM4-201ENST00000228437 ALFQ53S48 1182 aa14.21□□□□□ -0.13
PRDM4-201ENST00000228437 DDI2Q5TDH0 399 aa14.21□□□□□ -0.13
PRDM4-201ENST00000228437 GTF2IRD2BQ6EKJ0 949 aa14.21□□□□□ -0.13
PRDM4-201ENST00000228437 GTF2IRD2Q86UP8 949 aa14.21□□□□□ -0.13
PRDM4-201ENST00000228437 SNAPC3Q92966 411 aa14.21□□□□□ -0.13
PRDM4-201ENST00000228437 KIAA1191Q96A73 305 aa14.21□□□□□ -0.13
PRDM4-201ENST00000228437 CCDC120Q96HB5 630 aa14.21□□□□□ -0.13
PRDM4-201ENST00000228437 DOK1Q99704 481 aa14.21□□□□□ -0.13
PRDM4-201ENST00000228437 TLR8Q9NR97 1041 aaKnown RBP14.21□□□□□ -0.13
PRDM4-201ENST00000228437 RHCGQ9UBD6 479 aa14.21□□□□□ -0.13
PRDM4-201ENST00000228437 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.21□□□□□ -0.13
PRDM4-201ENST00000228437 KCNK2O95069 426 aa14.21□□□□□ -0.13
PRDM4-201ENST00000228437 GABARAPO95166 117 aa14.21□□□□□ -0.13
PRDM4-201ENST00000228437 SLC10A3P09131 477 aa14.21□□□□□ -0.13
PRDM4-201ENST00000228437 ODC1P11926 461 aa14.21□□□□□ -0.13
PRDM4-201ENST00000228437 POLR2EP19388 210 aaKnown RBP14.21□□□□□ -0.13
PRDM4-201ENST00000228437 RRM2P31350 389 aa14.21□□□□□ -0.13
PRDM4-201ENST00000228437 ISL1P61371 349 aa14.21□□□□□ -0.13
PRDM4-201ENST00000228437 KIAA1614Q5VZ46 1190 aa14.21□□□□□ -0.13
PRDM4-201ENST00000228437 RGMBQ6NW40 437 aa14.21□□□□□ -0.13
PRDM4-201ENST00000228437 TRIM69Q86WT6 500 aa14.21□□□□□ -0.13
PRDM4-201ENST00000228437 KRT73Q86Y46 540 aa14.21□□□□□ -0.13
PRDM4-201ENST00000228437 ATP6V0D2Q8N8Y2 350 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms