RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 M0QYT0 321 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 CXCR6O00574 342 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 PAMP19021 973 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 TPI1P60174 286 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 SRP54P61011 504 aaKnown RBP14.35□□□□□ -0.11
PTPRA-201ENST00000216877 CTAG1AP78358 180 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 NR6A1Q15406 480 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 UNC50Q53HI1 259 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 CREB3L2Q70SY1 520 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 ZDHHC21Q8IVQ6 265 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 RIMKLAQ8IXN7 391 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 ST8SIA4Q92187 359 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 ISL2Q96A47 359 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 ABCG8Q9H221 673 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 GALNT9Q9HCQ5 603 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 SDR39U1Q9NRG7 319 aaPredicted RBP14.35□□□□□ -0.11
PTPRA-201ENST00000216877 CYB5R1Q9UHQ9 305 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 ZNF639Q9UID6 485 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 HACL1Q9UJ83 578 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 MGAT4AQ9UM21 535 aa14.35□□□□□ -0.11
PTPRA-201ENST00000216877 UBA6A0AVT1 1052 aaPredicted RBP14.34□□□□□ -0.11
PTPRA-201ENST00000216877 NT5C1B-RDH14C9J2C7 533 aa14.34□□□□□ -0.11
PTPRA-201ENST00000216877 HOXD8P13378 290 aaPredicted RBP14.34□□□□□ -0.11
PTPRA-201ENST00000216877 TALDO1P37837 337 aa14.34□□□□□ -0.11
PTPRA-201ENST00000216877 CHRNA4P43681 627 aa14.34□□□□□ -0.11
PTPRA-201ENST00000216877 MGAT3Q09327 533 aa14.34□□□□□ -0.11
PTPRA-201ENST00000216877 PTPRCAPQ14761 206 aa14.34□□□□□ -0.11
PTPRA-201ENST00000216877 DPYSL2Q16555 572 aa14.34□□□□□ -0.11
PTPRA-201ENST00000216877 UGT8Q16880 541 aa14.34□□□□□ -0.11
PTPRA-201ENST00000216877 RUNDC3AQ59EK9 446 aa14.34□□□□□ -0.11
PTPRA-201ENST00000216877 C15orf52Q6ZUT6 534 aaKnown RBP14.34□□□□□ -0.11
PTPRA-201ENST00000216877 SLC34A3Q8N130 599 aa14.34□□□□□ -0.11
PTPRA-201ENST00000216877 DNASE1L2Q92874 299 aa14.34□□□□□ -0.11
PTPRA-201ENST00000216877 FAM120BQ96EK7 910 aaKnown RBP14.34□□□□□ -0.11
PTPRA-201ENST00000216877 CCDC32Q9BV29 185 aa14.34□□□□□ -0.11
PTPRA-201ENST00000216877 ASPNQ9BXN1 380 aa14.34□□□□□ -0.11
PTPRA-201ENST00000216877 MS4A7Q9GZW8 240 aaPredicted RBP14.34□□□□□ -0.11
PTPRA-201ENST00000216877 EIF2B3Q9NR50 452 aaKnown RBP14.34□□□□□ -0.11
PTPRA-201ENST00000216877 AGO1Q9UL18 857 aaKnown RBP14.34□□□□□ -0.11
PTPRA-201ENST00000216877 SLC9A8Q9Y2E8 581 aa14.34□□□□□ -0.11
PTPRA-201ENST00000216877 NUP214P35658 2090 aaPredicted RBP14.34□□□□□ -0.11
PTPRA-201ENST00000216877 B4DXG7 233 aa14.34□□□□□ -0.11
PTPRA-201ENST00000216877 DDNO94850 711 aaPredicted RBP14.34□□□□□ -0.11
PTPRA-201ENST00000216877 AP2A2O94973 939 aa14.34□□□□□ -0.11
PTPRA-201ENST00000216877 MYL3P08590 195 aa14.34□□□□□ -0.11
PTPRA-201ENST00000216877 ZNF81P51508 661 aa14.34□□□□□ -0.11
PTPRA-201ENST00000216877 PITX1P78337 314 aaPredicted RBP14.34□□□□□ -0.11
PTPRA-201ENST00000216877 ZNF33BQ06732 778 aa14.34□□□□□ -0.11
PTPRA-201ENST00000216877 PCBP1Q15365 356 aaKnown RBP eCLIP14.34□□□□□ -0.11
PTPRA-201ENST00000216877 CYHR1Q6ZMK1 362 aa14.34□□□□□ -0.11
PTPRA-201ENST00000216877 METTL23Q86XA0 190 aa14.34□□□□□ -0.11
PTPRA-201ENST00000216877 TMC8Q8IU68 726 aa14.34□□□□□ -0.11
PTPRA-201ENST00000216877 SYTL5Q8TDW5 730 aaPredicted RBP14.34□□□□□ -0.11
PTPRA-201ENST00000216877 TEKT5Q96M29 485 aa14.34□□□□□ -0.11
PTPRA-201ENST00000216877 PPA2Q9H2U2 334 aa14.34□□□□□ -0.11
PTPRA-201ENST00000216877 FAM8A1Q9UBU6 413 aa14.34□□□□□ -0.11
PTPRA-201ENST00000216877 BAIAP2Q9UQB8 552 aa14.34□□□□□ -0.11
PTPRA-201ENST00000216877 PCDHGB2Q9Y5G2 931 aa14.34□□□□□ -0.11
PTPRA-201ENST00000216877 WNT10BO00744 389 aa14.33□□□□□ -0.11
PTPRA-201ENST00000216877 TOXO94900 526 aa14.33□□□□□ -0.11
PTPRA-201ENST00000216877 SNX16P57768 344 aa14.33□□□□□ -0.11
PTPRA-201ENST00000216877 RPP38P78345 283 aaKnown RBP14.33□□□□□ -0.11
PTPRA-201ENST00000216877 ZNF678Q5SXM1 525 aa14.33□□□□□ -0.11
PTPRA-201ENST00000216877 DENND1CQ8IV53 801 aa14.33□□□□□ -0.11
PTPRA-201ENST00000216877 DEFB106AQ8N104 65 aa14.33□□□□□ -0.11
PTPRA-201ENST00000216877 CDC26Q8NHZ8 85 aa14.33□□□□□ -0.11
PTPRA-201ENST00000216877 TMEM174Q8WUU8 243 aa14.33□□□□□ -0.11
PTPRA-201ENST00000216877 SLC5A11Q8WWX8 675 aa14.33□□□□□ -0.11
PTPRA-201ENST00000216877 TMEM203Q969S6 136 aa14.33□□□□□ -0.11
PTPRA-201ENST00000216877 PPP1R2P1Q96PQ5 205 aa14.33□□□□□ -0.11
PTPRA-201ENST00000216877 XYLT2Q9H1B5 865 aa14.33□□□□□ -0.11
PTPRA-201ENST00000216877 DPEP3Q9H4B8 488 aa14.33□□□□□ -0.11
PTPRA-201ENST00000216877 ING4Q9UNL4 249 aa14.33□□□□□ -0.11
PTPRA-201ENST00000216877 ELOVL7A1L3X0 281 aa14.33□□□□□ -0.12
PTPRA-201ENST00000216877 RYKP34925 604 aa14.33□□□□□ -0.12
PTPRA-201ENST00000216877 GPR19Q15760 415 aa14.33□□□□□ -0.12
PTPRA-201ENST00000216877 ATF7IP2Q5U623 682 aa14.33□□□□□ -0.12
PTPRA-201ENST00000216877 KIAA1324Q6UXG2 1013 aaKnown RBP14.33□□□□□ -0.12
PTPRA-201ENST00000216877 MYDGFQ969H8 173 aa14.33□□□□□ -0.12
PTPRA-201ENST00000216877 CDK15Q96Q40 435 aa14.33□□□□□ -0.12
PTPRA-201ENST00000216877 SIK2Q9H0K1 926 aa14.33□□□□□ -0.12
PTPRA-201ENST00000216877 JPH1Q9HDC5 661 aaPredicted RBP14.33□□□□□ -0.12
PTPRA-201ENST00000216877 UBIAD1Q9Y5Z9 338 aa14.33□□□□□ -0.12
PTPRA-201ENST00000216877 PIK3CBP42338 1070 aa14.33□□□□□ -0.12
PTPRA-201ENST00000216877 DNAJB13P59910 316 aa14.33□□□□□ -0.12
PTPRA-201ENST00000216877 ERVK-21P61565 698 aa14.33□□□□□ -0.12
PTPRA-201ENST00000216877 SOWAHAQ2M3V2 549 aa14.33□□□□□ -0.12
PTPRA-201ENST00000216877 NADSYN1Q6IA69 706 aa14.33□□□□□ -0.12
PTPRA-201ENST00000216877 ZBTB18Q99592 522 aa14.33□□□□□ -0.12
PTPRA-201ENST00000216877 MLPHQ9BV36 600 aaPredicted RBP14.33□□□□□ -0.12
PTPRA-201ENST00000216877 CRISPLD1Q9H336 500 aa14.33□□□□□ -0.12
PTPRA-201ENST00000216877 HOXC10Q9NYD6 342 aa14.33□□□□□ -0.12
PTPRA-201ENST00000216877 WASHC1A8K0Z3 465 aa14.32□□□□□ -0.12
PTPRA-201ENST00000216877 FABP7O15540 132 aa14.32□□□□□ -0.12
PTPRA-201ENST00000216877 FOSL1P15407 271 aa14.32□□□□□ -0.12
PTPRA-201ENST00000216877 MAP2K6P52564 334 aa14.32□□□□□ -0.12
PTPRA-201ENST00000216877 VEPH1Q14D04 833 aa14.32□□□□□ -0.12
PTPRA-201ENST00000216877 MAD2L1BPQ15013 274 aaPredicted RBP14.32□□□□□ -0.12
PTPRA-201ENST00000216877 DGLUCYQ7Z3D6 616 aa14.32□□□□□ -0.12
PTPRA-201ENST00000216877 PRSS42Q7Z5A4 293 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms