RNA–Protein interactions for RNA: ENST00000070846.10

PKP2-201, Transcript of plakophilin 2, humanhuman

TSL 1 (best) BASIC

Gene PKP2, Length 4,241 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-201ENST00000070846 STRADBQ9C0K7 418 aa11.14□□□□□ -0.63
PKP2-201ENST00000070846 ACTL7AQ9Y615 435 aa11.14□□□□□ -0.63
PKP2-201ENST00000070846 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.13□□□□□ -0.63
PKP2-201ENST00000070846 A0A1W2PRB8 838 aa11.13□□□□□ -0.63
PKP2-201ENST00000070846 LOC730098B7Z3J9 87 aa11.13□□□□□ -0.63
PKP2-201ENST00000070846 PDPK1O15530 556 aa11.13□□□□□ -0.63
PKP2-201ENST00000070846 SMAD6O43541 496 aaKnown RBP11.13□□□□□ -0.63
PKP2-201ENST00000070846 TGDSO95455 350 aa11.13□□□□□ -0.63
PKP2-201ENST00000070846 DGCR6Q14129 220 aa11.13□□□□□ -0.63
PKP2-201ENST00000070846 WASHC2DQ5SRD0 308 aa11.13□□□□□ -0.63
PKP2-201ENST00000070846 GLYATQ6IB77 296 aa11.13□□□□□ -0.63
PKP2-201ENST00000070846 TSPAN33Q86UF1 283 aa11.13□□□□□ -0.63
PKP2-201ENST00000070846 MR1Q95460 341 aa11.13□□□□□ -0.63
PKP2-201ENST00000070846 TGM7Q96PF1 710 aa11.13□□□□□ -0.63
PKP2-201ENST00000070846 DNMT3BQ9UBC3 853 aaKnown RBP11.13□□□□□ -0.63
PKP2-201ENST00000070846 UGT2B17O75795 530 aa11.13□□□□□ -0.63
PKP2-201ENST00000070846 MT-ND1P03886 318 aa11.13□□□□□ -0.63
PKP2-201ENST00000070846 PRG2P13727 222 aa11.13□□□□□ -0.63
PKP2-201ENST00000070846 ADRB3P13945 408 aa11.13□□□□□ -0.63
PKP2-201ENST00000070846 OXTRP30559 389 aa11.13□□□□□ -0.63
PKP2-201ENST00000070846 NCBP2P52298 156 aaKnown RBP eCLIP11.13□□□□□ -0.63
PKP2-201ENST00000070846 MEF2AQ02078 507 aaPredicted RBP11.13□□□□□ -0.63
PKP2-201ENST00000070846 BNIP2Q12982 314 aa11.13□□□□□ -0.63
PKP2-201ENST00000070846 PCBP2Q15366 365 aaKnown RBP eCLIP11.13□□□□□ -0.63
PKP2-201ENST00000070846 METTL21CQ5VZV1 264 aa11.13□□□□□ -0.63
PKP2-201ENST00000070846 RNF43Q68DV7 783 aa11.13□□□□□ -0.63
PKP2-201ENST00000070846 ZC3H14Q6PJT7 736 aaKnown RBP11.13□□□□□ -0.63
PKP2-201ENST00000070846 LRRC74BQ6ZQY2 392 aa11.13□□□□□ -0.63
PKP2-201ENST00000070846 GPR141Q7Z602 305 aa11.13□□□□□ -0.63
PKP2-201ENST00000070846 TDRPQ86YL5 185 aa11.13□□□□□ -0.63
PKP2-201ENST00000070846 METTL27Q8N6F8 245 aaPredicted RBP11.13□□□□□ -0.63
PKP2-201ENST00000070846 CENPIQ92674 756 aaPredicted RBP11.13□□□□□ -0.63
PKP2-201ENST00000070846 DUSP26Q9BV47 211 aa11.13□□□□□ -0.63
PKP2-201ENST00000070846 KIFC1Q9BW19 673 aa11.13□□□□□ -0.63
PKP2-201ENST00000070846 HCN2Q9UL51 889 aa11.13□□□□□ -0.63
PKP2-201ENST00000070846 TPRKBQ9Y3C4 175 aa11.13□□□□□ -0.63
PKP2-201ENST00000070846 TEX264Q9Y6I9 313 aa11.13□□□□□ -0.63
PKP2-201ENST00000070846 LCHNA4D1U4 455 aa11.13□□□□□ -0.63
PKP2-201ENST00000070846 A8MT66 165 aa11.13□□□□□ -0.63
PKP2-201ENST00000070846 TNFRSF10BO14763 440 aa11.13□□□□□ -0.63
PKP2-201ENST00000070846 KIF1CO43896 1103 aaKnown RBP11.13□□□□□ -0.63
PKP2-201ENST00000070846 KRT8P05787 483 aa11.13□□□□□ -0.63
PKP2-201ENST00000070846 CASRP41180 1078 aa11.13□□□□□ -0.63
PKP2-201ENST00000070846 HERVK_113P63132 956 aa11.13□□□□□ -0.63
PKP2-201ENST00000070846 DSC1Q08554 894 aa11.13□□□□□ -0.63
PKP2-201ENST00000070846 NR1D2Q14995 579 aa11.13□□□□□ -0.63
PKP2-201ENST00000070846 GCNT6Q5T4J0 391 aa11.13□□□□□ -0.63
PKP2-201ENST00000070846 PAOXQ6QHF9 649 aa11.13□□□□□ -0.63
PKP2-201ENST00000070846 ZNF730Q6ZMV8 503 aa11.13□□□□□ -0.63
PKP2-201ENST00000070846 MRGPRX2Q96LB1 330 aa11.13□□□□□ -0.63
PKP2-201ENST00000070846 C7orf26Q96N11 449 aa11.13□□□□□ -0.63
PKP2-201ENST00000070846 TEFMQ96QE5 360 aaKnown RBP11.13□□□□□ -0.63
PKP2-201ENST00000070846 TAPBPLQ9BX59 468 aa11.13□□□□□ -0.63
PKP2-201ENST00000070846 ERVK-6Q9BXR3 956 aa11.13□□□□□ -0.63
PKP2-201ENST00000070846 RBCK1Q9BYM8 510 aa11.13□□□□□ -0.63
PKP2-201ENST00000070846 TBL1XR1Q9BZK7 514 aa11.13□□□□□ -0.63
PKP2-201ENST00000070846 ELL3Q9HB65 397 aaPredicted RBP11.13□□□□□ -0.63
PKP2-201ENST00000070846 CD248Q9HCU0 757 aa11.13□□□□□ -0.63
PKP2-201ENST00000070846 ZC4H2Q9NQZ6 224 aa11.13□□□□□ -0.63
PKP2-201ENST00000070846 PSAT1Q9Y617 370 aa11.13□□□□□ -0.63
PKP2-201ENST00000070846 ICE1Q9Y2F5 2266 aa11.13□□□□□ -0.63
PKP2-201ENST00000070846 OR5K4A6NMS3 321 aa11.12□□□□□ -0.63
PKP2-201ENST00000070846 H0YGN5 161 aa11.12□□□□□ -0.63
PKP2-201ENST00000070846 HNRNPH1P31943 449 aaKnown RBP11.12□□□□□ -0.63
PKP2-201ENST00000070846 SHMT2P34897 504 aa11.12□□□□□ -0.63
PKP2-201ENST00000070846 NIPAL4Q0D2K0 466 aa11.12□□□□□ -0.63
PKP2-201ENST00000070846 EPS8Q12929 822 aa11.12□□□□□ -0.63
PKP2-201ENST00000070846 NEDD8Q15843 81 aa11.12□□□□□ -0.63
PKP2-201ENST00000070846 HNRNPA1L2Q32P51 320 aaKnown RBP11.12□□□□□ -0.63
PKP2-201ENST00000070846 TANGO2Q6ICL3 276 aa11.12□□□□□ -0.63
PKP2-201ENST00000070846 ANKRD33Q7Z3H0 272 aa11.12□□□□□ -0.63
PKP2-201ENST00000070846 TMC8Q8IU68 726 aa11.12□□□□□ -0.63
PKP2-201ENST00000070846 FBXW8Q8N3Y1 598 aa11.12□□□□□ -0.63
PKP2-201ENST00000070846 OR10H5Q8NGA6 315 aa11.12□□□□□ -0.63
PKP2-201ENST00000070846 CMTM7Q96FZ5 175 aa11.12□□□□□ -0.63
PKP2-201ENST00000070846 ZDHHC12Q96GR4 267 aa11.12□□□□□ -0.63
PKP2-201ENST00000070846 HOPXQ9BPY8 73 aaPredicted RBP11.12□□□□□ -0.63
PKP2-201ENST00000070846 FTSJ1Q9UET6 329 aa11.12□□□□□ -0.63
PKP2-201ENST00000070846 GMPPBQ9Y5P6 360 aa11.12□□□□□ -0.63
PKP2-201ENST00000070846 MAGEB17A8MXT2 336 aa11.12□□□□□ -0.63
PKP2-201ENST00000070846 NPC1O15118 1278 aa11.12□□□□□ -0.63
PKP2-201ENST00000070846 CLPTM1O96005 669 aa11.12□□□□□ -0.63
PKP2-201ENST00000070846 ALOX5P09917 674 aa11.12□□□□□ -0.63
PKP2-201ENST00000070846 PIM1P11309 404 aaPredicted RBP11.12□□□□□ -0.63
PKP2-201ENST00000070846 IMPDH1P20839 514 aa11.12□□□□□ -0.63
PKP2-201ENST00000070846 MAOBP27338 520 aa11.12□□□□□ -0.63
PKP2-201ENST00000070846 SLC7A1P30825 629 aa11.12□□□□□ -0.63
PKP2-201ENST00000070846 YAP1P46937 504 aaKnown RBP11.12□□□□□ -0.63
PKP2-201ENST00000070846 TGFBIQ15582 683 aa11.12□□□□□ -0.63
PKP2-201ENST00000070846 FAM78AQ5JUQ0 283 aa11.12□□□□□ -0.63
PKP2-201ENST00000070846 BANPQ8N9N5 519 aa11.12□□□□□ -0.63
PKP2-201ENST00000070846 TRPV3Q8NET8 790 aa11.12□□□□□ -0.63
PKP2-201ENST00000070846 RORBQ92753 470 aa11.12□□□□□ -0.63
PKP2-201ENST00000070846 SLCO2A1Q92959 643 aa11.12□□□□□ -0.63
PKP2-201ENST00000070846 MRPL38Q96DV4 380 aaKnown RBP11.12□□□□□ -0.63
PKP2-201ENST00000070846 IL17FQ96PD4 163 aa11.12□□□□□ -0.63
PKP2-201ENST00000070846 MYCBPQ99417 103 aaPredicted RBP11.12□□□□□ -0.63
PKP2-201ENST00000070846 OR8D2Q9GZM6 311 aa11.12□□□□□ -0.63
PKP2-201ENST00000070846 RETREG1Q9H6L5 497 aa11.12□□□□□ -0.63
PKP2-201ENST00000070846 TRIM39Q9HCM9 518 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms