RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 AFF4Q9UHB7 1163 aaKnown RBP13.7□□□□□ -0.22
USH1C-201ENST00000005226 POU2F3Q9UKI9 436 aa13.7□□□□□ -0.22
USH1C-201ENST00000005226 TNPO3Q9Y5L0 923 aaKnown RBP13.7□□□□□ -0.22
USH1C-201ENST00000005226 NT5C1B-RDH14C9J2C7 533 aa13.7□□□□□ -0.22
USH1C-201ENST00000005226 MANBAO00462 879 aa13.7□□□□□ -0.22
USH1C-201ENST00000005226 MYO1DO94832 1006 aa13.7□□□□□ -0.22
USH1C-201ENST00000005226 KLKB1P03952 638 aa13.7□□□□□ -0.22
USH1C-201ENST00000005226 CCDC159P0C7I6 412 aa13.7□□□□□ -0.22
USH1C-201ENST00000005226 GKP32189 559 aa13.7□□□□□ -0.22
USH1C-201ENST00000005226 RYKP34925 604 aa13.7□□□□□ -0.22
USH1C-201ENST00000005226 SLC35A2P78381 396 aa13.7□□□□□ -0.22
USH1C-201ENST00000005226 FOXD4Q12950 439 aaPredicted RBP13.7□□□□□ -0.22
USH1C-201ENST00000005226 DGUOKQ16854 277 aa13.7□□□□□ -0.22
USH1C-201ENST00000005226 DYNC2LI1Q8TCX1 351 aa13.7□□□□□ -0.22
USH1C-201ENST00000005226 ULK4Q96C45 1275 aa13.7□□□□□ -0.22
USH1C-201ENST00000005226 UROC1Q96N76 676 aa13.7□□□□□ -0.22
USH1C-201ENST00000005226 CPPED1Q9BRF8 314 aaPredicted RBP13.7□□□□□ -0.22
USH1C-201ENST00000005226 SERHLQ9NQF3 203 aa13.7□□□□□ -0.22
USH1C-201ENST00000005226 GMPPBQ9Y5P6 360 aa13.7□□□□□ -0.22
USH1C-201ENST00000005226 TRBV5-3A0A0A0MS03 114 aa13.7□□□□□ -0.22
USH1C-201ENST00000005226 IFRD1O00458 451 aaPredicted RBP13.7□□□□□ -0.22
USH1C-201ENST00000005226 FAM20BO75063 409 aa13.7□□□□□ -0.22
USH1C-201ENST00000005226 VNN2O95498 520 aa13.7□□□□□ -0.22
USH1C-201ENST00000005226 IL6P05231 212 aa13.7□□□□□ -0.22
USH1C-201ENST00000005226 CLCN4P51793 760 aa13.7□□□□□ -0.22
USH1C-201ENST00000005226 ARHGEF7Q14155 803 aa13.7□□□□□ -0.22
USH1C-201ENST00000005226 HIST2H2ACQ16777 129 aaPredicted RBP13.7□□□□□ -0.22
USH1C-201ENST00000005226 USP39Q53GS9 565 aaKnown RBP13.7□□□□□ -0.22
USH1C-201ENST00000005226 AHSA2Q719I0 299 aa13.7□□□□□ -0.22
USH1C-201ENST00000005226 ADAMTSL2Q86TH1 951 aa13.7□□□□□ -0.22
USH1C-201ENST00000005226 VMP1Q96GC9 406 aa13.7□□□□□ -0.22
USH1C-201ENST00000005226 ZNF300Q96RE9 604 aaPredicted RBP13.7□□□□□ -0.22
USH1C-201ENST00000005226 YIPF2Q9BWQ6 316 aa13.7□□□□□ -0.22
USH1C-201ENST00000005226 TNKS2Q9H2K2 1166 aa13.7□□□□□ -0.22
USH1C-201ENST00000005226 ITM2CQ9NQX7 267 aa13.7□□□□□ -0.22
USH1C-201ENST00000005226 PDP1Q9P0J1 537 aaPredicted RBP13.7□□□□□ -0.22
USH1C-201ENST00000005226 SCHIP1Q9P0W5 487 aaPredicted RBP13.7□□□□□ -0.22
USH1C-201ENST00000005226 ZNF229Q9UJW7 825 aa13.7□□□□□ -0.22
USH1C-201ENST00000005226 PPT2Q9UMR5 302 aa13.7□□□□□ -0.22
USH1C-201ENST00000005226 VPS9D1Q9Y2B5 631 aa13.7□□□□□ -0.22
USH1C-201ENST00000005226 FCF1Q9Y324 198 aaKnown RBP13.7□□□□□ -0.22
USH1C-201ENST00000005226 TSC22D4Q9Y3Q8 395 aa13.7□□□□□ -0.22
USH1C-201ENST00000005226 FAM32AQ9Y421 112 aaKnown RBP13.7□□□□□ -0.22
USH1C-201ENST00000005226 TRPM7Q96QT4 1865 aa13.69□□□□□ -0.22
USH1C-201ENST00000005226 TTC34A8MYJ7 566 aa13.69□□□□□ -0.22
USH1C-201ENST00000005226 K7ERQ8 282 aa13.69□□□□□ -0.22
USH1C-201ENST00000005226 PFDN6O15212 129 aa13.69□□□□□ -0.22
USH1C-201ENST00000005226 SEC24AO95486 1093 aa13.69□□□□□ -0.22
USH1C-201ENST00000005226 CD160O95971 181 aa13.69□□□□□ -0.22
USH1C-201ENST00000005226 NRIP1P48552 1158 aa13.69□□□□□ -0.22
USH1C-201ENST00000005226 NKX2-5P52952 324 aaPredicted RBP13.69□□□□□ -0.22
USH1C-201ENST00000005226 ARF5P84085 180 aa13.69□□□□□ -0.22
USH1C-201ENST00000005226 KCNJ8Q15842 424 aa13.69□□□□□ -0.22
USH1C-201ENST00000005226 ZCCHC8Q6NZY4 707 aaKnown RBP13.69□□□□□ -0.22
USH1C-201ENST00000005226 GLB1LQ6UWU2 654 aa13.69□□□□□ -0.22
USH1C-201ENST00000005226 HIPK1Q86Z02 1210 aa13.69□□□□□ -0.22
USH1C-201ENST00000005226 CCDC71Q8IV32 467 aaPredicted RBP13.69□□□□□ -0.22
USH1C-201ENST00000005226 LGALS12Q96DT0 336 aa13.69□□□□□ -0.22
USH1C-201ENST00000005226 FUBP3Q96I24 572 aaKnown RBP eCLIP13.69□□□□□ -0.22
USH1C-201ENST00000005226 ZNF641Q96N77 438 aaPredicted RBP13.69□□□□□ -0.22
USH1C-201ENST00000005226 DPH2Q9BQC3 489 aaPredicted RBP13.69□□□□□ -0.22
USH1C-201ENST00000005226 ACPTQ9BZG2 426 aa13.69□□□□□ -0.22
USH1C-201ENST00000005226 CD244Q9BZW8 370 aa13.69□□□□□ -0.22
USH1C-201ENST00000005226 CLPBQ9H078 707 aa13.69□□□□□ -0.22
USH1C-201ENST00000005226 SIRT5Q9NXA8 310 aa13.69□□□□□ -0.22
USH1C-201ENST00000005226 IL37Q9NZH6 218 aa13.69□□□□□ -0.22
USH1C-201ENST00000005226 IL17CQ9P0M4 197 aa13.69□□□□□ -0.22
USH1C-201ENST00000005226 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.69□□□□□ -0.22
USH1C-201ENST00000005226 GPC6Q9Y625 555 aaPredicted RBP13.69□□□□□ -0.22
USH1C-201ENST00000005226 A0A1W2PQ67 120 aa13.69□□□□□ -0.22
USH1C-201ENST00000005226 PDYNP01213 254 aa13.69□□□□□ -0.22
USH1C-201ENST00000005226 RETP07949 1114 aa13.69□□□□□ -0.22
USH1C-201ENST00000005226 AKR1A1P14550 325 aa13.69□□□□□ -0.22
USH1C-201ENST00000005226 ACVR2AP27037 513 aa13.69□□□□□ -0.22
USH1C-201ENST00000005226 S100A3P33764 101 aa13.69□□□□□ -0.22
USH1C-201ENST00000005226 TPTEP56180 551 aa13.69□□□□□ -0.22
USH1C-201ENST00000005226 MVKQ03426 396 aa13.69□□□□□ -0.22
USH1C-201ENST00000005226 CALHM3Q86XJ0 350 aa13.69□□□□□ -0.22
USH1C-201ENST00000005226 PAF1Q8N7H5 531 aa13.69□□□□□ -0.22
USH1C-201ENST00000005226 TTC29Q8NA56 475 aaPredicted RBP13.69□□□□□ -0.22
USH1C-201ENST00000005226 ADGRE3Q9BY15 652 aa13.69□□□□□ -0.22
USH1C-201ENST00000005226 ASPSCR1Q9BZE9 553 aa13.69□□□□□ -0.22
USH1C-201ENST00000005226 TM6SF2Q9BZW4 377 aa13.69□□□□□ -0.22
USH1C-201ENST00000005226 DUSP21Q9H596 190 aa13.69□□□□□ -0.22
USH1C-201ENST00000005226 PARVBQ9HBI1 364 aa13.69□□□□□ -0.22
USH1C-201ENST00000005226 LATS2Q9NRM7 1088 aa13.69□□□□□ -0.22
USH1C-201ENST00000005226 OLA1Q9NTK5 396 aaKnown RBP13.69□□□□□ -0.22
USH1C-201ENST00000005226 ZNF451Q9Y4E5 1061 aa13.69□□□□□ -0.22
USH1C-201ENST00000005226 SLC22A1O15245 554 aa13.68□□□□□ -0.22
USH1C-201ENST00000005226 PRAMEF1O95521 474 aa13.68□□□□□ -0.22
USH1C-201ENST00000005226 OXSR1O95747 527 aaPredicted RBP13.68□□□□□ -0.22
USH1C-201ENST00000005226 CD36P16671 472 aa13.68□□□□□ -0.22
USH1C-201ENST00000005226 MZF1P28698 734 aaPredicted RBP13.68□□□□□ -0.22
USH1C-201ENST00000005226 HOXA9P31269 272 aa13.68□□□□□ -0.22
USH1C-201ENST00000005226 GATMP50440 423 aa13.68□□□□□ -0.22
USH1C-201ENST00000005226 HUNKP57058 714 aa13.68□□□□□ -0.22
USH1C-201ENST00000005226 VLDLRP98155 873 aa13.68□□□□□ -0.22
USH1C-201ENST00000005226 ILF2Q12905 390 aaKnown RBP13.68□□□□□ -0.22
USH1C-201ENST00000005226 SF1Q15637 639 aaKnown RBP13.68□□□□□ -0.22
USH1C-201ENST00000005226 SOWAHCQ53LP3 525 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms