RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 Crhr2Q60748 411 aa12.97□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 IpmkQ7TT16 396 aa12.97□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Q810N5 247 aa12.97□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Pphln1Q8K2H1 381 aaKnown RBP12.97□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Nrif1Q923B3 828 aa12.97□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Nudt7Q99P30 236 aa12.97□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Bbs2Q9CWF6 721 aa12.97□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Fbxl20Q9CZV8 436 aa12.97□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Wdr53Q9DB94 358 aa12.97□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Wdr12Q9JJA4 423 aa12.97□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Gm42688A0A0R3P9D1 673 aa12.97□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Ifit3bE9PV48 403 aa12.97□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Krt83E9Q1Y9 479 aa12.97□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Atn1O35126 1175 aa12.97□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Smad6O35182 495 aa12.97□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Sult3a1O35403 293 aa12.97□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Pld3O35405 488 aa12.97□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Slc22a8O88909 537 aa12.97□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Cbx3P23198 183 aaKnown RBP12.97□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Kcna7Q17ST2 489 aa12.97□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Sec31bQ3TZ89 1158 aa12.97□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Glb1l2Q3UPY5 636 aa12.97□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Rassf5Q5EBH1 413 aa12.97□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Klhl23Q6GQU2 558 aa12.97□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Adam29Q811Q4 763 aa12.97□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Cept1Q8BGS7 416 aa12.97□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Fam131aQ8BWU3 361 aa12.97□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Tmem72Q8C3K5 275 aa12.97□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Ccdc142Q8CAI1 738 aa12.97□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Rnf8Q8VC56 488 aa12.97□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Klrb1fQ8VD98 217 aa12.97□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Col26a1Q91VF6 440 aa12.97□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Pcdhb8Q91XZ2 779 aa12.97□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Acbd7Q9D258 88 aa12.97□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Gpn3Q9D3W4 284 aa12.97□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Chrnb2Q9ERK7 501 aa12.97□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Prl5a1Q9JII2 230 aa12.97□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Dctn3Q9Z0Y1 186 aa12.97□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Cep295Q8BQ48 2412 aa12.96□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Ankrd34aB2RW11 495 aa12.96□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Olfr620E9PZ66 313 aa12.96□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Fbrsl1E9Q9T0 1031 aa12.96□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Tsga10ipF7A1F0 157 aa12.96□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Gm29394H3BIW7 199 aa12.96□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Gm6502L7N456 481 aa12.96□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Phkg1P07934 388 aa12.96□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Hyal4Q05A56 481 aa12.96□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Mrpl10Q3TBW2 262 aaKnown RBP12.96□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Znf385bQ8BXJ8 482 aaKnown RBP12.96□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 RorbQ8R1B8 470 aa12.96□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 KptnQ8VCX6 430 aa12.96□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Atp13a2Q9CTG6 1169 aa12.96□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Psmd8Q9CX56 353 aa12.96□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 TrmuQ9DAT5 417 aa12.96□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Dusp6Q9DBB1 381 aa12.96□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Plscr2Q9DCW2 307 aa12.96□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Olfr1153A2AVC0 318 aa12.96□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Vmn2r96E9PZU5 664 aa12.96□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Gnao1P18872 354 aa12.96□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 PrkacbP68181 351 aa12.96□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Rpl10lP86048 214 aaKnown RBP12.96□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Rad51Q08297 339 aa12.96□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Pcbp2Q61990 362 aaKnown RBP12.96□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Nudcd1Q6PIP5 582 aa12.96□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Rpl10Q6ZWV3 214 aaKnown RBP12.96□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Olfr735Q7TRM4 354 aa12.96□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Slc46a2Q8CA03 479 aa12.96□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Pgm2l1Q8CAA7 621 aa12.96□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Bloc1s5Q8R015 185 aa12.96□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Adap2Q8R2V5 381 aa12.96□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Ints14Q8R3P6 515 aa12.96□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 HpgdQ8VCC1 269 aa12.96□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Fam96aQ9DCL2 160 aa12.96□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Rdh11Q9QYF1 316 aa12.96□□□□□ -0.33
Pdgfra-205ENSMUST00000201711 Cldn34b1B1AZQ8 209 aa12.96□□□□□ -0.34
Pdgfra-205ENSMUST00000201711 Gm3642K7N6V4 267 aa12.96□□□□□ -0.34
Pdgfra-205ENSMUST00000201711 Vmn2r46L7N282 809 aa12.96□□□□□ -0.34
Pdgfra-205ENSMUST00000201711 Zw10O54692 779 aa12.96□□□□□ -0.34
Pdgfra-205ENSMUST00000201711 Ltb4rO88855 351 aa12.96□□□□□ -0.34
Pdgfra-205ENSMUST00000201711 Fv4P11370 679 aa12.96□□□□□ -0.34
Pdgfra-205ENSMUST00000201711 Ptger3P30557 365 aa12.96□□□□□ -0.34
Pdgfra-205ENSMUST00000201711 Inpp5jP59644 1003 aa12.96□□□□□ -0.34
Pdgfra-205ENSMUST00000201711 PtnP63089 168 aa12.96□□□□□ -0.34
Pdgfra-205ENSMUST00000201711 D13Ertd608eQ3UPR8 151 aa12.96□□□□□ -0.34
Pdgfra-205ENSMUST00000201711 Awat2Q6E1M8 333 aa12.96□□□□□ -0.34
Pdgfra-205ENSMUST00000201711 Taf1cQ6PDZ2 836 aa12.96□□□□□ -0.34
Pdgfra-205ENSMUST00000201711 Cfap206Q6PE87 622 aa12.96□□□□□ -0.34
Pdgfra-205ENSMUST00000201711 Ppp2r1bQ7TNP2 601 aaKnown RBP12.96□□□□□ -0.34
Pdgfra-205ENSMUST00000201711 AftphQ80WT5 931 aa12.96□□□□□ -0.34
Pdgfra-205ENSMUST00000201711 Ptgr2Q8VDQ1 351 aa12.96□□□□□ -0.34
Pdgfra-205ENSMUST00000201711 Olfr693Q8VF89 316 aa12.96□□□□□ -0.34
Pdgfra-205ENSMUST00000201711 Sult5a1Q91X36 291 aa12.96□□□□□ -0.34
Pdgfra-205ENSMUST00000201711 Fam32aQ9CR80 112 aaKnown RBP12.96□□□□□ -0.34
Pdgfra-205ENSMUST00000201711 Ist1Q9CX00 362 aa12.96□□□□□ -0.34
Pdgfra-205ENSMUST00000201711 RtcAQ9D7H3 366 aa12.96□□□□□ -0.34
Pdgfra-205ENSMUST00000201711 Cldn34b2Q9D9N2 209 aa12.96□□□□□ -0.34
Pdgfra-205ENSMUST00000201711 Ift46Q9DB07 301 aa12.96□□□□□ -0.34
Pdgfra-205ENSMUST00000201711 Slc19a2Q9EQN9 498 aa12.96□□□□□ -0.34
Pdgfra-205ENSMUST00000201711 PyglQ9ET01 850 aa12.96□□□□□ -0.34
Pdgfra-205ENSMUST00000201711 Baz2bA2AUY4 2123 aa12.95□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 27.8 ms