RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Fam129bQ8R1F1 749 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Krcc1Q99JT5 256 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 3110001I22RikQ9CZ70 312 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Clec2gQ9D676 269 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Rtl8cQ9D6I0 112 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 SqorQ9R112 450 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Sh3pxd2bA2AAY5 908 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 AipO08915 330 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Ptpn20O55082 426 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Sbk2P0C5K1 362 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 OstnP61364 130 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Tgm3Q08189 693 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Brsk1Q5RJI5 778 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Grsf1Q8C5Q4 479 aaKnown RBP13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Cnot11Q9CWN7 505 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Olfr938Q9EQ93 315 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Clec2iQ9WVF9 217 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Nr4a1P12813 601 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Ctps1P70698 591 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Spock1Q62288 442 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Ift52Q62559 426 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Fndc3bQ6NWW9 1207 aaKnown RBP13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Pgm2Q7TSV4 620 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Gabbr2Q80T41 940 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Ptk7Q8BKG3 1062 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Fam221bQ8C627 487 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Zbtb26Q8C8S0 451 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Tmem259Q8CIV2 574 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Tmem203Q8R235 136 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 FktnQ8R507 461 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Slc15a4Q91W98 574 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Tmed9Q99KF1 235 aaKnown RBP13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Hsd17b2P51658 381 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Gng2P63213 71 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Tmem173Q3TBT3 378 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Jak2Q62120 1129 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Kcnk10Q8BUW1 535 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Samd14Q8K070 417 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Cuedc1Q8R3V6 388 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 LsrQ99KG5 594 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Ranbp3Q9CT10 491 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 EqtnQ9D9V2 337 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Psma6Q9QUM9 246 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Maged1Q9QYH6 775 aaKnown RBP13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Cyp2w1E9Q816 493 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Slc6a6O35316 621 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Abcg1Q64343 666 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Rap2aQ80ZJ1 183 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Stx16Q8BVI5 326 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 PpcdcQ8BZB2 204 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Atat1Q8K341 421 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Vmn1r203Q8R273 311 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 PompQ9CQT5 141 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 AnkhQ9JHZ2 492 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Hspb3Q9QZ57 154 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Adam25Q9R159 760 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Cyp2a22B2RXZ2 492 aa13.71□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Vmn2r57L7N269 863 aa13.71□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Has3O08650 554 aa13.71□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Kcnj12P52187 427 aa13.71□□□□□ -0.21
Col5a1-201ENSMUST00000028280 TceancQ3US16 359 aa13.71□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Slx1bQ8BX32 270 aa13.71□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Setd7Q8VHL1 366 aa13.71□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Pak1ip1Q9DCE5 382 aaKnown RBP13.71□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Pex14Q9R0A0 376 aa13.71□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Olfr391-psA0A0U1RNJ4 312 aa13.71□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Mkrn2osD3Z393 217 aa13.71□□□□□ -0.21
Col5a1-201ENSMUST00000028280 ChkaO54804 453 aa13.71□□□□□ -0.21
Col5a1-201ENSMUST00000028280 IspdQ5RJG7 447 aa13.71□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Fbxl3Q8C4V4 428 aa13.71□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Dctn4Q8CBY8 467 aa13.71□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Avpr1bQ9WU02 421 aa13.71□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Bclaf3A2AG58 752 aaKnown RBP13.71□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Lipo4D3Z608 396 aa13.71□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Ctps2P70303 586 aa13.71□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Gch1Q05915 241 aa13.71□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Slc6a7Q6PGE7 637 aa13.71□□□□□ -0.21
Col5a1-201ENSMUST00000028280 SdslQ8R238 329 aa13.71□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Ogfrl1Q8VE52 464 aa13.71□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Ankrd61Q9CQM6 421 aa13.71□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Prokr1Q9JKL1 393 aa13.71□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Map3k14Q9WUL6 942 aa13.71□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Astn1Q61137 1302 aa13.71□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Vmn2r90E9PXJ8 863 aa13.71□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Fam181aJ3QNB7 292 aa13.71□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Itih5Q8BJD1 952 aa13.71□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Sp110Q8BVK9 445 aa13.71□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Lurap1lQ8K2P1 221 aa13.71□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Klk6Q91Y82 253 aa13.71□□□□□ -0.21
Col5a1-201ENSMUST00000028280 MpstQ99J99 297 aa13.71□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Rgs20Q9QZB1 239 aa13.71□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Ighv11-2A0A075B5R8 117 aa13.71□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Vmn1r223Q5SSA0 361 aa13.71□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Orm3Q63805 206 aa13.71□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Olfr814Q7TRH4 310 aa13.71□□□□□ -0.22
Col5a1-201ENSMUST00000028280 PpatQ8CIH9 517 aa13.71□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Adgrf1Q8VEC3 908 aa13.71□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Mbd1Q9Z2E2 636 aa13.71□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Spaca6E9Q8Q8 339 aa13.71□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Olfr681Q3SXH8 315 aa13.71□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 31.3 ms