RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Ubap2Q91VX2 1132 aaKnown RBP10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 DcxrQ91X52 244 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Aco2Q99KI0 780 aaKnown RBP10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 PgcQ9D7R7 392 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Fgf22Q9ESS2 162 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Epb41l1Q9Z2H5 879 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 DnpepQ9Z2W0 473 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Trmt1lA2RSY6 728 aaKnown RBP10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 EXOC1LB9EK06 172 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 C7D3YXF5 845 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Prdm14E9Q3T6 561 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Zw10O54692 779 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 NfkbieO54910 364 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Orm2P07361 207 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Uba1Q02053 1058 aaKnown RBP10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Cpa6Q5U901 438 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Serpina12Q7TMF5 413 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Kctd13Q8BGV7 329 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Q8BL95 290 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Zc2hc1cQ8CCG1 527 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Tbc1d14Q8CGA2 694 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Gin1Q8K259 518 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Col26a1Q91VF6 440 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Tmem98Q91X86 226 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Marc2Q922Q1 338 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Mrps33Q9D2R8 106 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Adad2Q9D5P4 478 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Slc22a17Q9D9E0 401 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Cyp3a44Q9EQW4 504 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Il22bQ9JJY8 179 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 GabrqQ9JLF1 638 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Ap1m2Q9WVP1 423 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Glipr1l3A0A1W2P7V2 236 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Pros1Q08761 675 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Cdkl4Q3TZA2 342 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Q3U7U4 132 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Scgb2b2Q6UGQ3 114 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Tas2r106Q7M724 308 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 H2-M10.2Q85ZW9 329 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Sec22cQ8BXT9 303 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Grsf1Q8C5Q4 479 aaKnown RBP10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Fem1cQ8CEF1 617 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Mterf1aQ8CHZ9 379 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Slc29a4Q8R139 528 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Mmgt2Q8R3L0 123 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Chst15Q91XQ5 561 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Abcb8Q9CXJ4 717 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Stap1Q9JM90 297 aaKnown RBP10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Adam24Q9R160 761 aa10.66□□□□□ -0.7
Msh3-201ENSMUST00000022220 Ttll8A4Q9F1 832 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Gm5478D3Z6R0 159 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Pate1E9Q658 125 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Ccdc149F6V035 524 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Vmn1r76F8VQ63 324 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Rhox2gL7MUB9 191 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Vmn2r57L7N269 863 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 AldoaP05064 364 aaKnown RBP10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Apoa1Q00623 264 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 DmwdQ08274 665 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Zfp658Q5PPQ4 887 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Il15raQ60819 263 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 CilpQ66K08 1184 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Rapgefl1Q68EF8 662 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Ppp1r26Q6A025 1163 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Paqr6Q6TCG5 343 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Trmt2bQ8BQJ6 493 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 TiparpQ8C1B2 657 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 FggQ8VCM7 436 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Scd3Q99PL7 359 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Il23aQ9EQ14 196 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Gde1Q9JL56 331 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 CtsjQ9R014 334 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 AadatQ9WVM8 425 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Gm21885A0A286YDN8 145 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Lgr4A2ARI4 951 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Tmem233D3Z1U7 110 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Adam19O35674 920 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Vbp1P61759 196 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Tmem184cQ3TPR7 525 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Mgat5bQ765H6 792 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Fam83eQ80XS7 481 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Yipf4Q8C407 246 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Coq9Q8K1Z0 313 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Aim2Q91VJ1 354 aaKnown RBP10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Mapk8Q91Y86 384 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 BollQ924M5 281 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Cryl1Q99KP3 319 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Ubqln5Q9D4I8 510 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Vmn1r65Q9EPS7 332 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Fbxl12Q9EPX5 326 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Tor1bQ9ER41 336 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Carm1Q9WVG6 608 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Tnfrsf14A0A1W2P7D5 276 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Ccnb1ip1D3Z3K2 276 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Fam124aD3Z5V4 536 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 BC049352E9Q2Z6 85 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 SmgcF6VRN1 385 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Obox5G3X9P6 291 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Vmn2r46L7N282 809 aa10.65□□□□□ -0.7
Msh3-201ENSMUST00000022220 Pbx2O35984 430 aa10.65□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 37.6 ms