RNA–Protein interactions for RNA: ENSMUST00000013771.14

Trim54-201, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim54, Length 1,434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-201ENSMUST00000013771 Lrit3W8DXL4 681 aa16.44■□□□□ 0.22
Trim54-201ENSMUST00000013771 Espl1P60330 2118 aa16.43■□□□□ 0.22
Trim54-201ENSMUST00000013771 RelnQ60841 3461 aa16.43■□□□□ 0.22
Trim54-201ENSMUST00000013771 Olfr566A0A1B0GST0 319 aa16.43■□□□□ 0.22
Trim54-201ENSMUST00000013771 Gm12248A0A1W2P8B8 313 aa16.43■□□□□ 0.22
Trim54-201ENSMUST00000013771 Grin3aA2AIR5 1135 aa16.43■□□□□ 0.22
Trim54-201ENSMUST00000013771 Gm5936A2BG95 728 aa16.43■□□□□ 0.22
Trim54-201ENSMUST00000013771 Gm5640A3KG49 728 aa16.43■□□□□ 0.22
Trim54-201ENSMUST00000013771 1700017D01RikG5E851 209 aa16.43■□□□□ 0.22
Trim54-201ENSMUST00000013771 Znf683I7HJS4 458 aa16.43■□□□□ 0.22
Trim54-201ENSMUST00000013771 Slc6a18O88576 615 aa16.43■□□□□ 0.22
Trim54-201ENSMUST00000013771 Ccr3P51678 359 aa16.43■□□□□ 0.22
Trim54-201ENSMUST00000013771 Pold1P52431 1105 aa16.43■□□□□ 0.22
Trim54-201ENSMUST00000013771 ElnP54320 860 aa16.43■□□□□ 0.22
Trim54-201ENSMUST00000013771 NrgnP60761 78 aa16.43■□□□□ 0.22
Trim54-201ENSMUST00000013771 QrfprP83861 433 aa16.43■□□□□ 0.22
Trim54-201ENSMUST00000013771 Hk3Q3TRM8 922 aa16.43■□□□□ 0.22
Trim54-201ENSMUST00000013771 Ifnl2Q4VK74 193 aa16.43■□□□□ 0.22
Trim54-201ENSMUST00000013771 Gbp4Q61107 620 aa16.43■□□□□ 0.22
Trim54-201ENSMUST00000013771 CpQ61147 1061 aa16.43■□□□□ 0.22
Trim54-201ENSMUST00000013771 Ephx4Q6IE26 359 aa16.43■□□□□ 0.22
Trim54-201ENSMUST00000013771 Parp6Q6P6P7 630 aa16.43■□□□□ 0.22
Trim54-201ENSMUST00000013771 Ubp1Q811S7 540 aa16.43■□□□□ 0.22
Trim54-201ENSMUST00000013771 Pak5Q8C015 719 aa16.43■□□□□ 0.22
Trim54-201ENSMUST00000013771 SowahcQ8C0J6 512 aa16.43■□□□□ 0.22
Trim54-201ENSMUST00000013771 Ces2cQ91WG0 561 aa16.43■□□□□ 0.22
Trim54-201ENSMUST00000013771 Pcdhga4Q91XY4 930 aa16.43■□□□□ 0.22
Trim54-201ENSMUST00000013771 Pcdha5Q91Y15 934 aa16.43■□□□□ 0.22
Trim54-201ENSMUST00000013771 Rin1Q921Q7 763 aa16.43■□□□□ 0.22
Trim54-201ENSMUST00000013771 Atad3Q925I1 591 aa16.43■□□□□ 0.22
Trim54-201ENSMUST00000013771 Nudt17Q9CWD3 296 aa16.43■□□□□ 0.22
Trim54-201ENSMUST00000013771 Acad8Q9D7B6 413 aa16.43■□□□□ 0.22
Trim54-201ENSMUST00000013771 Mcemp1Q9D8U6 183 aa16.43■□□□□ 0.22
Trim54-201ENSMUST00000013771 Iqcf1Q9D9K8 182 aa16.43■□□□□ 0.22
Trim54-201ENSMUST00000013771 Smad9Q9JIW5 430 aa16.43■□□□□ 0.22
Trim54-201ENSMUST00000013771 Lhx9Q9WUH2 397 aa16.43■□□□□ 0.22
Trim54-201ENSMUST00000013771 Mroh7A2AVR2 1279 aa16.42■□□□□ 0.22
Trim54-201ENSMUST00000013771 Gm4787B2RUD9 748 aa16.42■□□□□ 0.22
Trim54-201ENSMUST00000013771 Siah3B2RWG3 268 aa16.42■□□□□ 0.22
Trim54-201ENSMUST00000013771 Zw10O54692 779 aa16.42■□□□□ 0.22
Trim54-201ENSMUST00000013771 NmbrO54799 390 aa16.42■□□□□ 0.22
Trim54-201ENSMUST00000013771 Ldb2O55203 373 aa16.42■□□□□ 0.22
Trim54-201ENSMUST00000013771 Klc1O88447 541 aa16.42■□□□□ 0.22
Trim54-201ENSMUST00000013771 Vipr2P41588 437 aa16.42■□□□□ 0.22
Trim54-201ENSMUST00000013771 Tlx1P43345 332 aa16.42■□□□□ 0.22
Trim54-201ENSMUST00000013771 PhbP67778 272 aaKnown RBP16.42■□□□□ 0.22
Trim54-201ENSMUST00000013771 Bcl2a1Q07440 172 aa16.42■□□□□ 0.22
Trim54-201ENSMUST00000013771 Arntl2Q2VPD4 579 aa16.42■□□□□ 0.22
Trim54-201ENSMUST00000013771 Gpsm3Q3U1Z5 159 aa16.42■□□□□ 0.22
Trim54-201ENSMUST00000013771 Fam160a2Q3U2I3 975 aa16.42■□□□□ 0.22
Trim54-201ENSMUST00000013771 Rrp36Q3UFY0 244 aaKnown RBP16.42■□□□□ 0.22
Trim54-201ENSMUST00000013771 Ripor1Q68FE6 1223 aa16.42■□□□□ 0.22
Trim54-201ENSMUST00000013771 Fam120bQ6RI63 786 aa16.42■□□□□ 0.22
Trim54-201ENSMUST00000013771 TwistnbQ78WZ7 330 aaKnown RBP16.42■□□□□ 0.22
Trim54-201ENSMUST00000013771 Orai2Q8BH10 250 aa16.42■□□□□ 0.22
Trim54-201ENSMUST00000013771 Ubap1Q8BH48 502 aa16.42■□□□□ 0.22
Trim54-201ENSMUST00000013771 Rccd1Q8BTU7 377 aa16.42■□□□□ 0.22
Trim54-201ENSMUST00000013771 Ip6k3Q8BWD2 396 aa16.42■□□□□ 0.22
Trim54-201ENSMUST00000013771 Dtx2Q8R3P2 619 aa16.42■□□□□ 0.22
Trim54-201ENSMUST00000013771 Olfr353Q8VGK0 311 aa16.42■□□□□ 0.22
Trim54-201ENSMUST00000013771 Brinp1Q920P3 760 aa16.42■□□□□ 0.22
Trim54-201ENSMUST00000013771 SmtnQ921U8 923 aa16.42■□□□□ 0.22
Trim54-201ENSMUST00000013771 CoprsQ9CQ13 173 aa16.42■□□□□ 0.22
Trim54-201ENSMUST00000013771 Trap1Q9CQN1 706 aaKnown RBP16.42■□□□□ 0.22
Trim54-201ENSMUST00000013771 Acot13Q9CQR4 140 aa16.42■□□□□ 0.22
Trim54-201ENSMUST00000013771 Klhdc8bQ9D2D9 354 aa16.42■□□□□ 0.22
Trim54-201ENSMUST00000013771 PllpQ9DCU2 182 aa16.42■□□□□ 0.22
Trim54-201ENSMUST00000013771 Orc3Q9JK30 715 aaKnown RBP16.42■□□□□ 0.22
Trim54-201ENSMUST00000013771 AadatQ9WVM8 425 aa16.42■□□□□ 0.22
Trim54-201ENSMUST00000013771 Gm8251F6VUT6 1994 aa16.42■□□□□ 0.22
Trim54-201ENSMUST00000013771 Vmn2r-ps130A0A140T8U3 855 aa16.41■□□□□ 0.22
Trim54-201ENSMUST00000013771 Pkd2l1A2A259 760 aa16.41■□□□□ 0.22
Trim54-201ENSMUST00000013771 Vmn2r59E9PUT5 865 aa16.41■□□□□ 0.22
Trim54-201ENSMUST00000013771 DesP31001 469 aaKnown RBP16.41■□□□□ 0.22
Trim54-201ENSMUST00000013771 ClgnP52194 611 aa16.41■□□□□ 0.22
Trim54-201ENSMUST00000013771 Rpl22P67984 128 aaKnown RBP16.41■□□□□ 0.22
Trim54-201ENSMUST00000013771 UrodP70697 367 aa16.41■□□□□ 0.22
Trim54-201ENSMUST00000013771 Irx1P81068 480 aa16.41■□□□□ 0.22
Trim54-201ENSMUST00000013771 Dusp2Q05922 318 aa16.41■□□□□ 0.22
Trim54-201ENSMUST00000013771 Nt5dc3Q3UHB1 546 aa16.41■□□□□ 0.22
Trim54-201ENSMUST00000013771 Zbtb2Q3V3W4 514 aaKnown RBP16.41■□□□□ 0.22
Trim54-201ENSMUST00000013771 Eif1aQ60872 144 aaKnown RBP16.41■□□□□ 0.22
Trim54-201ENSMUST00000013771 Rad54bQ6PFE3 886 aa16.41■□□□□ 0.22
Trim54-201ENSMUST00000013771 HjurpQ6PG16 667 aa16.41■□□□□ 0.22
Trim54-201ENSMUST00000013771 Ppp2r1bQ7TNP2 601 aaKnown RBP16.41■□□□□ 0.22
Trim54-201ENSMUST00000013771 Ttc29Q80VM3 471 aa16.41■□□□□ 0.22
Trim54-201ENSMUST00000013771 Rxfp3Q8BGE9 472 aa16.41■□□□□ 0.22
Trim54-201ENSMUST00000013771 Kcns3Q8BQZ8 491 aa16.41■□□□□ 0.22
Trim54-201ENSMUST00000013771 Nipal4Q8BZF2 406 aa16.41■□□□□ 0.22
Trim54-201ENSMUST00000013771 Grsf1Q8C5Q4 479 aaKnown RBP16.41■□□□□ 0.22
Trim54-201ENSMUST00000013771 Exd1Q8CDF7 570 aa16.41■□□□□ 0.22
Trim54-201ENSMUST00000013771 Olfr1325Q8VF43 315 aa16.41■□□□□ 0.22
Trim54-201ENSMUST00000013771 Olfr806Q8VFI2 313 aa16.41■□□□□ 0.22
Trim54-201ENSMUST00000013771 Wdr73Q9CWR1 371 aa16.41■□□□□ 0.22
Trim54-201ENSMUST00000013771 Zswim1Q9CWV7 455 aaKnown RBP16.41■□□□□ 0.22
Trim54-201ENSMUST00000013771 Htr3bQ9JHJ5 437 aa16.41■□□□□ 0.22
Trim54-201ENSMUST00000013771 Gm5678A0A1B0GRG8 277 aa16.4■□□□□ 0.22
Trim54-201ENSMUST00000013771 Cyp4a32A2A8T1 509 aa16.4■□□□□ 0.22
Trim54-201ENSMUST00000013771 Znf296E9Q6W4 445 aaKnown RBP16.4■□□□□ 0.22
Trim54-201ENSMUST00000013771 PdynO35417 248 aa16.4■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 66.5 ms