RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Syt14Q7TN84 555 aa18.33■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Tbc1d10bQ8BHL3 798 aa18.33■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Znf473Q8BI67 892 aa18.33■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 SgtaQ8BJU0 315 aa18.33■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Map4k5Q8BPM2 847 aaKnown RBP18.33■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Arhgap19Q8BRH3 494 aa18.33■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 ManbaQ8K2I4 879 aa18.33■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Slc29a4Q8R139 528 aa18.33■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Chchd4Q8VEA4 139 aa18.33■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Olfr617Q8VGA1 318 aa18.33■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Pcdhb8Q91XZ2 779 aa18.33■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Ifitm3Q9CQW9 137 aa18.33■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Gemin6Q9CX53 166 aa18.33■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 PyurfQ9D1C3 112 aa18.33■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Thap11Q9JJD0 305 aa18.33■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Nrg4Q9WTX4 115 aa18.33■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Rps6kb2Q9Z1M4 485 aa18.33■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Zfp563B8JJZ9 448 aa18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Gm11239E9Q5Z9 360 aa18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Tsc22d2E9Q7M2 769 aa18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Gm11237F2Z3W5 360 aa18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Gm11238F2Z478 360 aa18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Fam181aJ3QNB7 292 aa18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Bard1O70445 765 aa18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Lsp1P19973 330 aa18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 TfamP40630 243 aa18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Foxk1P42128 719 aaKnown RBP18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Ccr7P47774 378 aa18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Dusp2Q05922 318 aa18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Ms4a15Q3UPL6 245 aa18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Gm428Q3UTE2 360 aa18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Gm11487Q5RIS0 354 aa18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Nfatc2Q60591 927 aa18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Kcnh1Q60603 989 aa18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Pwwp2aQ69Z61 730 aa18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Nlgn2Q69ZK9 836 aa18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Bhlhb9Q6PB60 539 aa18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Chst2Q80WV3 530 aa18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Spp2Q8K1I3 203 aa18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Ugt2b1Q8R084 529 aa18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Angptl7Q8R1Q3 337 aa18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Olfr575Q8VH16 318 aa18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Rpl17Q9CPR4 184 aaKnown RBP18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Nufip1Q9QXX8 484 aa18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Maged1Q9QYH6 775 aaKnown RBP18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Baz2bA2AUY4 2123 aa18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Igkv12-46A0A140T8P6 115 aa18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Faap100A2ACJ2 879 aa18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Olfr1006A2ALD2 312 aa18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Gabrr3B2RXA8 464 aa18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Gm20431E9PY39 371 aa18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Smad6O35182 495 aa18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Cbx4O55187 551 aa18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Itm2bO89051 266 aa18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Gadd45aP48316 165 aa18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Epb42P49222 691 aa18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Rbm15Q0VBL3 962 aaKnown RBP18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Tnks2Q3UES3 1166 aa18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Gm853Q3UNZ2 425 aa18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Syndig1lQ3USQ7 237 aa18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Klf4Q60793 483 aa18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Fgfr3Q61851 801 aa18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 CapslQ6P8Y1 208 aa18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Tmem270Q6UJB9 264 aa18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Slc16a12Q8BGC3 486 aa18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Fam126bQ8C729 530 aa18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Treml1Q8K558 317 aa18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Med17Q8VCD5 649 aaKnown RBP18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Olfr1263Q8VG63 306 aa18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Txndc9Q9CQ79 226 aa18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 TrirQ9D735 173 aa18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Ap3m1Q9JKC8 418 aa18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Tmeff2Q9QYM9 374 aa18.32■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Usp34Q6ZQ93 3582 aa18.31■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Rhbdl2A2AGA4 302 aa18.31■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Dgcr6O35347 198 aa18.31■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Itgb1P09055 798 aaKnown RBP18.31■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Psmd7P26516 321 aa18.31■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Apex1P28352 317 aaKnown RBP18.31■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Sec1P97353 368 aa18.31■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 GaltQ03249 379 aa18.31■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Olfr813Q7TRH5 310 aa18.31■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Asrgl1Q8C0M9 326 aa18.31■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Mospd1Q8VEL0 213 aa18.31■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Sp7Q8VI67 428 aa18.31■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Ndufs1Q91VD9 727 aaKnown RBP18.31■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Mlf2Q99KX1 247 aa18.31■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Col25a1Q99MQ5 666 aa18.31■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Clec2gQ9D676 269 aa18.31■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Cog8Q9JJA2 640 aa18.31■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Adam23Q9R1V7 829 aa18.31■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Otud3B1AZ99 396 aa18.31■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Zfp846G3X996 541 aa18.31■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Rhox2hK7N6P1 191 aa18.31■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 P06324 132 aa18.31■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Htr7P32304 448 aa18.31■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Ankrd42Q3V096 527 aa18.31■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 MlipQ5FW52 269 aa18.31■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Snx31Q6P8Y7 439 aa18.31■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Cfap206Q6PE87 622 aa18.31■□□□□ 0.52
Retrieved 100 of 22,080 RNA–protein pairs in 24.1 ms