RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Ogfrl1Q8VE52 464 aa9.01□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Olfr665Q8VG79 316 aa9.01□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 As3mtQ91WU5 376 aa9.01□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Lpin3Q99PI4 848 aa9.01□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Hacd2Q9D3B1 254 aa9.01□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Slc9a5B2RXE2 898 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Olfr596F8VQ26 312 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Vmn2r102L7N279 857 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Mmp10O55123 476 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Shox2P70390 331 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 SmsP97355 366 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Sec31bQ3TZ89 1158 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Slc25a51Q5HZI9 298 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Fbxw11Q5SRY7 542 aaKnown RBP9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Clcn4Q61418 747 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Mapk3Q63844 380 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Syt15Q8C6N3 418 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Slc3a1Q91WV7 685 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Zdhhc21Q9D270 265 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Tcf7l1Q9Z1J1 584 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Fndc1E9Q043 1732 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Gm4985A2ALC6 410 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Eif2b3B1AUN2 452 aaKnown RBP9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Vmn2r18E9Q280 788 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Gpd1P13707 349 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Tmem173Q3TBT3 378 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Slc10a5Q5PT54 434 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Chrnb3Q8BMN3 464 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Plin5Q8BVZ1 463 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Casp9Q8C3Q9 454 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 GatcQ8CBY0 155 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Aoc1Q8JZQ5 751 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Pxdc1Q8JZU6 231 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 ItpkaQ8R071 459 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Lrrc69Q9D9Q0 347 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 GraspQ9JJA9 392 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 PigqQ9QYT7 581 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Cdc42bpbQ7TT50 1713 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Slc4a11A2AJN7 862 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Gm14147A2AQX6 640 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Ildr2B5TVM2 661 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Coro1aO89053 461 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Cyp2a4P15392 494 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 LynP25911 512 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 CebpaP53566 359 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Art5P70352 309 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Txnl4aP83877 142 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 UradQ283N4 178 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Spin1Q61142 262 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Sat2Q6P8J2 170 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Olfr664Q7TRP5 306 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Kirrel1Q80W68 789 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 4930503B20RikQ80ZP0 234 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Taf5Q8C092 801 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Tmem72Q8C3K5 275 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Abcg4Q91WA9 646 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 SncaipQ99ME3 962 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Zdhhc6Q9CPV7 413 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Agpat3Q9D517 376 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 EqtnQ9D9V2 337 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Alg5Q9DB25 324 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Cldn9Q9Z0S7 217 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 H2-BlV9GXR0 257 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Akap12Q9WTQ5 1684 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Serpine1P22777 402 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 FpgsP48760 587 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 S100a1P56565 94 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Irf7P70434 457 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Htr4P97288 388 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Dcst1Q059Y8 732 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Zdhhc11Q14AK4 347 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 4930502E18RikQ14BQ3 236 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Mapk10Q61831 464 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Fam205cQ80YD3 371 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 OsgepQ8BWU5 335 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Olfr952Q8VFD7 314 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Olfr818Q8VG46 318 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 MynnQ99MD8 610 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Tbc1d15Q9CXF4 671 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Pcbd2Q9CZL5 136 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Zbed3Q9D0L1 228 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Prmt2Q9R144 448 aa9□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Dnmt1P13864 1620 aaKnown RBP8.99□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Nt5c1aA3KFX0 365 aa8.99□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Mybpc1D3YU50 1127 aa8.99□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Ddx6P54823 483 aaKnown RBP8.99□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Scarf2P59222 833 aa8.99□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Lypla1P97823 230 aa8.99□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Lrrc74bQ14BP6 391 aa8.99□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Arl14Q3SXC5 192 aa8.99□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Q3UK37 420 aa8.99□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Smu1Q3UKJ7 513 aaKnown RBP8.99□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Fam198bQ3UPI1 517 aa8.99□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Mthfd1lQ3V3R1 977 aaKnown RBP8.99□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Lix1Q6P566 282 aa8.99□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Tm7sf2Q71KT5 418 aa8.99□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Rhbdf2Q80WQ6 827 aa8.99□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Prap1Q80XD8 149 aa8.99□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Klhl42Q8BFQ9 493 aa8.99□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Zbtb26Q8C8S0 451 aa8.99□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 25 ms