RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 SSFA2P28290 1259 aa10.37□□□□□ -0.75
PHGDH-225ENST00000641720 CACNA1SQ13698 1873 aa10.37□□□□□ -0.75
PHGDH-225ENST00000641720 RRS1Q15050 365 aaKnown RBP10.37□□□□□ -0.75
PHGDH-225ENST00000641720 HDGFL2Q7Z4V5 671 aaPredicted RBP10.37□□□□□ -0.75
PHGDH-225ENST00000641720 PIGBQ92521 554 aa10.37□□□□□ -0.75
PHGDH-225ENST00000641720 KIF24Q5T7B8 1368 aa10.37□□□□□ -0.75
PHGDH-225ENST00000641720 COL11A2P13942 1736 aaPredicted RBP10.36□□□□□ -0.75
PHGDH-225ENST00000641720 KDM6AO15550 1401 aaPredicted RBP10.36□□□□□ -0.75
PHGDH-225ENST00000641720 MSH5O43196 834 aa10.36□□□□□ -0.75
PHGDH-225ENST00000641720 KCNA3P22001 575 aa10.36□□□□□ -0.75
PHGDH-225ENST00000641720 HTRA3P83110 453 aa10.36□□□□□ -0.75
PHGDH-225ENST00000641720 SLC4A9Q96Q91 983 aa10.36□□□□□ -0.75
PHGDH-225ENST00000641720 TERF2IPQ9NYB0 399 aa10.36□□□□□ -0.75
PHGDH-225ENST00000641720 ARFGEF2Q9Y6D5 1785 aa10.36□□□□□ -0.75
PHGDH-225ENST00000641720 ST20-MTHFSA0A0A6YYL1 179 aa10.35□□□□□ -0.75
PHGDH-225ENST00000641720 FYB1O15117 783 aa10.35□□□□□ -0.75
PHGDH-225ENST00000641720 HSP90AB2PQ58FF8 381 aa10.35□□□□□ -0.75
PHGDH-225ENST00000641720 TMC1Q8TDI8 760 aa10.35□□□□□ -0.75
PHGDH-225ENST00000641720 KLRG1Q96E93 195 aa10.35□□□□□ -0.75
PHGDH-225ENST00000641720 FLT4P35916 1363 aa10.35□□□□□ -0.75
PHGDH-225ENST00000641720 UBR2Q8IWV8 1755 aa10.34□□□□□ -0.75
PHGDH-225ENST00000641720 LOC102724428A0A0B4J2F2 783 aa10.34□□□□□ -0.75
PHGDH-225ENST00000641720 SIK1P57059 783 aa10.34□□□□□ -0.75
PHGDH-225ENST00000641720 MPRIPQ6WCQ1 1025 aa10.34□□□□□ -0.75
PHGDH-225ENST00000641720 RBM46Q8TBY0 533 aaKnown RBP10.34□□□□□ -0.75
PHGDH-225ENST00000641720 PHF14O94880 888 aa10.33□□□□□ -0.76
PHGDH-225ENST00000641720 HSPA5P11021 654 aaKnown RBP10.33□□□□□ -0.76
PHGDH-225ENST00000641720 AMPHP49418 695 aa10.33□□□□□ -0.76
PHGDH-225ENST00000641720 COG3Q96JB2 828 aa10.33□□□□□ -0.76
PHGDH-225ENST00000641720 AK7Q96M32 723 aa10.33□□□□□ -0.76
PHGDH-225ENST00000641720 SMG6Q86US8 1419 aaKnown RBP10.33□□□□□ -0.76
PHGDH-225ENST00000641720 PLEKHG2Q9H7P9 1386 aa10.32□□□□□ -0.76
PHGDH-225ENST00000641720 MMP10P09238 476 aa10.32□□□□□ -0.76
PHGDH-225ENST00000641720 TATP17735 454 aaPredicted RBP10.32□□□□□ -0.76
PHGDH-225ENST00000641720 SMARCC1Q92922 1105 aaPredicted RBP10.32□□□□□ -0.76
PHGDH-225ENST00000641720 ASAP1Q9ULH1 1129 aa10.32□□□□□ -0.76
PHGDH-225ENST00000641720 A0A0G2JLW4 131 aa10.31□□□□□ -0.76
PHGDH-225ENST00000641720 PRELPP51888 382 aa10.31□□□□□ -0.76
PHGDH-225ENST00000641720 TGFB2P61812 414 aa10.31□□□□□ -0.76
PHGDH-225ENST00000641720 EIF4G2P78344 907 aaKnown RBP eCLIP10.31□□□□□ -0.76
PHGDH-225ENST00000641720 RAPGEF4Q8WZA2 1011 aa10.31□□□□□ -0.76
PHGDH-225ENST00000641720 GGNBP2Q9H3C7 697 aa10.31□□□□□ -0.76
PHGDH-225ENST00000641720 GYS1P13807 737 aa10.3□□□□□ -0.76
PHGDH-225ENST00000641720 DPEP1P16444 411 aa10.3□□□□□ -0.76
PHGDH-225ENST00000641720 DCAF5Q96JK2 942 aa10.3□□□□□ -0.76
PHGDH-225ENST00000641720 ATG3Q9NT62 314 aa10.3□□□□□ -0.76
PHGDH-225ENST00000641720 TNRC18O15417 2968 aaPredicted RBP10.29□□□□□ -0.76
PHGDH-225ENST00000641720 SIPA1L3O60292 1781 aaPredicted RBP10.29□□□□□ -0.76
PHGDH-225ENST00000641720 ADAMTSL1Q8N6G6 1762 aa10.29□□□□□ -0.76
PHGDH-225ENST00000641720 SCN7AQ01118 1682 aa10.29□□□□□ -0.76
PHGDH-225ENST00000641720 GNPATO15228 680 aa10.29□□□□□ -0.76
PHGDH-225ENST00000641720 ZEB1P37275 1124 aaPredicted RBP10.29□□□□□ -0.76
PHGDH-225ENST00000641720 FSTL1Q12841 308 aa10.29□□□□□ -0.76
PHGDH-225ENST00000641720 EMILIN1Q9Y6C2 1016 aa10.29□□□□□ -0.76
PHGDH-225ENST00000641720 BCS1LQ9Y276 419 aa10.28□□□□□ -0.76
PHGDH-225ENST00000641720 CNTNAP4Q9C0A0 1308 aa10.28□□□□□ -0.76
PHGDH-225ENST00000641720 BCORQ6W2J9 1755 aa10.27□□□□□ -0.77
PHGDH-225ENST00000641720 PHKG2P15735 406 aa10.27□□□□□ -0.77
PHGDH-225ENST00000641720 HMGB2P26583 209 aaKnown RBP10.27□□□□□ -0.77
PHGDH-225ENST00000641720 DDR1Q08345 913 aa10.27□□□□□ -0.77
PHGDH-225ENST00000641720 C9orf131Q5VYM1 1079 aa10.27□□□□□ -0.77
PHGDH-225ENST00000641720 CARD14Q9BXL6 1004 aa10.27□□□□□ -0.77
PHGDH-225ENST00000641720 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.27□□□□□ -0.77
PHGDH-225ENST00000641720 SCN4AP35499 1836 aa10.27□□□□□ -0.77
PHGDH-225ENST00000641720 SLX4Q8IY92 1834 aa10.26□□□□□ -0.77
PHGDH-225ENST00000641720 THSD7BQ9C0I4 1608 aa10.26□□□□□ -0.77
PHGDH-225ENST00000641720 RC3H1Q5TC82 1133 aaKnown RBP10.26□□□□□ -0.77
PHGDH-225ENST00000641720 ARHGEF1Q92888 912 aaKnown RBP10.26□□□□□ -0.77
PHGDH-225ENST00000641720 EYA1Q99502 592 aa10.26□□□□□ -0.77
PHGDH-225ENST00000641720 WASHC2AQ641Q2 1341 aa10.26□□□□□ -0.77
PHGDH-225ENST00000641720 MRC1P22897 1456 aa10.25□□□□□ -0.77
PHGDH-225ENST00000641720 POTECB2RU33 542 aa10.25□□□□□ -0.77
PHGDH-225ENST00000641720 ATP6V1AP38606 617 aa10.25□□□□□ -0.77
PHGDH-225ENST00000641720 TMF1P82094 1093 aa10.25□□□□□ -0.77
PHGDH-225ENST00000641720 ARHGAP27Q6ZUM4 889 aa10.25□□□□□ -0.77
PHGDH-225ENST00000641720 RPS6KA4O75676 772 aa10.24□□□□□ -0.77
PHGDH-225ENST00000641720 FCHSD2O94868 740 aa10.24□□□□□ -0.77
PHGDH-225ENST00000641720 ADRA2BP18089 450 aa10.24□□□□□ -0.77
PHGDH-225ENST00000641720 TNS4Q8IZW8 715 aa10.24□□□□□ -0.77
PHGDH-225ENST00000641720 NLGN1Q8N2Q7 840 aa10.24□□□□□ -0.77
PHGDH-225ENST00000641720 TMOD3Q9NYL9 352 aa10.24□□□□□ -0.77
PHGDH-225ENST00000641720 USP42Q9H9J4 1324 aaKnown RBP10.24□□□□□ -0.77
PHGDH-225ENST00000641720 HSPA1AP0DMV8 641 aaKnown RBP10.23□□□□□ -0.77
PHGDH-225ENST00000641720 HSPA1BP0DMV9 641 aaKnown RBP10.23□□□□□ -0.77
PHGDH-225ENST00000641720 RRAGCQ9HB90 399 aa10.23□□□□□ -0.77
PHGDH-225ENST00000641720 CCDC87Q9NVE4 849 aa10.23□□□□□ -0.77
PHGDH-225ENST00000641720 KIF7Q2M1P5 1343 aa10.23□□□□□ -0.77
PHGDH-225ENST00000641720 ZC3H4Q9UPT8 1303 aaKnown RBP10.23□□□□□ -0.77
PHGDH-225ENST00000641720 CAPN15O75808 1086 aa10.22□□□□□ -0.77
PHGDH-225ENST00000641720 TM4SF1P30408 202 aa10.22□□□□□ -0.77
PHGDH-225ENST00000641720 CHRNA5P30532 468 aa10.22□□□□□ -0.77
PHGDH-225ENST00000641720 FKBP8Q14318 412 aa10.22□□□□□ -0.77
PHGDH-225ENST00000641720 RNF181Q9P0P0 153 aa10.22□□□□□ -0.77
PHGDH-225ENST00000641720 SRP68Q9UHB9 627 aaKnown RBP10.22□□□□□ -0.77
PHGDH-225ENST00000641720 RTCBQ9Y3I0 505 aaKnown RBP10.22□□□□□ -0.77
PHGDH-225ENST00000641720 CARMIL3Q8ND23 1372 aa10.22□□□□□ -0.77
PHGDH-225ENST00000641720 TRPM7Q96QT4 1865 aa10.21□□□□□ -0.77
PHGDH-225ENST00000641720 POLRMTO00411 1230 aaKnown RBP10.21□□□□□ -0.77
PHGDH-225ENST00000641720 SLC34A2O95436 690 aa10.21□□□□□ -0.77
PHGDH-225ENST00000641720 RASSF7Q02833 373 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms