RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 GRPEL1Q9HAV7 217 aa20.73■□□□□ 0.91
PHGDH-223ENST00000641597 HMMRO75330 724 aa20.71■□□□□ 0.91
PHGDH-223ENST00000641597 ANXA1P04083 346 aa20.71■□□□□ 0.91
PHGDH-223ENST00000641597 FOXD4L5Q5VV16 416 aaPredicted RBP20.71■□□□□ 0.91
PHGDH-223ENST00000641597 UNC5CLQ8IV45 518 aa20.71■□□□□ 0.91
PHGDH-223ENST00000641597 FOXD4L4Q8WXT5 416 aaPredicted RBP20.71■□□□□ 0.91
PHGDH-223ENST00000641597 IL1RAPL2Q9NP60 686 aa20.71■□□□□ 0.91
PHGDH-223ENST00000641597 EIF2S2P20042 333 aaKnown RBP20.71■□□□□ 0.91
PHGDH-223ENST00000641597 NOL8Q76FK4 1167 aaKnown RBP20.71■□□□□ 0.91
PHGDH-223ENST00000641597 NWD1Q149M9 1564 aa20.7■□□□□ 0.9
PHGDH-223ENST00000641597 BAG4O95429 457 aaKnown RBP20.7■□□□□ 0.9
PHGDH-223ENST00000641597 KCNQ3O43525 872 aa20.7■□□□□ 0.9
PHGDH-223ENST00000641597 LGR6Q9HBX8 967 aa20.7■□□□□ 0.9
PHGDH-223ENST00000641597 CCDC30Q5VVM6 783 aa20.69■□□□□ 0.9
PHGDH-223ENST00000641597 PALD1Q9ULE6 856 aa20.69■□□□□ 0.9
PHGDH-223ENST00000641597 RILPL2Q969X0 211 aa20.69■□□□□ 0.9
PHGDH-223ENST00000641597 USP44Q9H0E7 712 aa20.69■□□□□ 0.9
PHGDH-223ENST00000641597 IL25Q9H293 177 aa20.69■□□□□ 0.9
PHGDH-223ENST00000641597 MAP4K4O95819 1239 aaPredicted RBP20.68■□□□□ 0.9
PHGDH-223ENST00000641597 MCTP1Q6DN14 999 aa20.68■□□□□ 0.9
PHGDH-223ENST00000641597 ARHGAP23Q9P227 1491 aa20.68■□□□□ 0.9
PHGDH-223ENST00000641597 ERC2O15083 957 aa20.68■□□□□ 0.9
PHGDH-223ENST00000641597 XPCQ01831 940 aaPredicted RBP20.68■□□□□ 0.9
PHGDH-223ENST00000641597 THEMISQ8N1K5 641 aaPredicted RBP20.68■□□□□ 0.9
PHGDH-223ENST00000641597 MARF1Q9Y4F3 1742 aaKnown RBP20.67■□□□□ 0.9
PHGDH-223ENST00000641597 SLIT1O75093 1534 aa20.67■□□□□ 0.9
PHGDH-223ENST00000641597 NBPF6Q5VWK0 638 aa20.67■□□□□ 0.9
PHGDH-223ENST00000641597 CASC1Q6TDU7 716 aa20.67■□□□□ 0.9
PHGDH-223ENST00000641597 NBPF4Q96M43 638 aa20.67■□□□□ 0.9
PHGDH-223ENST00000641597 LRRCC1Q9C099 1032 aa20.67■□□□□ 0.9
PHGDH-223ENST00000641597 MAP3K5Q99683 1374 aa20.67■□□□□ 0.9
PHGDH-223ENST00000641597 TRIM6-TRIM34B2RNG4 842 aa20.67■□□□□ 0.9
PHGDH-223ENST00000641597 MRE11P49959 708 aa20.67■□□□□ 0.9
PHGDH-223ENST00000641597 LRRC59Q96AG4 307 aaKnown RBP20.67■□□□□ 0.9
PHGDH-223ENST00000641597 SALL3Q9BXA9 1300 aa20.66■□□□□ 0.9
PHGDH-223ENST00000641597 MX1P20591 662 aa20.66■□□□□ 0.9
PHGDH-223ENST00000641597 TAF7Q15545 349 aaPredicted RBP20.66■□□□□ 0.9
PHGDH-223ENST00000641597 HDGFL1Q5TGJ6 251 aa20.66■□□□□ 0.9
PHGDH-223ENST00000641597 NUTM1Q86Y26 1132 aa20.66■□□□□ 0.9
PHGDH-223ENST00000641597 ZDHHC9Q9Y397 364 aa20.65■□□□□ 0.9
PHGDH-223ENST00000641597 ATP8B2P98198 1209 aa20.65■□□□□ 0.9
PHGDH-223ENST00000641597 DDX49Q9Y6V7 483 aaKnown RBP20.65■□□□□ 0.9
PHGDH-223ENST00000641597 FAM208AQ9UK61 1670 aaKnown RBP20.65■□□□□ 0.9
PHGDH-223ENST00000641597 REC8O95072 547 aa20.64■□□□□ 0.9
PHGDH-223ENST00000641597 NEK4P51957 841 aa20.64■□□□□ 0.9
PHGDH-223ENST00000641597 OSBPL3Q9H4L5 887 aa20.64■□□□□ 0.9
PHGDH-223ENST00000641597 XRN1Q8IZH2 1706 aaKnown RBP20.64■□□□□ 0.89
PHGDH-223ENST00000641597 NBPF7P0C2Y1 421 aaPredicted RBP20.63■□□□□ 0.89
PHGDH-223ENST00000641597 NCLP19338 710 aaKnown RBP20.63■□□□□ 0.89
PHGDH-223ENST00000641597 TRHP20396 242 aaPredicted RBP20.63■□□□□ 0.89
PHGDH-223ENST00000641597 EIF5BO60841 1220 aaKnown RBP20.63■□□□□ 0.89
PHGDH-223ENST00000641597 ANO2Q9NQ90 1003 aa20.63■□□□□ 0.89
PHGDH-223ENST00000641597 ESYT1Q9BSJ8 1104 aa20.62■□□□□ 0.89
PHGDH-223ENST00000641597 IBTKQ9P2D0 1353 aaPredicted RBP20.62■□□□□ 0.89
PHGDH-223ENST00000641597 ST18O60284 1047 aa20.62■□□□□ 0.89
PHGDH-223ENST00000641597 CYP2E1P05181 493 aaPredicted RBP20.62■□□□□ 0.89
PHGDH-223ENST00000641597 GNAI3P08754 354 aa20.62■□□□□ 0.89
PHGDH-223ENST00000641597 CHPF2Q9P2E5 772 aa20.62■□□□□ 0.89
PHGDH-223ENST00000641597 PHF8Q9UPP1 1060 aa20.62■□□□□ 0.89
PHGDH-223ENST00000641597 LRRC37A3O60309 1634 aa20.62■□□□□ 0.89
PHGDH-223ENST00000641597 ERBB4Q15303 1308 aa20.62■□□□□ 0.89
PHGDH-223ENST00000641597 UBTFL1P0CB47 393 aaPredicted RBP20.61■□□□□ 0.89
PHGDH-223ENST00000641597 UPF3BQ9BZI7 483 aaKnown RBP20.61■□□□□ 0.89
PHGDH-223ENST00000641597 MPRIPQ6WCQ1 1025 aa20.61■□□□□ 0.89
PHGDH-223ENST00000641597 PPP1R42Q7Z4L9 355 aa20.61■□□□□ 0.89
PHGDH-223ENST00000641597 HTATSF1O43719 755 aaKnown RBP20.6■□□□□ 0.89
PHGDH-223ENST00000641597 DTNBO60941 627 aa20.6■□□□□ 0.89
PHGDH-223ENST00000641597 CHMLP26374 656 aa20.6■□□□□ 0.89
PHGDH-223ENST00000641597 ESCO1Q5FWF5 840 aa20.6■□□□□ 0.89
PHGDH-223ENST00000641597 CAVIN1Q6NZI2 390 aaKnown RBP20.59■□□□□ 0.89
PHGDH-223ENST00000641597 RBM27Q9P2N5 1060 aaKnown RBP20.59■□□□□ 0.89
PHGDH-223ENST00000641597 FER1L4A9Z1Z3 1794 aa20.59■□□□□ 0.89
PHGDH-223ENST00000641597 SURF6O75683 361 aaKnown RBP20.59■□□□□ 0.89
PHGDH-223ENST00000641597 FOXD4L6Q3SYB3 417 aaPredicted RBP20.59■□□□□ 0.89
PHGDH-223ENST00000641597 FOXD4L3Q6VB84 417 aaPredicted RBP20.59■□□□□ 0.89
PHGDH-223ENST00000641597 TMX3Q96JJ7 454 aa20.59■□□□□ 0.89
PHGDH-223ENST00000641597 PRAMEF22A3QJZ6 481 aa20.58■□□□□ 0.89
PHGDH-223ENST00000641597 PRPF40AO75400 957 aaKnown RBP20.58■□□□□ 0.89
PHGDH-223ENST00000641597 LMBRD1Q9NUN5 540 aa20.58■□□□□ 0.89
PHGDH-223ENST00000641597 PI4KAP2A4QPH2 592 aa20.58■□□□□ 0.88
PHGDH-223ENST00000641597 PI4KAP1Q8N8J0 262 aa20.58■□□□□ 0.88
PHGDH-223ENST00000641597 NSFL1CQ9UNZ2 370 aaKnown RBP20.58■□□□□ 0.88
PHGDH-223ENST00000641597 SOS1Q07889 1333 aaPredicted RBP20.57■□□□□ 0.88
PHGDH-223ENST00000641597 SKOR2Q2VWA4 1001 aaPredicted RBP20.57■□□□□ 0.88
PHGDH-223ENST00000641597 GOLGA6L22H0YM25 854 aa20.57■□□□□ 0.88
PHGDH-223ENST00000641597 EIF4A1P60842 406 aaKnown RBP20.57■□□□□ 0.88
PHGDH-223ENST00000641597 LMOD2Q6P5Q4 547 aa20.57■□□□□ 0.88
PHGDH-223ENST00000641597 CLEC17AQ6ZS10 378 aa20.57■□□□□ 0.88
PHGDH-223ENST00000641597 LARP6Q9BRS8 491 aaKnown RBP20.57■□□□□ 0.88
PHGDH-223ENST00000641597 RGPD2P0DJD1 1756 aa20.57■□□□□ 0.88
PHGDH-223ENST00000641597 LTN1O94822 1766 aa20.56■□□□□ 0.88
PHGDH-223ENST00000641597 SRGAP3O43295 1099 aa20.56■□□□□ 0.88
PHGDH-223ENST00000641597 KLHL40Q2TBA0 621 aa20.56■□□□□ 0.88
PHGDH-223ENST00000641597 TUBGCP6Q96RT7 1819 aa20.55■□□□□ 0.88
PHGDH-223ENST00000641597 NUCB2P80303 420 aa20.55■□□□□ 0.88
PHGDH-223ENST00000641597 PSME1Q06323 249 aa20.55■□□□□ 0.88
PHGDH-223ENST00000641597 PROSER3Q2NL68 480 aa20.55■□□□□ 0.88
PHGDH-223ENST00000641597 GPT2Q8TD30 523 aa20.55■□□□□ 0.88
PHGDH-223ENST00000641597 IP6K1Q92551 441 aa20.55■□□□□ 0.88
PHGDH-223ENST00000641597 SRCIN1Q9C0H9 1055 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms