RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 TAF7Q15545 349 aaPredicted RBP16.81■□□□□ 0.28
PHGDH-218ENST00000641491 FAM182BQ5T319 152 aa16.81■□□□□ 0.28
PHGDH-218ENST00000641491 ACSBG1Q96GR2 724 aa16.81■□□□□ 0.28
PHGDH-218ENST00000641491 THUMPD2Q9BTF0 503 aaKnown RBP16.81■□□□□ 0.28
PHGDH-218ENST00000641491 SLC52A2Q9HAB3 445 aa16.81■□□□□ 0.28
PHGDH-218ENST00000641491 IFT57Q9NWB7 429 aa16.81■□□□□ 0.28
PHGDH-218ENST00000641491 CAMKK2Q96RR4 588 aa16.8■□□□□ 0.28
PHGDH-218ENST00000641491 LGR6Q9HBX8 967 aa16.8■□□□□ 0.28
PHGDH-218ENST00000641491 IL17REQ8NFR9 667 aa16.79■□□□□ 0.28
PHGDH-218ENST00000641491 CENPBP07199 599 aaPredicted RBP16.78■□□□□ 0.28
PHGDH-218ENST00000641491 NFATC2IPQ8NCF5 419 aa16.78■□□□□ 0.28
PHGDH-218ENST00000641491 CFAP44Q96MT7 982 aa16.78■□□□□ 0.28
PHGDH-218ENST00000641491 BABAM1Q9NWV8 329 aa16.78■□□□□ 0.28
PHGDH-218ENST00000641491 KDM6AO15550 1401 aaPredicted RBP16.78■□□□□ 0.28
PHGDH-218ENST00000641491 CEMIPQ8WUJ3 1361 aa16.77■□□□□ 0.28
PHGDH-218ENST00000641491 PRIM1P49642 420 aaKnown RBP16.77■□□□□ 0.28
PHGDH-218ENST00000641491 SMARCC1Q92922 1105 aaPredicted RBP16.76■□□□□ 0.27
PHGDH-218ENST00000641491 CHMP4AQ9BY43 222 aa16.76■□□□□ 0.27
PHGDH-218ENST00000641491 BCL9O00512 1426 aa16.73■□□□□ 0.27
PHGDH-218ENST00000641491 DCAF8L1A6NGE4 600 aa16.73■□□□□ 0.27
PHGDH-218ENST00000641491 TRIM37O94972 964 aa16.73■□□□□ 0.27
PHGDH-218ENST00000641491 APBA3O96018 575 aa16.73■□□□□ 0.27
PHGDH-218ENST00000641491 HMGB2P26583 209 aaKnown RBP16.73■□□□□ 0.27
PHGDH-218ENST00000641491 FMNL2Q96PY5 1086 aa16.73■□□□□ 0.27
PHGDH-218ENST00000641491 ZNF521Q96K83 1311 aa16.72■□□□□ 0.27
PHGDH-218ENST00000641491 FANCIQ9NVI1 1328 aa16.72■□□□□ 0.27
PHGDH-218ENST00000641491 PIGBQ92521 554 aa16.72■□□□□ 0.27
PHGDH-218ENST00000641491 TSR2Q969E8 191 aaKnown RBP16.72■□□□□ 0.27
PHGDH-218ENST00000641491 RBM42Q9BTD8 480 aaKnown RBP16.72■□□□□ 0.27
PHGDH-218ENST00000641491 BCL11BQ9C0K0 894 aaPredicted RBP16.72■□□□□ 0.27
PHGDH-218ENST00000641491 MBIPQ9NS73 344 aa16.72■□□□□ 0.27
PHGDH-218ENST00000641491 MIS18AQ9NYP9 233 aa16.72■□□□□ 0.27
PHGDH-218ENST00000641491 SHANK3Q9BYB0 1731 aa16.72■□□□□ 0.27
PHGDH-218ENST00000641491 MRC1P22897 1456 aa16.72■□□□□ 0.27
PHGDH-218ENST00000641491 DLG5Q8TDM6 1919 aa16.72■□□□□ 0.27
PHGDH-218ENST00000641491 TNS1Q9HBL0 1735 aaKnown RBP16.71■□□□□ 0.27
PHGDH-218ENST00000641491 SLFN5Q08AF3 891 aa16.71■□□□□ 0.27
PHGDH-218ENST00000641491 NBPF14Q5TI25 921 aa16.71■□□□□ 0.27
PHGDH-218ENST00000641491 ZNF790Q6PG37 636 aa16.71■□□□□ 0.27
PHGDH-218ENST00000641491 DOT1LQ8TEK3 1739 aa16.7■□□□□ 0.26
PHGDH-218ENST00000641491 CHL1O00533 1208 aa16.7■□□□□ 0.26
PHGDH-218ENST00000641491 NPM2Q86SE8 214 aaKnown RBP16.7■□□□□ 0.26
PHGDH-218ENST00000641491 PTCD1O75127 700 aaKnown RBP16.69■□□□□ 0.26
PHGDH-218ENST00000641491 SLC39A6Q13433 755 aa16.69■□□□□ 0.26
PHGDH-218ENST00000641491 CDCA7LQ96GN5 454 aa16.69■□□□□ 0.26
PHGDH-218ENST00000641491 SPON1Q9HCB6 807 aa16.69■□□□□ 0.26
PHGDH-218ENST00000641491 PPP1R1BQ9UD71 204 aaPredicted RBP16.69■□□□□ 0.26
PHGDH-218ENST00000641491 SCN11AQ9UI33 1791 aa16.69■□□□□ 0.26
PHGDH-218ENST00000641491 PALLDQ8WX93 1383 aa16.68■□□□□ 0.26
PHGDH-218ENST00000641491 KCNQ2O43526 872 aa16.68■□□□□ 0.26
PHGDH-218ENST00000641491 CT47B1P0C2W7 299 aaPredicted RBP16.67■□□□□ 0.26
PHGDH-218ENST00000641491 ZNF853P0CG23 659 aa16.67■□□□□ 0.26
PHGDH-218ENST00000641491 TEX13AQ9BXU3 409 aaPredicted RBP16.67■□□□□ 0.26
PHGDH-218ENST00000641491 SOS1Q07889 1333 aaPredicted RBP16.67■□□□□ 0.26
PHGDH-218ENST00000641491 SNRPA1P09661 255 aaKnown RBP16.66■□□□□ 0.26
PHGDH-218ENST00000641491 EXOSC9Q06265 439 aaKnown RBP16.66■□□□□ 0.26
PHGDH-218ENST00000641491 TWISTNBQ3B726 338 aaPredicted RBP16.66■□□□□ 0.26
PHGDH-218ENST00000641491 STK31Q9BXU1 1019 aa16.66■□□□□ 0.26
PHGDH-218ENST00000641491 ASAP1Q9ULH1 1129 aa16.66■□□□□ 0.26
PHGDH-218ENST00000641491 NHSQ6T4R5 1651 aa16.65■□□□□ 0.26
PHGDH-218ENST00000641491 ADAMTS7Q9UKP4 1686 aa16.65■□□□□ 0.26
PHGDH-218ENST00000641491 STARD3NLO95772 234 aa16.65■□□□□ 0.26
PHGDH-218ENST00000641491 DUSP27Q5VZP5 1158 aa16.65■□□□□ 0.26
PHGDH-218ENST00000641491 ATG3Q9NT62 314 aa16.65■□□□□ 0.26
PHGDH-218ENST00000641491 KAT6BQ8WYB5 2073 aa16.65■□□□□ 0.26
PHGDH-218ENST00000641491 ELL2O00472 640 aaPredicted RBP16.64■□□□□ 0.25
PHGDH-218ENST00000641491 HOXB7P09629 217 aa16.64■□□□□ 0.25
PHGDH-218ENST00000641491 CANXP27824 592 aaKnown RBP16.64■□□□□ 0.25
PHGDH-218ENST00000641491 ATP6V1AP38606 617 aa16.64■□□□□ 0.25
PHGDH-218ENST00000641491 EIF4A1P60842 406 aaKnown RBP16.64■□□□□ 0.25
PHGDH-218ENST00000641491 HDGFL1Q5TGJ6 251 aa16.64■□□□□ 0.25
PHGDH-218ENST00000641491 SPINK5Q9NQ38 1064 aaPredicted RBP16.64■□□□□ 0.25
PHGDH-218ENST00000641491 TOGARAM1Q9Y4F4 1720 aa16.64■□□□□ 0.25
PHGDH-218ENST00000641491 EIF2S2P20042 333 aaKnown RBP16.63■□□□□ 0.25
PHGDH-218ENST00000641491 CCDC30Q5VVM6 783 aa16.63■□□□□ 0.25
PHGDH-218ENST00000641491 VSIG10Q8N0Z9 540 aa16.63■□□□□ 0.25
PHGDH-218ENST00000641491 ZNF428Q96B54 188 aa16.63■□□□□ 0.25
PHGDH-218ENST00000641491 ZNF496Q96IT1 587 aaPredicted RBP16.63■□□□□ 0.25
PHGDH-218ENST00000641491 CCNL1Q9UK58 526 aaPredicted RBP16.63■□□□□ 0.25
PHGDH-218ENST00000641491 HEG1Q9ULI3 1381 aa16.63■□□□□ 0.25
PHGDH-218ENST00000641491 LOC102724428A0A0B4J2F2 783 aa16.62■□□□□ 0.25
PHGDH-218ENST00000641491 SIK1P57059 783 aa16.62■□□□□ 0.25
PHGDH-218ENST00000641491 KCNQ3O43525 872 aa16.61■□□□□ 0.25
PHGDH-218ENST00000641491 SLC27A3Q5K4L6 730 aa16.61■□□□□ 0.25
PHGDH-218ENST00000641491 RREB1Q92766 1687 aa16.61■□□□□ 0.25
PHGDH-218ENST00000641491 GIGYF1O75420 1035 aaPredicted RBP16.59■□□□□ 0.25
PHGDH-218ENST00000641491 TRMT2AQ8IZ69 625 aaKnown RBP16.59■□□□□ 0.25
PHGDH-218ENST00000641491 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.59■□□□□ 0.25
PHGDH-218ENST00000641491 C8orf58Q8NAV2 365 aa16.59■□□□□ 0.25
PHGDH-218ENST00000641491 ZNF784Q8NCA9 323 aaPredicted RBP16.59■□□□□ 0.25
PHGDH-218ENST00000641491 NECTIN2Q92692 538 aa16.59■□□□□ 0.25
PHGDH-218ENST00000641491 SMC4Q9NTJ3 1288 aa16.59■□□□□ 0.25
PHGDH-218ENST00000641491 ZNF330Q9Y3S2 320 aaPredicted RBP16.59■□□□□ 0.25
PHGDH-218ENST00000641491 NUP188Q5SRE5 1749 aa16.59■□□□□ 0.25
PHGDH-218ENST00000641491 ITGB4P16144 1822 aa16.59■□□□□ 0.25
PHGDH-218ENST00000641491 VIRMAQ69YN4 1812 aaKnown RBP16.59■□□□□ 0.25
PHGDH-218ENST00000641491 AK7Q96M32 723 aa16.58■□□□□ 0.24
PHGDH-218ENST00000641491 RCAN3Q9UKA8 241 aa16.58■□□□□ 0.24
PHGDH-218ENST00000641491 KDM3BQ7LBC6 1761 aa16.58■□□□□ 0.24
PHGDH-218ENST00000641491 SIPA1L3O60292 1781 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms